Conserved Protein Domain Family
Bunya_NS-S_2
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pfam03231: Bunya_NS-S_2 
Bunyavirus non-structural protein NS-S
This family represents the Bunyavirus NS-S family. Bunyavirus has three genomic segments: small (S), middle-sized (M), and large (L). The S segment encodes the nucleocapsid and a non-structural protein. The M segment codes for two glycoproteins, G1 and G2, and another non-structural protein (NSm). The L segment codes for an RNA polymerase.
Links
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Statistics
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PSSM-Id: 251815
Aligned: 9 rows
Threshold Bit Score: 500.038
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
O55842   4 MNSEKGKiiipke-------ydpeyCRQALLSHGSQvEKASSLDVYTIYE--KNTLAFESIHITNPKFKVSSGYGTSGYV 74  Peanut yellow spot virus
Q5G1B3   1 MSTAKMS------------------AVEFSKTYGTK-DSRSVNDCYSVYSg-TGINFLNLFMHTNTGIKSAFSVNDLARN 60  Calla lily chlorotic ...
Q2I0F6   1 MSTAKSA------------------ASEFVKSYGTR-DNRAINDCYSVFSg-EGVNFLSLFMHNNAGIKSAFSINDLGRN 60  Capsicum chlorosis virus
Q88928   1 MSTAKNA------------------ASEFIKSYGTR-DNRAVNDCYSVFTg-EGVNFLNLFMHNNAGIKSAFSINDLGRN 60  Watermelon silver mot...
Q91QP5   1 MANAYLT------------------AVGYVKAYGSK-DKKAVNDCYAVFNg-EGTNILNLFMHSNSGVKSAFSINELGRN 60  Melon yellow spot virus
Q0GY53   1 MSTVKTT------------------AVEFFSNYGIScDSRSSNDCYRIFSg-EGKTLMDVFMHSTIGIKPAFSIGNLGRN 61  Tomato yellow ring virus
Q9YUD6   1 MSTESSNpgstenvalipepfdeqyCEEALTSYGNNlDKSALVDVYSMFE--DDKLVFQSIHATNGRFKATCAFGHSDMV 78  Peanut chlorotic fan-...
Q06B65   1 MSSSVYEs----------------iIQTRASVWGSTaSGKAVVDSYWIHElgTGSQLVQTQLYSDSRSKSSFGY--TAKV 62  Tomato spotted wilt t...
Q76D18   1 M----YEt----------------iIKSKSSIWGTTsSGKAVVDSYWIHDqsSGKKLVEAQLYSDSRSKTSFCY--TGKV 58  Impatiens necrotic sp...

O55842  75 LNKDKvdasaedlklhNLETSTDSQDFYDSFNGpsgVDSTISLTGPEIVITISHPKQSAYAYKHNFHGRIAVNGEAKAMI 154 Peanut yellow spot virus
Q5G1B3  61 EDVKI-----------HEAEVINSLHSYNYFEK---FGLDIILCSHIMDIIVTKPNVKNTGCKFQMHNQIFNPNEDTLAK 126 Calla lily chlorotic ...
Q2I0F6  61 EDVKI-----------HEAEVIDTCHDYNYFEK---FGLDITFCEHEMRLVVKKPGIKNTGCKFSMHNQIFNPNNDTLSI 126 Capsicum chlorosis virus
Q88928  61 EDVKI-----------HEAEVVDSCHDYHYFEK---FGLDITFCEHEMNLIVRKPGVKNTGCKFTMHNQIFNPNSNILNM 126 Watermelon silver mot...
Q91QP5  61 EDMKI-----------QEAETLTTLHDQKFFDH---FGLDIIFCGHVLNVIVRKHDVSNIGCKFSQHNLIFCPNEETLDF 126 Melon yellow spot virus
Q0GY53  62 EDIKA-----------NEAEIIDEHHNYDIFDK---FGLDINFCNHFMEITVKKPSVKNYETKFQMHNQIFEPSSNLLKQ 127 Tomato yellow ring virus
Q9YUD6  79 LDSEQ-----------ELKTSISSEIFHQEFDAisgINSIISLQGENIHVIISHPEQKVKSYKYAFHGRIASN-DVFPRI 146 Peanut chlorotic fan-...
Q06B65  63 GDLPC-----------EEEEILSQHVYIPIFDD---IDFSINIDNSVLALSVCSNTVNANGVKHQGHLKVLSP--AQLHS 126 Tomato spotted wilt t...
Q76D18  59 GFLPT-----------EEKEIISENVFVPIFDD---IDLNFSFSGDVVEILVRSNTTNTNGVKHQGHLKVLSS--QLLRM 122 Impatiens necrotic sp...

