Conserved Protein Domain Family
Rod_C

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pfam10493: Rod_C 
Rough deal protein C-terminal region
Rod, the Rough deal protein, displays a dynamic intracellular staining pattern, localising first to kinetochores in pro-metaphase, but moving to kinetochore microtubules at metaphase. Early in anaphase the protein is once again restricted to the kinetochores, where it persists until the end of telophase. This behaviour is in all respects similar to that described for ZW10, and indeed the two proteins function together, localization of each depending upon the other. These two proteins are found at the kinetochore in complex with a third, Zwilch, in both flies and humans. The C-terminus is the most conserved part of the protein. During pro-metaphase, the ZW10-Rod complex, dynein/dynactin, and Mad2 all accumulate on unattached kinetochores; microtubule capture leads to Mad2 depletion as it is carried off by dynein/dynactin; ZW10-Rod complex accumulation continues, replenishing kinetochore dynein. The continuing recruitment of the ZW10-Rod complex during metaphase may serve to maintain adequate dynein/dynactin complex on kinetochores for assisting chromatid movement during anaphase. The ZW10-Rod complex acts as a bridge whose association with Zwint-1 links Mad1 and Mad2, components that are directly responsible for generating the diffusible 'wait anaphase' signal, to a structural, inner kinetochore complex containing Mis12 and KNL-1AF15q14, the last of which has been proved to be essential for kinetochore assembly in C. elegans. Removal of ZW10 or Rod inactivates the mitotic checkpoint.
Statistics
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PSSM-Id: 463114
Aligned: 15 rows
Threshold Bit Score: 625.162
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007489958        1580 TMTMSSAAQIRLPFHLIFfgKVQNFWKILSAELREESFPTFLLIAKLMKVSLDS-LYVSTVK-QVFEKSLKPKLLKQVQA 1657
XP_002935241        1603 GIAMPPTAQTRLPFHLLFftTASSFWGIISAELSEESFPTLLLISKLMKVSLDT-LYMMASK-HVFEKNLRPKALKLKNA 1680
XP_008118075        1576 GMALPPAAQTRLPFHMIFfgASNYFFKIIAAELSEDSFHKLLLMSKLMKVSLNT-LYLLAAD-HLFQQKLKPKILDAMRS 1653
ETN63171             986 GDMLPEIAKYRYPFMLIV---RQPLKQLLKEEIAIDNYQKLLVLVE-MKCALEG-FDCNEMN-DNFCKSAVVNSINEYKI 1059
WGS:AAQB:GK11720-PA 1537 S-VLPKIAQYRLPFKPIV---EKPLKDILDYDINVDNCQSWFPLIQ-MCTALKG-SKDSPQNcDYFCMSAVKNSMDELKC 1610
WGS:AANI:GJ23087-PA 1543 G-VLPKIARYRLPFKPIV---EKPLKDILDSELNVDNCQSWFPLIL-MCTSLKN-SKDISQNcDYFCMAAVKNSIAEYKS 1616
XP_014339601        1560 AICLSSASQQRLPFHLLFfnTTQCFWNIISAEITDESFPTLLLISKLMKTGISThMLLILGAdk---------------- 1623 coelac...
XP_011613979        1570 GLLPNPLSNRRLPFHLLM--QNKHYWKIISPELSEETFPTLLLISKLMKVSLDK-LYMSAAN-HVFeKKMKPLLLEQRKK 1645 torafugu
XP_014324173        1571 GLMPNPLSSSRLPFHLLM--QTKHFWKIIsPELSEETFPTLLLISKLMKVSLDK-LYMSAAN-HVFEKKMKPLILEQRKK 1646 southe...
XP_015221522        1550 SLPRSPLTHTRLPFHLIFfkTSLYFWKIISAELSEETFPTLLLISKLMKVCLDK-LYMSAVN-HVFDKRLKPQSLKPSNG 1627 spotte...
XP_007489958        1658 KGSTPN--------NKEIAKTFQTLQSYLLSIANPEWAVAVAINLAQDIPEGCYKItiLKFCLYLAEKWLKNISS----- 1724
XP_002935241        1681 EHFSII--------NKDTAKTVLTIQSYLQSISNPEWAAAIAHKIAQELPTGPDKIhaLKFCLHLAEKWKKNILP----- 1747
XP_008118075        1654 ECWEAV--------DKETAKIVQTITSYLHCITNPKWATGLAYKMAEELPPGPMKVqaWEYCIGLSRQWLTSTTL----- 1720
ETN63171            1060 QNKEMAlahndwhrQAKNKAFLQSILRIVDSIKDLSSRLFILYYITCNASDGDDQVnaAYACYTFARKHETELAS----- 1134
WGS:AAQB:GK11720-PA 1611 KSNSDAws-----lRPTNNAFLQAVLRLAKNMNSHNKAFLMLYYVSNYVRSGADQVeaAYECWKFAKKH-ALQLN----- 1679
WGS:AANI:GJ23087-PA 1617 KNDSESws-----lHPTNNAFLKSILRLVKNVHSPSKVFLILYFVAGYAPEGADQVeaSYECWKYAKDH-GSLTN----- 1685
XP_014339601        1624 ------------------------vGTSALEFRKFHCLFSL--------VAGPEKNyaLKFCMHLTQKWQDSLTP----- 1666 coelac...
