Conserved Protein Domain Family
RecD

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COG0507: RecD 
ATPase/5#-3# helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V) [Replication, recombination and repair]
Statistics
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PSSM-Id: 440273
Aligned: 802 rows
Threshold Bit Score: 142.423
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_094060503   31 LSAWQQA-----------Q------------WLRpld--------------------------------csF--AQLI-- 51  
WP_013627490  371 wssyqpvrrellefltrfEltpq----qvkrVANtnlrakagidatdeqiianpyllsemdqggadseaitLeaIDRGmr 446 
WP_013898592  370 avkrwsaypssrrkllallvrfeltpiqvrrivdpnernnsgidatddelvenpylisemdqggpdrdiislevidrgmr 449 
WP_109760403  398 ltlftltprqvgrilfpedgdphafaglalspddiaanpyvlaesyvpatrnarneredldreqrsdaaidygvidigmf 477 
WP_111524015  449 vkkvdravfpissimekyPle----------------------------------------------------aPSKLss 476 
WP_062542953  517 dgklrlsgtwirnfeedvrkshevqdiisnpyilcedyepwadshdnvygeerdspislfkidiaffphtrfvhrntLq- 595 
WP_079285282  354 hvkdlfegrrqpeadyahslaeailcwrkmpsrhklidllvrfelttdqiadilnedtrkqrgilatndailenpyrlfe 433 
WP_011157813  502 alisdmlehavqneghtllprswivsratgapldprcvvdedvidmvadylaltletartsddelalklrrygasrtait 581 
WP_106788971  391 awkkmkpdrkslfkllsrfaltllqastlfdlsarekagiicsdneivenpyiiyektrllnadlvisvkrvdraifpvp 470 
WP_010871043  340 IDKFIAQkeefreflknyAvyyelsafklekIKEqyekefinldniiknpy----ilvedlkendsferiiFeeLDSW-- 413 
WP_094060503   52 --VEleke-----qgrgVEP--LvllLA--ALTSYQVGRGHVCiDLAALvndsrqalalspdeerswqtletqtlPQHAL 120 
WP_013627490  447 peGEaahfikadaicaqDDPrrVr--ATaaSVLNLAAVQGDTLlPFNETln-----------------------rIEERF 501 
WP_013898592  450 peGDaarflpaddiipqDDTrrVr--GCavSILKEAAANGDTLlPFSEVie-----------------------rIRKLF 504 
WP_109760403  478 pdhrhlerrddlhdltvTGPerLr--AFvyEALTAAEAQGHSFvSTGTLvehaar----------------hplfyRDKL 539 
WP_111524015  477 ----------------dNDErrVr--ALaiAVMEKAASNGNTImPCANLve-----------------------eMKNQV 515 
WP_062542953  596 --ASmn----------fVDPkrLr--ALtlKFLHSLEQFGHCFaDAEMLeialrey------------plyyelgGEYRL 649 
WP_079285282  434 qdcgtkrsapvslevidqgmlpegdaarfrtdpplpphdhrrvratmvavlqraasagdsllpfptlvqraasffpesrr 513 
WP_011157813  582 savhkrvggkrhsivhkwralvdavlppmeagpeaeveE----------------------------------------- 620 
WP_106788971  471 eiiskypieapsaltsdNDWrrVr--AMavDTMEKAALEGHTImPCTMLid-----------------------rIKALV 525 
WP_010871043  414 --ERrrlgd----kfnpYSPyrVr--ALlvEILKRHLSSGNTTiSTKDLk------------------------dFFEKM 461 
WP_094060503  121 Ahl----slNDCLEA----LQRs-vAVsdGSevtPLV---Lq----gQRl---YLRRLWRYEQTiaANIAARlSar---- 177 
WP_013627490  502 perrtctpdPDLVAGqaafYQ-------------ELLd--YqvedehPTf---AIKNLADVEAEvrSRLKRLvKrtn--- 560 
