Conserved Protein Domain Family
Phd_like_VIAF

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cd02988: Phd_like_VIAF 
Phosducin (Phd)-like family, Viral inhibitor of apoptosis (IAP)-associated factor (VIAF) subfamily; VIAF is a Phd-like protein that functions in caspase activation during apoptosis. It was identified as an IAP binding protein through a screen of a human B-cell library using a prototype IAP. VIAF lacks a consensus IAP binding motif and while it does not function as an IAP antagonist, it still plays a regulatory role in the complete activation of caspases. VIAF itself is a substrate for IAP-mediated ubiquitination, suggesting that it may be a target of IAPs in the prevention of cell death. The similarity of VIAF to Phd points to a potential role distinct from apoptosis regulation. Phd functions as a cytosolic regulator of G protein by specifically binding to G protein betagamma (Gbg)-subunits. The C-terminal domain of Phd adopts a thioredoxin fold, but it does not contain a CXXC motif. Phd interacts with G protein beta mostly through the N-terminal helical domain.
Statistics
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PSSM-Id: 239286
Aligned: 22 rows
Threshold Bit Score: 201.725
Created: 31-May-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative G
Feature 1:putative G protein beta interface [polypeptide binding site]
Evidence:
  • Comment:based on structure of phosducin and transducin complex
  • Comment:Most of the binding energy comes from the N-terminal helical domain of phosducin with a lesser contribution from the C-terminal TRX-like domain.
  • Citation:PMID 8898209