XP_011613979        1646 GHGHFY--------NKETLKVAKAMMTYIHCIQSAEWAAATAHRITQELPPGYEKTqsLRFCLALGDAWLKDPNL----- 1712 torafugu
XP_014324173        1647 AQGHGY--------NKETLKVAKTMMKYIQCIQSLEWAAATAHKITQELP------------------------Pglekt 1694 southe...
XP_015221522        1628 RKPHVM--------TKETIKTMETIKTYLLSIKNPEWAAAAAHKIAQELPTGILKTtsLNFCLLLAEKWLKTSSP----- 1694 spotte...
XP_007489958        1725 -------------------QDETHEKAEALLKKLRVQYQRSGTETVLITHGLGSPEHLRLLGKPAQLIASLYEHGSILPR 1785
XP_002935241        1748 -------------------KDDAHEKADVFIKKLSVQYQRSATENVLITHKLNTPEFLKQIGKPANLIVSLYEHSSVEQR 1808
XP_008118075        1721 -------------------TDELREKAEESLKKLQVQHRHSATEAVLMVHKLNSEEHRKLLGAPGKLIVSLYQHSSIPES 1781
ETN63171            1135 -------------------MPEAKEK----LEKIFRKYPLLKTQQLLQQNGVTEEKQFQLVRNPHELIMALYSDSCFQQV 1191
WGS:AAQB:GK11720-PA 1680 -------------------DPMVKEK----VIKIRSKYPKQKTMLLLHTYGLTDEKLLQLVSDPRELISSLYHNDLIIKS 1736
WGS:AANI:GJ23087-PA 1686 -------------------DPKCQDQ----LAKIKRRYPIQKTQHLLYVYGMTDEKLLRLVEHPIELIHSLYHHELILKS 1742
XP_014339601        1667 -------------------QDEAREKAGFLLNKLTVLYQRSATENVLIAHSLNSAQYLKLTDMPSKLIESLFGHDSIEQR 1727 coelac...
XP_011613979        1713 -------------------EEAARARGETFLSKLKLQFQRSATENALISSQLNSPELLKLTGLPARLIVALYEHSRLEQY 1773 torafugu
XP_014324173        1695 qslryclglgeawlkdpnlEEAARARGETFLSKLKLQFQRSATENMLISSQLSSPELLKLSGLPARLIMALHEHSSVEQR 1774 southe...
XP_015221522        1695 -------------------EDPAHAKAEIFLEKLKLQYQRSATENTLISYHLNSPEYLKSTGFPAKLIVSLYEHSSIEQR 1755 spotte...
XP_007489958        1786 IQGPADKDCPDIHAAAKEIAEINNLDLEKIWDVLLEKWLCPATQT-----NEIPSEF----F-NLQ-------------- 1841
XP_002935241        1809 IRYPTGRDYPDIHMAVKQISEVNNLNMSRICTLLLEKWICPPALPq----ADKSKDV----FgDIH-------------- 1866
XP_008118075        1782 FQDPMGRDYPDVHAAAKEIAKINDLDMTTIWNVLLEKWLCPSELP-----TDKTSGA----FgNIQ-------------- 1838
ETN63171            1192 ----------KVNELVSVIGELYELDIEGIQMQLLQKWLTIFGGTtsensASMLEET----LyDDHnmsdas------qe 1251
WGS:AAQB:GK11720-PA 1737 GTI-------DINALVKEIADLHELDLDAIQFSLLQKWLSVTMEQt---dVTVHEET----LvEDPfgtpndgidavngl 1802
WGS:AANI:GJ23087-PA 1743 SKV-------DINALVKEICALHELTLSNIQFKLLQNWLSVTMETt---dGTILEET----FlEDQnwpehgsn--ghgd 1806
XP_014339601        1728 VRNPIGRDYPDIHAAANEVAEINNLHMNKIRDVLLEKWLCPSTQPvv--dGKKTQDF----FsNIQ-------------- 1787 coelac...