WP_013898592  505 perraclpdSELVLGqqsfYQ-------------EVId--FhtdsnpPTm---ALKILSELEQEvsRKLLRRvKkkn--- 563 
WP_109760403  540 NvneaqflsNEHLAH----FRe------------RMH---IenvdgtHYf---YLQRAWHAEQIvtRFVCERlKlpaltr 597 
WP_111524015  516 ldpa-chvtEDIVKAiekfMLL------------EIIk--RemkdgtEYy---KLVRFQEFDDIieKRISRRlNapk--- 574 
WP_062542953  650 PsrlfnpiqSEYSNH----FQA-------DPk--KIV---IieandtSYf---YLKEVYEAEKSieGRLLSLlKshdnse 710 
WP_079285282  514 caadaetiwssedrtfheqilwfrdapapeswkradadaaadgaddelaelredlgaakptegerpilrlaalksvrrwe 593 
WP_011157813      --------------------------------------------------------------------------------     
WP_106788971  526 lepe-ctvtSDIMDAidplLRS------------ELIr--RemkdgtEYy---KMVRMNEFDQIieKRISRRlRapk--- 584 
WP_010871043  462 DkdivkitfDEFLRI----IEEykdII--SEk-vEIVkkeVknnenkEIielfTLKEIREYEEIieNTINYLlKska--- 531 
WP_094060503  178 ------aeLlsadseQA-VtlsqaLAQ-----------LFEf--HSAT-DYQKLACALAARSRFAVITGGPGTGKTTTVV 236 
WP_013627490  561 ------dpP------RKgWdwkslLQQefge---ggtdLPAev-eeRAqAEKALALATLYERRFSILTGRAGTGKTSVLK 624 
WP_013898592  564 ------daH------DSdLswetlLKEefgeg--kgskLPPev-eeRArIEKAKALSKIYESRFSVLTGRAGTGKTSVLK 628 
WP_109760403  598 nlswiagyVs----tES-TalaaeI-Dg----------FDae---gFG-IERTRMMTSAMTQRFYCVTGRPGSGKSQAIA 657 
WP_111524015  575 ------lpV------E--AdwrkmLDDkfn-----ngkLISes-eeKArQEKAAILAELAESRITVLVGDAGTGKTTVLS 634 
WP_062542953  711 vfvgldsyLa----aST-HklketIGEg----------FDer---gFL-EERTELYKQIFAKKLFVLTGNAGSGKSHEIQ 771 
WP_079285282  594 leiaqvikkqvgaladlpaegpdwralltvpeeeggfgepqtgrehaaiDEKIMALEVLYRNRLSVLTGGAGTGKTSILR 673 
WP_011157813  621 ----------------------------------------------LArREKSGALEQLACGRFSVLIGPAGSGKTTLLK 654 
WP_106788971  585 ------isV------NAdwr--siLDKflksqgfsdskL-Ted-eeRArTEKAAVLKVLAESRISVLIGDAGTGKTTVLA 648 
WP_010871043  532 ------pnId----lNP-LeirekLRIknenk--kpagVDNeeyEKAL-DMQTEAVVNLLKNRVGILTGPAGTGKTTVIK 597 
WP_094060503  237 KLLAALQALAavhrgqpY-RIRLAAPTGKAAARLNESIAaavgklplsllpgpparndiptQVTTVHRLL----Gsr-pN 310 
WP_013627490  625 VFLKGLEELHg-----kR-PLLLLAPTGKARVRLMDRTKredg---------------svrDAYTIHQFLmrhdWln-pE 682 
WP_013898592  629 VFLKGLEELEg-----kR-PILLLAPTGKARVRLMERTKrddk---------------tlrDTYTIHQFLmrnkWin-pS 686 
WP_109760403  658 ELLKRF-DAAn------E-RTIVLAPTGKAALRLNAEAPedv-----------------twEAETIDRWIwr-sGlsnyl 711 
WP_111524015  635 VLCSHPTIKDg--------GVLLLAPTGKATVRLLESMGeeg----------------kgfTALNVAQFLvrsqRfd-wN 689 
WP_062542953  772 NILTYLEEQEd------Q-EYLLLAPTGKAALRLSSDSAfp------------------niKATTIDKFI---------- 816 
WP_079285282  674 IFLRTLRALEg-----pR-STLLAAPTGKARVKLQTSTGr---------------------PAATIHQVLsdagMlg-pN 725 
