1YUA,1YUA


Conserved Protein Domain Family
Topo_Zn_Ribbon

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pfam08272: Topo_Zn_Ribbon 
Topoisomerase I zinc-ribbon-like
Some Proteobacteria topoisomerase I contain two zinc-ribbon-like domains at the C-terminus that structurally homologous to pfam01396. However, this domain no longer bind zinc. Indeed, only one of the four cysteine residues remains.
Statistics
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PSSM-Id: 462415
Aligned: 46 rows
Threshold Bit Score: 43.0375
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1YUA_A        81 GNKTMVrfSRK-TKQQYVSSekDGKATGWSAFYVDGKWVE 119
BAJ02741     766 HLPDVK--CTK-SDGYFVLR--DGAAGIFMAASTFPKSRE 800
Q6LPB7       761 HLPEIP--CTQdSNAYFVLR--DGASGLFMAASTFPKSRE 796 Photobacterium profundum
BAN96396     220 pLPELP--CEK-SDAYFVLR--DGAAGVFLAANTFPKSRE 254
Q0VQT8       776 PMPHLQ--CQK-VDDHYLLR--DGASGLFLAASKFPKNRE 810 Alcanivorax borkumensis SK2
WP_013261363 774 pMQHLR--CQK-HDDFYLLR--DGASGLFLAASQFPRHRE 808 gamma proteobacterium HdN1
Q6FET8       774 KMEHLR--SVK-HDDYFVLR--DGAAGLFLAASKFPKIRE 808 Acinetobacter baylyi
1YUA_A        14 PLPELP--CEK-SDAYFVLR--DGAAGVFLAANTFPKSRE 48 
RZA23825       8 KMPELK--CEK-VNDTYVLR--DGASGLFLAASQFPKNRE 42  Proteobacteria bacterium
WP_137169710 764 pMPDLA--CQK-VEDHYVLR--DGATGLFLAASQFPRKRE 798 Marinomonas sp. FW-1
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