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #  ####  # ## #                                                              #  
Q9H2J4      8 TEWNDILRKKGILPPKESLKELeeeaeeeqr---------ilqqsvvkTYEDMTLEELEDHEDefne-ederAIEMYRRR 77  human
EAK80876   11 TEFHDALRAHGIIPPKPPSRSPspelasvremr-----tqalkqatvdDLDVELENELDEEEEk--------LLDKIRRQ 77  Ustilago maydis 521
AAQ11193    6 TEWEDIQIKYGNMEAPPKQLTEdelfdlikeaaemateaekneklenaSLKDLKDMEDDEDED---------VLEQLRKK 76  Dictyostelium disc...
EAK95347   17 TEWNDILRQHGIIPEKPPSPSVeletaleeai------vkqydnrlenKDLDELDELEDEEDEd--------FLNHYKQK 82  Candida albicans S...
XP_324797  20 TEWNDILRKHGVIPEKPPSPTPmiqeaieear------rlahenrlegKDLDELDELEDEEDEe--------FLEIYRQQ 85  Neurospora crassa
CAB39851    7 TEWNDILRSKGILPEKEPDVDDvlddalvdak------qlahenrlenKDLDELAELEDEEDDe--------FLQMYRNK 72  fission yeast
Q12017     17 SEWNDILRAKGVIPERAPSPTAkleealeeai------akqhenrledKDLSDLEELEDDEDEd--------FLEAYKIK 82  baker's yeast
CAG80963   12 TEWNDILRQHGVIPERPPSPTSqieaaleeai------qkqhdnrlegLELDELDALEDDEDEa--------FLEQYRLK 77  Yarrowia lipolytic...
AAW44281   24 TEFNDALRRHGILPPKPPSRSPspdiphithtdav-ravaatadadqlVTLIEGDNLDSDDER---------MFEEYKRK 93  Cryptococcus neofo...
NP_703508  11 TEWDDLQRKFGNLPPLPKEIKEeeiylenl-----------ekleeenILDKKNLNELNDIEEkciddeylkIIEKYKND 79  Plasmodium falcipa...
Feature 1      #                                                                              
Q9H2J4     78 RLAewkatklkNKFGEVLEISGKDYVQEVTKAgeg-------------------------------------------lw 114 human
EAK80876   78 RMSqlraetkkARFGRVYPISRPDYTREVTEAskqnpdadadadadpdtyqpde-----eqnrkhtqataadkqrqggtg 152 Ustilago maydis 521
AAQ11193   77 RIQqmkveaelNKFGELKEISEPSYKSEVTECkg--------------------------------------------vm 112 Dictyostelium disc...
EAK95347   83 RMAeikklsekKKFGHVLPISKNEYENEVTKAske-------------------------------------------sy 119 Candida albicans S...
XP_324797  86 RMKelsalqkkSVHGSVYPLSKPEYSREVTDAsqn-------------------------------------------gp 122 Neurospora crassa
CAB39851   73 RMQewkdqmskAKFGSVYPISKPEYTAEVTDAske-------------------------------------------vf 109 fission yeast
Q12017     83 RLNeirklqerSKFGEVFHINKPEYNKEVTLAsqgkkyegaqtn-------------------------dngeeddggvy 137 baker's yeast
CAG80963   78 RMAeirslasrEQYGSVVKISKPEYVEEITEAskrdpknphlkkatkqqpeeeaeh-adarnaivasgdprdqdesegtf 156 Yarrowia lipolytic...
AAW44281   94 RLHemkkeekkGRFGSMEPLAREDFVREVTEGskg-------------------------------------------tg 130 Cryptococcus neofo...
NP_703508  80 RINeinrmkaeDIYGEVFEISKENFLTDINEAskknplnnnnnddddnnnddnnnnynsdnynsdnynnkqskrkpkgth 159 Plasmodium falcipa...
Feature 1                                                              #  #####               
Q9H2J4    115 VILHLYKQGI--PLCALINQHLSGLARKFPDVKFIKAISttCIPNYPDRNLPTIFVYLEGDIKAQFI-GPLVFGGm---N 188 human
EAK80876  153 VVCFLYKDGI--DTCRLLAGYLDTLAAKYASTKFVSIIGdqCIPNYPDRNLPTLLIYRNGELHRQIV-GLRPEIGldgmK 229 Ustilago maydis 521
AAQ11193  113 VVVHLFKNGI--PQCQLVNQHLTILAKKFKATKFVKIRSeeAIHNYPDKNLPPILVYFNGDIVGQII-TLRATGGd---A 186 Dictyostelium disc...
EAK95347  120 VLVHLSLQSS--LQSRLLSSILIDLASKFPELKICDIPAqrCIENYPESNCPTLIIYHDTNVVKQFI-TLTQLGGn---A 193 Candida albicans S...
XP_324797 123 VFVLLTSSLGtnVESRVLSELWRQAAREYGDIKFCEMRAsqAIENYPERNCPTILVYNKGDIVKQVV-TLMTMHGv---K 198 Neurospora crassa
CAB39851  110 VVVHMFQDSL--PACKLLAAILERLAPMYPQIKFVKIPGkqAVENYPEAMMPTLLIYGHGDLQQQIL-TLATLGGm---N 183 fission yeast
Q12017    138 VFVHLSLQSK--LQSRILSHLFQSAACKFREIKFVEIPAnrAIENYPESNCPTLIVYYRGEVIKNMI-TLLELGGn---N 211 baker's yeast
CAG80963  157 VFVHISHGGV--PESRLLSGLFDRAAQKFPDVKFVDIDSkqINEKYSLASVPTILVYYKGNPVNQVV-ALEGIGGk---S 230 Yarrowia lipolytic...
AAW44281  131 VVVFLFKDSV--PLSQHLQPLLNQAAAAHPSTKFLSIPAglCIPNYPDKNVPTLLIYRNGEMVGNVV-AGMGLKGm---K 204 Cryptococcus neofo...
NP_703508 160 VLLHLYSENV--ISCKVLNNILKELAQKHKYIKFTKGIYnrIIENYPENKLPTILIYYNGTCIHQICnVLDHIKGgl-nN 236 Plasmodium falcipa...
Feature 1                ###
Q9H2J4    189 LTRDELEWKLSESG 202 human
EAK80876  230 TKCEDIELLLTAVG 243 Ustilago maydis 521
AAQ11193  187 TTVNDIEWQLKQAH 200 Dictyostelium discoideum
EAK95347  194 TTLKDVETALADLN 207 Candida albicans SC5314
XP_324797 199 TNMLDIDKLLVDVG 212 Neurospora crassa
CAB39851  184 TSVVDVAEALVRAG 197 fission yeast
Q12017    212 SKMEDFEDFMVKVG 225 baker's yeast
CAG80963  231 TNMEDIEAFLVKMG 244 Yarrowia lipolytica CLIB99
AAW44281  205 TTVRDLEGLLLYFK 218 Cryptococcus neoformans var. neoformans JEC21
NP_703508 237 LNMPTFEKFINKYH 250 Plasmodium falciparum 3D7

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