WP_011157813  655 VLCDLPEISSg--------GILLLAPTGKARVRLEEATKrl-------------------gEGQTLAQFLqryeRyd-gA 706 
WP_106788971  649 SLCTEDSIRAg--------GALLLAPTGKATVRLMESMGnla----------------defDSMNVAQFLarngGfd-wS 703 
WP_010871043  598 TIMELMKEVLg------LnKIYILTPTGKSAMVVNEKLNnl-------------------aTAKTIHRYI----Aee--f 646 
WP_094060503  311 SrhfrH---H-----------SG-HpL--PLDILVVDEASMVDVDLMAALLDALPDT-----AQLILLGDKDQLASVDAG 368 
WP_013627490  683 TfslrF---Q-----------GG-NqR--GTPTVIIDEASMIPMDLFGVLFRALDLNk---vSRLILVGDPNQLPPIGPG 742 
WP_013898592  687 NfslrY---D-----------GG-EeK--GAPTVIIDEASMIPMDLLGVLFRALDLNk---vSRLVLVGDPNQLPPIGPG 746 
WP_109760403  712 Sdg-aDsmaM-----------AR-EpRfeQFDNLVIDEMSMVNLHHVALLFRAIEVHqptstLRVILVGDENQLPPIGCG 778 
WP_111524015  690 DmryvL---S-----------DA-NfAd-VPETVIIDEASMLTEEMFGALMQALKKA-----RRIIFVGDPNQLPPIGAG 748 
WP_062542953  817 Sdf-kHkkiN-----------AG-ElR--KYQNVVVDETSMVDLLKFDKLLRIFNFKes-sfKRLILLGDPNQLPAIGYG 880 
WP_079285282  726 YrileT---P-----------EK-GkL--SYNTVVIDESSMPSVELLAALFRAINTGa---iARLIFVGDPCQLPPIGPG 785 
WP_011157813  707 SgryfR---N-----------PK-ApRekGYRSVIVDECSMLTEDQLSALIDAIEGV-----DRLILVGDPRQLPPIGAG 766 
WP_106788971  704 SmryrT---C-----------KAvKtT--IPKTVIIDESSMLTEEMFGALMSALTGA-----ERIIFVGDPNQLPPIGAG 762 
WP_010871043  647 KdyfeG---DnyfilrldkitGN-DkK--EIDALIIDESSMVDIETMGRLLGTIKLDn---lKYLIFVGDINQLPPVGAG 717 
WP_094060503  369 AVLGELCARAteghythetaswlqqvcqqpvPaslrddsgraldqvVAMLRVSYRFQ-QDS-Gi---rElA---QAVNER 440 
WP_013627490  743 RPFVDIIAWLeqsed---------------------------rqqcLAKLTERARHE-DHN-Sla--lQlA---DGY-LR 787 
WP_013898592  747 RPFVDIVSWLkadadt----------ikklyPekfqlsv-etrdacLAHLTERARHE-DHN-Sla--lQlA---DGY-LS 807 
WP_109760403  779 KPFQDVISYLrgepd------------yqtvN--------------TVRLTANCR-QrHDS-Tv---iEaA---HLFVGK 824 
WP_111524015  749 RPFVDLVYMLrlklk------------dgvfPrvc---------ehYGELTVNRRQ--QTN-GirkdvRlS---KMFTNT 801 
WP_062542953  881 RILSDVLNYLgthq-------------eysgN--------------FIRLETNCRSElKEN-Qv---lQlA---DCFKQG 926 
WP_079285282  786 RPFIDMLRWLrq-----------------ahPg------------cVADLGTCMRTD-GAG-GmavglQlA---NGYRDe 831 
WP_011157813  767 RPFVDICRKLapsee------------tpqfPkva---------pgYAELTIIGRQR-GTDrGdv---llA---RQFS-G 817 
WP_106788971  763 RPFVDLVELLrmelh------------pgvfPkvc---------ncYGELTVNRR-Q-QSD-TermdvElS---RLY-TS 814 
WP_010871043  718 KPFYDIYNYLek------------------vNpq-----------sICKLEIVLRA--DSK-Ki---vElSklfLDID-K 761 
WP_094060503  441 a-L-TEplLta-cRNsd-----fAD---VCw--lHTEns------dAALQQLalhAV--------Dgsaarfanvgrgrv 493 
WP_013627490  788 edPsPD--Dda-lLSraarqdvgGD---LEv--hFWNd-------nRQMEQI---LG--------Ar------------- 828 
WP_013898592  808 edPiPG--Dda-lLSrvarkevdGD---LEv--hYWRd-------hLQLDEL---LS--------Sr------------- 848 