O55842 155 SDF--------KEFVDVYSSNPYNFLYNPKILNIEETSSTILFPVEQIGTLPSTiSVFGRYfdkNHFSVVDANKYMSVKA 226 Peanut yellow spot virus
Q5G1B3 127 TPGvi----seEDFYEISKIKLKGLTPFGWYVDECKKHDFYISNSGDISLDYGF-PVMGKT---TSYWRENLPREKIISV 198 Calla lily chlorotic ...
Q2I0F6 127 VPTti----qeEVFHEKSKIRSNDLLPSDWCLDEFWKNNFYIATNGEFSLDYGF-SVMGKT---TSYWRENISREKILSF 198 Capsicum chlorosis virus
Q88928 127 TPGti----seDAFYDRSKITSSGLLPSGWCLDECYKNNFYIATNGDLTLDYGF-SVMGKT---TSYWRESMSREKILSV 198 Watermelon silver mot...
Q91QP5 127 TPTdkglslseEEFFKATKITSEDFHPQGWCIEECKKNRFTVAETSCLELNYGS-PVMGKT---VAYWRENISGEKLVTV 202 Melon yellow spot virus
Q0GY53 128 GVGkm----seTDFYSCSNLSKDDMYPSEWFINEARRKNFFMADVSGFNLDYGF-SVMGKT---TSYWKENMDKTSLISV 199 Tomato yellow ring virus
Q9YUD6 147 SGF--------DEFRSQYSCNPYKFVYNPGMLGLESETNTVIFPVEKLGTLPAHaSAFGNNfdrCHFSGSSVPGFMTVKA 218 Peanut chlorotic fan-...
Q06B65 127 IESim----nrSDITDRFQLQEKDIIPNDKYIEAANKGSLSCVKEHTYKIEICYnQALGKV---NVLSPNRNVHEWLYSF 199 Tomato spotted wilt t...
Q76D18 123 FEEqi----avPEITSRFGLKESDIFPPNNFIEAANKGSLSCVKEVLFDVKYSNnQSMGKV---SVLSPTRSVHEWLYTL 195 Impatiens necrotic sp...

O55842 227 VSDGAKYSNQGSHRQLHNKNLKAIEIAsvSGIMPNtiSKTTMQTKKNCTVYIQVQVlDPSCKPEKKECLIQ----AKDDP 302 Peanut yellow spot virus
Q5G1B3 199 KQKCVPNVSALTNRILPLPTVKAIQIA--SELASE--KTVVLASRQRLDIDVKSQY-RVSFPGIQDEGAFTrtfcIPMDN 273 Calla lily chlorotic ...
Q2I0F6 199 KHKSLPDNTVPTNRLLSTSIVKGIQLG--SELAPE--TTVILSCKQNLDIDLKSQY-RISFHGIQEEGAFTrtfcIPFEN 273 Capsicum chlorosis virus
Q88928 199 KQKCFSDNTVPTNRLLSTSTVKGIQIG--SELASD--TTVILSCKQNLNIDLKSQY-RISFHGIQEEGAFArtfcVPFEN 273 Watermelon silver mot...
Q91QP5 203 KPKCINVPTALPNRLLPSSTVKAIQIG--SELAKQ--ATVVLSARQSLSQDLKSQY-RVTFPGVLEDLAYSrsylVPFGA 277 Melon yellow spot virus
Q0GY53 200 KQKSMNNPLVPTNRLLSASTIKAIEIA--SNIACN--KSTILAVKQDLTSDLKTQF-RISLPGEYNETAIArtflINQGK 274 Tomato yellow ring virus
Q9YUD6 219 VSESSKRTQEKAHRQLHNKSLKALEIVsnSDFRSTyiTKTTLKARKNGMMTIQVQV-KISTASLKREHLIA----IPDDP 293 Peanut chlorotic fan-...
Q06B65 200 KPNF--NQVESNNRTVNSLAVKSLLMSaeNNIMPN--SQAFVKASTDSHFKLSLWL-RV--PKVLKQVSIQklfkVAGDE 272 Tomato spotted wilt t...
Q76D18 196 KPVF--NQSQTNNRTVNTLAVKSLAMSatSDLMSD--THSFVRLNNNKPFKISLWM-RI--PKIMKSNTYSrfftLSDES 268 Impatiens necrotic sp...