XP_011613979        1774 YRDSGGQICPDIHAVVKEIATINNVDLLKIRNMMLEKWICKTGPAvt--kDAGNYES----VsNIE-------------- 1833 torafugu
XP_014324173        1775 YRETGGQTFPdIHAAVREIATINNVDLGKIRNMLLEKWICKTGPAvtkevgnqdcv------------------------ 1830 southe...
XP_015221522        1756 LKNPAGRNYPDIHAVAREIASINNIDLSKIRDLLLDKWLCQSTAP-----AVKDNNTqhyvT-DIQ-------------- 1815 spotte...
XP_007489958        1842 ----GDEALQRVLYLLQIRPIDYSSRMLFLVATSSVSPFTVG-----QLTFAYRRRALHCLLCLADRETIESLFKKPYEE 1912
XP_002935241        1867 ----GDEDLRRVIYLLQPYPVDYSSRMLYAIATSATSPIGDN-----QLTYAHRSRALQCLIHLADTDTVVSLIKKPIDE 1937
XP_008118075        1839 ----EDEDLKRVIYLLQAHPEDSRLRILHRWTVSEISPVGLN-----QLSFAHRSRALKCLLYIADPPAVESLFKKPVEN 1909
ETN63171            1252 deegVHEYMKRAYYILSSWERSKSVEFLVAQLNTSTDGVS--------SDVGKQLHIYQCFSKLVDEECN--PYQTFFTQ 1321
WGS:AAQB:GK11720-PA 1803 tvniTSENVIRAVYVLSSWPKSDAVKFLIGFIFKGGS-----------VNTSTQLQMYECFLKLNDGSN---IFADIITQ 1868
WGS:AANI:GJ23087-PA 1807 dtgnASENVVRAFYLLSSWPKSEAVQFLVGLIFKGGP-----------VNTSTQLQMYECYSKLNDGSN---SFSNTINQ 1872
XP_014339601        1788 ----EDPELIRVLYLLQPYPLDYSTRILFAIATSATSPISVV-----QLTFAHRSRALQCLIHIAGTEAVVALFKKPIEK 1858 coelac...
XP_011613979        1834 ----EDPDLMRVVYILQPYPMDDAVCLLKPILSAETWPLSSSg---pRLTFCHRTRALLCLVRLADAATLDTQFHISRNK 1906 torafugu
XP_014324173        1831 tnieedpdllrTVYMLQSYPVDVATRLLSPILCAETW---PLsssgpRLTFCHRTRALLCLIRLADAESLEAQLQIPRSK 1907 southe...
XP_015221522        1816 ----EDPELMRVIYLLQMYPMDFSARMLYAIVTAEVSPISNSg---pRLTFGNRSRALMCLIQIADTKTLESLLKTSIEK 1888 spotte...
XP_007489958        1913 VKCF-LKCITFLAAFEMLNIPLTYESFHNS--PKEGMIKGLWKNHSHEPMAVRLVTELSLEYKVYDTQLWSGLLQKLLGF 1989
XP_002935241        1938 VKYY-LKCCIYLSEFEFLNIPYTLESFHSS--PKEGMIKGLWKNHSHEPRAVKLVTELSLEYKVYDPQLWGGLLQKILGF 2014
XP_008118075        1910 VKQF-LKCLIYLAEFEVLNIPYTYESFHST--PKEGLVKGLWKNHSHKPMAVKLMTELSLDYQVHDAQLWNGLLQKLMSF 1986
ETN63171            1322 QRYVaLKCVHLLKSLGLGNL--SIAKFEET--DKMALLKMLWQSHASNPKGLEVIALICIGYNIYLPQIWNGILKQMARL 1397
WGS:AAQB:GK11720-PA 1869 KQFItIKCVDDLKALGYNC---NIDKFKDDqcNKIDILKMIWQRNAQNPLSLVVMANICLGFDIHLPKIWNGILKRMVIF 1945
WGS:AANI:GJ23087-PA 1873 REFItIKCVHKLKALGYNS---NIEKFADDncDKINILKMVWQRNAQNPLSLEVMADICLGFDIHLPKIWNGILKRMVIF 1949
XP_014339601        1859 VKYY-LKCCIYLAEFEILNIPYTFESFHSG--PKEGMIKGLWKNHSHEPRAVRLVVELSLEYQVFDPQLWNGVLQKLLGF 1935 coelac...
XP_011613979        1907 IQYY-LKCYIFVSQLEALNIPYTVQSFLSS--PKEGLVKGLWKNHSHEPQAVRLVADLCLEYQVYDPQLWNSLLQKLLSF 1983 torafugu
XP_014324173        1908 FkCY-LKSYIFVSQLEALNIPYTIQSFLSS--PKDGLVKGLWKNHSHEPQavrlvadlcleyqvydpqlwnsllqkllgf 1984 southe...