WP_109760403  825 srYhDE--Lya-kLRegg---rvSDyldVRyfsgAQElqs---hvaDFVTTTl-dIAvpdhrdrsQ-------------- 880 
WP_111524015  802 edV-PDdd----vIAeiig-kgdKN---IEf--vQWSt-------kEELETH---LL--------Ei------------- 839 
WP_062542953  927 adLdTS--Fia-kFKnre--qniSDgfqARywntKEDlytqideefEELTNRl-nISg------dK-------------- 980 
WP_079285282  832 -sP-PG--Ddm-vISrvarssthGD---LTl--mTWNd-------hGSLLAK---LD--------Ea------------- 870 
WP_011157813  818 epLdAG--Ade-vWEalrs-gtlSH---VRt--aHWAl-------pSDLEPR---LTd-------Ei------------- 858 
WP_106788971  815 te-nPS--Den-iISeikl-gkqQN---IAf--kKWEt-------rEELESE---IF--------Sv------------- 853 
WP_010871043  762 e---ERikIlnemFKnke---tlGDn-eIYr--iKENigg----ieKEIITIe--VVk-------Dgn------------ 807 
WP_094060503  494 lhdqplpppcgY---RHYlQQI---------Kdcsltekcaepl------wqqwaagvleafSEFQILCAVrq-gPWGVE 554 
WP_013627490  829 -----------M---KVLlGVDdtsdayaslNkslgvadt--------------nrpepthaEHWQILSPVrn-hEFGTI 879 
WP_013898592  849 -----------M---EHLlGIKegsadylqfNksigignnkk-----------nedhdprnaEHWQILSPVrn-hEFGTT 902 
WP_109760403  881 ---------------QEAfNLLl--------Klydkghvpk-------------ndaaalelDRVQLLSPYrg-gPTGAL 923 
WP_111524015  840 -----------M---AKEtGMKdiyd-qesfDlslggtkgnyg--------iffnvdaaeyvEKWQILAPVrn-mPHGVM 895 
WP_062542953  981 ---------------SERlNQIl--------Glqsdgel-----------------gqrldlENFQILTPYrs-qISGAS 1019
WP_079285282  871 -----------F----AMlNITpgda--ksfDrslgise-----------------eewkrsEAWQIISPTri-hPFGTG 915 
WP_011157813  859 -----------V----RGlALAdrsd-qrgfElsiggseweghvlfwerradqreggaaeaaHDWQILSPVra-gAPGVE 921 
WP_106788971  854 -----------L---NEVvAADgfde-qdsfDislggvvtkng--------tyfnrgiaknaEKWQMLAPVrn-dAQGAM 909 
WP_010871043  808 ----------iKkslENAiETIl--------Kenntedf----------------fdfavfnDKLQILVPTktkgEFGSY 853 
WP_094060503  555 GVNQLVAEQLR--QSnl------------iE---RSDGWYPGRPVLVTANDY---------NL--------------GLM 594 
WP_013627490  880 ELNRKVQQKFR--GGllar-------kgyaKp-fGEERIVWTDKVMQTFNRG---------MKgwphn-----tgidYVA 935 
WP_013898592  903 EVNRKIQARYR--GGminfs-----rgkgtRp-fGEQEIVWTDKVIQLYNCS---------RKawpqg-----iginYVA 960 
WP_109760403  924 GLSNFVRDTYR--AEaked------------ewkQKNGFVHSDKIVRIRNYYvyndktkqrEL--------------RLS 975 
WP_111524015  896 NINRMIHLKYR--EKflevskywgarkriaNs-lGPEGIVYGDKVINLVNTS---------AKeaypnd---egarnYLA 960 
WP_062542953 1020 RINDFIQTEFK--SNldf--------------elRKNTFKKGDKLIRTQNYYes------gKL--------------TLS 1063
WP_079285282  916 EINRVVQERYR--GReltnan---nanrwpRa-mGDQGIVFHDKVMQRVNEP---------Kwlpeg-----tegmrFVA 975 
WP_011157813  922 AINLAIQRRFR--NKvreralt--pnakypKp-aGPQGILWGDKVINLRNNG---------RRrtypr-----qekpYVA 982 