O55842 303 YQRLVYCKSECLGQTKPGISTFLFKIICLDCTqSEVSHPTTYfagALSTCLDLeempslVRPASANLNaMVDTDREkINE 382 Peanut yellow spot virus
Q5G1B3 274 TARIICFYAKTSVDSSNERTTLTIKIVNKTIE-NNCPGPIPK---DHIYCDKS------IGARIGLVD-VVRGDPN-YNL 341 Calla lily chlorotic ...
Q2I0F6 274 KSRIICFYAKTVADNSNERTTLIIKVVTKTID-SHLMIPI-R---NHINCSRL------VGARIGLVD-FCDADPN-YNQ 340 Capsicum chlorosis virus
Q88928 274 KSRMISFYAKTVADNSNERTTLIIKVVTKTVD-SHLVIPI-R---NXINCEKK------IGARVGLVD-FCDSDPN-YNQ 340 Watermelon silver mot...
Q91QP5 278 KNRIIRFDSRTISDRENEQTTLILKTSTKTIE-SNFINRA-Q---EHKNCIKS------IGERLGLVD-FIVSEPN-YSQ 344 Melon yellow spot virus
Q0GY53 275 KGQYICIYAKTVMDRSNERTTLIIKVVTQSRPgEYISTLLPK---DHSDCRRV------VGASFGIVE-QKPTDPN-YNK 343 Tomato yellow ring virus
Q9YUD6 294 LKRLVYCSSECLGQTSPGLSTFIFEVMCLDCLvDRVTPDVTYfagALSTCFTDepphilLKARSGILSsLADSDRDkINE 373 Peanut chlorotic fan-...
Q06B65 273 TNKTFYLSIACIPNHNSVETALNITVICKHQL-PIRKCKAPF---ELSMMFSD------LKEPYNIVH-----DPS-YPQ 336 Tomato spotted wilt t...
Q76D18 269 SPKEYYISIQCLPNHNNVETALNITLISKLLL-ESTPSSSDH---KIEMNFSD------LKEPYNVIH-----DMS-YPQ 332 Impatiens necrotic sp...

O55842 383 IICKNLVAVHLELAQDISKKLNKPINVFTIKDtSNMTGDTVDVNGKKFRILKDSSGDCYFTSATFEktfigAYKSCQTFI 462 Peanut yellow spot virus
Q5G1B3 342 MIAREMVSVHTNFALKLSESLKKPVIVFKMYD-KELNFETYDLSGRSLSYQKDSSGNIYFLSKTLE-----ILPKSLSTL 415 Calla lily chlorotic ...
Q2I0F6 341 MIVKELLGVHTQFAMNLSGALKKPIIVFKMYD-KELINGHVEVSGRVLNYQVDADGNIYFLSKTLE-----VLPRSLSTL 414 Capsicum chlorosis virus
Q88928 341 LIVKNLLSVHTQFAINLSEVIQKPVIVFKMYD-KELHNDYTEVSGRILNYQVDSERNVISSQRLLR-----FCPKSLSTL 414 Watermelon silver mot...
Q91QP5 345 IIASDFLRLQTVLSLRVSKHFKKPVIVYKLYD-KETELKKAKIDGKFVSYNEDSEGNVYVLNKTLD-----LFPKSNSSF 418 Melon yellow spot virus
Q0GY53 344 IIAHELLSVHTNFALKISKVLKKPVIVYKIYD-KELLPKKVEIDGRTFNYQEDIDGNVYFLSTTLA-----ILPLSVSVL 417 Tomato yellow ring virus
Q9YUD6 374 IICKNLVSVHLGLATDLAKKLNKPINVFTIKDtSSMTTDMVEVDGKKYRVLKDSNGDYYFTSATFEktligAYKSCQTFV 453 Peanut chlorotic fan-...
Q06B65 337 RIVHALLETHTSFAQVLCNNLQEDVIIYTLNN-LELTPGKLDLGERTLNYSEDAYKRKYFLSKTLE-----CLPSNTQTM 410 Tomato spotted wilt t...
Q76D18 333 RIVHSLLEIHTELAQTICDSVQQDIIVFTINE-PDLKPKKFELGKKTLNYSEDGYGRKYFLSQTLK-----SLPRNSQTM 406 Impatiens necrotic sp...

O55842 463 DYCDSK-----KLSINGDNVFIF 480 Peanut yellow spot virus
Q5G1B3 416 TYLKSIspacwKESISMQHFYVG 438 Calla lily chlorotic spot virus
Q2I0F6 415 SYLNSVaptlwKESLEHQHFIVE 437 Capsicum chlorosis virus
Q88928 415 SYLGSIapiqwKECLEHQHFVVK 437 Watermelon silver mottle tospovirus
Q91QP5 419 VYLSRTmspfwKEFPFEQHLVVD 441 Melon yellow spot virus
Q0GY53 418 FYLESAspscwKESRGLGHFTVE 440 Tomato yellow ring virus
Q9YUD6 454 DYCDNK-----KLSINGDNVFIF 471 Peanut chlorotic fan-spot virus
Q06B65 411 SYLNSIqipswKIDFARGEIKIS 433 Tomato spotted wilt tospovirus
Q76D18 407 SYLDSIqmpdwKFDYAAGETKIS 429 Impatiens necrotic spot virus
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