XP_015221522        1889 IKHY-LKYCIYLSEFEVLNIPYTVESFHSS--PKEGMIKGLWKNHSHEPRAVRLVAELSLEYQVYDPQLWNGVLQKLISF 1965 spotte...
XP_007489958        1990 NMISYLRNVLTAISNIHSLWQIPYFGRAWQRVSQIPLISASCPLNPTQLLACRESLVVLLECPVSMDLDMIGVAKQFSQL 2069
XP_002935241        2015 NLMHYLRKVLVAISGVHCLWEIPNFSRAWRSAILSPFITASCPPSPSQMEECYECFVVLLKCPVLADLDVVGIAKQYAQI 2094
XP_008118075        1987 QMISHLRKVLREISGICSLWQIPNFSRAWQTVICAPLLSAVPPPSPGQLEACCDSFRLLLMCPLTTHLDLLGIAKQYVQL 2066
ETN63171            1398 GMVANLRALIDIVTAKRQLFGLEGYRMAWELLIEQPFRSASREQSLAEDALLARSLVMVQRCPISFRLNLLEIARECVTV 1477
WGS:AAQB:GK11720-PA 1946 HMIQELNALLDELSCKAQLLHLDGLAVAWDYVLCHPLKNASHTHSFEQDEQLHKVLLRLQGCPVVHALNLQQFAQHCKLI 2025
WGS:AANI:GJ23087-PA 1950 NMVRELNALVDVLSCKPQLLHLDGLALAWDCVLTHPLKNAVQTRSIALEERLQKTLLRLQGCPVVDALNLYQFAELCMLI 2029
XP_014339601        1936 NMISYLRKVLVAITGVQSLWPIPVFSRAWRSAILAPFLSASCPPSPKQLEACYESFVLLIKCPVLGDLDLVGIAKQYVQL 2015 coelac...
XP_011613979        1984 NLISHLQGVLEAVVSVPALWEIPSFSRTWRSTILAPFVSASLPLSPDQQKTLYRSFVLLLKCPFLLDLDLVGIANRFAQF 2063 torafugu
XP_014324173        1985 nlISHLQMVLEAIVAVPTLWEissfsrtwrsmilapfvsaSVPLSPDQQAMLYRTFVLLLkCPFLLNLDLIGIANRFAQF 2064 southe...
XP_015221522        1966 SMTCYLRKVLVALTAVHSLWQVPNFIRAWKSVILAPFLSASIPLSPQQLEMFYQTFVLLLKCPVLFDLDLIGIAKQFAQF 2045 spotte...
XP_007489958        2070 ELPAFALACLLLMPHSDKRDQQLQNFLGWCNPEVILQQIDEHMNTGQLAGFACQVKGFIL 2129
XP_002935241        2095 DLPAFTLGCLLLIPHMEKREQQIQGFLSTCNPETVLQQVADCMNTGEVAGFASQIRDLIL 2154
XP_008118075        2067 QLPAFAFGCLLLIPQLEKRSQVIQDLLAKCSLEAMAQQVDEYMSWGEVAGLASQIRHLML 2126
ETN63171            1478 NRVNMA--AVLIGFADSEQKETLKKLIANNAVPNLKDQIQEL----EEFGLVTTITKAVC 1531
WGS:AAQB:GK11720-PA 2026 QRPHMA-AALLAFCQSSQQREDIKKLILSRPMDNLREQILDL----EDAGILPVILDFAL 2080
WGS:AANI:GJ23087-PA 2030 HRPHMA-ATVLIYCQSTEQREKIKKLITSRHVDNLRQQILEL----EDAGLIPMVLNFAL 2084
XP_014339601        2016 DLPAFAVGSLLLIPYSEKREQQIQGFLSLSNPETVLQQVVDHMTTGEVAGFASQIKKLLL 2075 coelacanth
XP_011613979        2064 SLPAFALGTLLLIPSAQKKAQQIQGFLSVCNPVAVLEQVDELMNTGELAGIPSQISKTVL 2123 torafugu
XP_014324173        2065 NLHAFALGTLLLLPCANKKAQQIQGFLSMCNPVAVLEQVDEFMNTGELAGIPSQIRETVL 2124 southern platyfish
XP_015221522        2046 DLPAFTLGSLLLIPCSEKKEQQVQGFLSSSNLVTVLQQVEEHMNTGEVAGFSTQIKDMVL 2105 spotted gar
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