WP_106788971  910 NINHLVHMRYR--EEltalakr-drykkiaKp-fGPEGIIYGDKVINIVN-H---------RRpawpd-----ggrnYIA 970 
WP_010871043  854 MINLFIKQESKfiPDkykn-------kmleNwffGD--GKVADKVIQIRNNY---------KKwvydterrkwvkehGVF 915 
WP_094060503  595 NGDIGITLRVplgrtpdggieWVLR----VAFpaaqdrsaketaaketaaketavnedvaqrsaGq---SqrVRWVSPSR 667 
WP_013627490  936 NGEIGLVTYThq---------kyLD----VKYst----------------------------qpDv------SYRYFRSD 968 
WP_013898592  961 NGEIGLVTSTnk-------nyNSLD----VMYst----------------------------qpEv------SYRYYRNE 995 
WP_109760403  976 NGSVGVLCGGr---------kG-WK----AFFaes---------------------------kcGf--------DWGKLD 1006
WP_111524015  961 NGEIGIACGDyskar--knddNFMH----VVFss----------------------------qkGy------KYSFDRRD 1000
WP_062542953 1064 NGTLGFILGMp------------kE----NFYfea---------------------------kgGmdelA--FSDIRSAE 1098
WP_079285282  976 NGEIGIVTAAwkkkpgeekgqDKLH----VNFst---------------------------------qpKa-SYRYLKSE 1017
WP_011157813  983 NGDIGIVVGGykrgk-mkfrpRDLE----VEFas----------------------------qpGv------KFTYYAGE 1023
WP_106788971  971 NGEIGIACGAfgk------qhDFLN----VEFss----------------------------qtDy------SYSYTANE 1006
WP_010871043  916 NGMMGFAYTFkkwn----kyqKKYEnktiIRFyy-----------------------------pKi---E------AYTD 953 
WP_094060503  668 L------QQLETVFAMTVHKSQGSEFNHTCLVLPdrmsPVLTKELLYTGITRAKNWFSFLTPNEa-----LLPDI-AQQA 735 
WP_013627490  969 Vd-----ANLELAYALTVHKSQGSDFDIVFFILPat-aATLSRELLYTGLTRFRKKIVLLIERD------Tkvletlrnp 1036
WP_013898592  996 Vd-----GSLELAYALTVHKAQGSDFDYVFLILPkn-aSTLSKELLYTGLTRFRQKMVLLIEKD------TDVLErLRSP 1063
WP_109760403 1007 P------EDFELAYGLTVHKAQGSEFEEVLVVVPdr-rALLSREMIYTAMTRSKTRLTLLVEKSer--anPLAVA-RDRS 1076
WP_111524015 1001 FdeengtANLELAYALTVHKAQGSQFGTVILVLSep-cQILSREMLYTALTRQLDKIVIMYNQE------PYHLMkYSTA 1073
WP_062542953 1099 Q------EFFELAYAITVHKAQGSGFNHLFLVLPar-yGLLSKELVYTALTRTKKTITLFIQETeenrksVLEIA-SERL 1170
WP_079285282 1018 Ve-----ESLELAYALTVHKAQGSDFGGVIFVLPrk-aQTLSRELLYTALTRYRGRLIVLAEKD------TEVLErLRNP 1085
WP_011157813 1024 FsgeegtPELELAYALTIHKTQGSQFERTFVVLPrh-cRPLSRELLYTALTRHQEELNLLHEDDigalrrysdpsaseia 1102
WP_106788971 1007 Fged-sdIILELAYALTVHKSQGSQFDTVILVIAep-cRILSREMLYTALTRQKNKIYILYNKD------PIELmkysyv 1078
WP_010871043  954 e------KEMEHAYAITIHKSQGSGFENVILIIPkglnKFVSKEMLYTAITRAKKRLYVIVEEElk---nFLETN-ISDL 1023
WP_094060503  736 VT-----RVSGL 742 
WP_013627490 1037 qasdtllrntnl 1048
WP_013898592 1064 REsaallRNTNM 1075
WP_109760403 1077 VLa---qRNssv 1085
WP_111524015 1074 ANsaiatRFTDL 1085
WP_062542953 1171 FSa---sRRTSL 1179
WP_079285282 1086 ALsetarRSTym 1097
WP_011157813 1103 rrmtdlfdapgp 1114
WP_106788971 1079 shsdiakrftdl 1090
WP_010871043 1024 AR-----RKTNL 1030
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