Conserved Protein Domain Family
seadorna_VP2

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TIGR04236: seadorna_VP2 
seadornavirus VP2 protein
This protein family occurs in the seadornavirus virus group, with the designation VP2 in Banna virus, Kadipiro virus, and Liao ning virus.
Statistics
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PSSM-Id: 275073
Aligned: 3 rows
Threshold Bit Score: 1502.87
Created: 9-Oct-2014
Updated: 11-Oct-2014
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAQ83563    4 RNRRSSMKKNKQNAAKKEENVVEDSGTVSHSRLMSVMGKEAFDSlmaalaiREVPRNTDPILGSiaTSSLQYKDVAGPQP 83   Liao ning virus
NP_694470   2 PNKRSNKGKASKDVKVTSSDTKTINGGSLNDEKANSILDEAFNS-------RQVNDSGDRLITS--SSKIVNNVLPGPET 72   Kadipiro virus
ACA50111    2 PRKKERTIKNDEKIQTGTVQTQDFKTAIQPDTVTAQLIKTYSNP-------KQRGDKGEIVYDGgsTSKLADVVDQTTEP 74   Banna virus
AAQ83563   84 ------ADRDNAVKEGNLPPAELKIPADTT-VVAGRLATMVTDPMTTKNQSEVVDKLRAAMSDGMAKDMPTREVQVDISR 156  Liao ning virus
NP_694470  73 faeirdSKKDGTVVRGENQAILIDVNNDVSgATAEAFSKSTTQPLAAANTRELLEQSRLAASEGLRKVIPTKELLVAAYL 152  Kadipiro virus
ACA50111   75 ------HNADGAVKDGRIAPVKLDLEKQKL-DKLKLFETSPFDPLTVKNNQDVVDKLYATQSSSIQEVVPTKTFATELQF 147  Banna virus
AAQ83563  157 GVDQASIDAQHQVLMAMTR-QTPNIVKELKKDTRKIRKLEIGQTNLEIITSSLGRE---SVILERFPFIEILNSVELTVQ 232  Liao ning virus
NP_694470 153 GPDADRYDADLDALSAALI-VGQDEVRKIRSENLEIRKIGIGSPNLEVITSNKGRTakcAIIRENVGFMKIKTGINKNIQ 231  Kadipiro virus
ACA50111  148 GVTSEDMGKIYGAVAAVSKnENSSLTYEVKRGTHELIKVPTIPHNLVLIQSDNGRH---ALIKEDLGQWPVETGVSLVNQ 224  Banna virus
AAQ83563  233 LAMLASRLIRTYQLDDPVVLDSQGNYVT-QPFEpGTKFTRDGLSYSQIVDALNAKRNYSNEARLMPAEVMAIMRSALIVD 311  Liao ning virus
NP_694470 232 CRKLAKALLDRYGLTSPFVIDISNMVET-VVYD-NSSYSTAGYDYKQIVEALNATRRFRGMPELQPRELTEIRSDLLVTD 309  Kadipiro virus
ACA50111  225 AGVFAVQLAKKLGIDKPFVLDAGSNYFTdTSFIdTRKYCTDGLSPREIQKALNRQRAYYDRPELTISDNRTLLSQSIIYS 304  Banna virus
AAQ83563  312 NRDGRSVTSCFDGRIKNSIMQMGVSVWGRNIIKLTDYMELLRAEIPANYRLKEYSGLELHRGYVYYQPRHGSLRVLIELL 391  Liao ning virus
NP_694470 310 GPDRTSISTLYDGTIKAQIIKAAAYEWEQDIISLPEYIRRIKLSIPEGYRIKEYSPKEMRYGKVYYRFRQASLRMLLDML 389  Kadipiro virus
ACA50111  305 DTDGNDVSVVFSGAMSHAIFTYAQSQWNKNIIKLDDYIREITLTLPKHYKPRRFKEIEHTHGYVCRELNQGSLLPLVDAN 384  Banna virus
AAQ83563  392 RRECSEYFLPLITRELAI-VKSEIVTTGSIQQLISSDNNVSISRSSYANQLLASLDLSSNEKVRTYIIMASMFKNFKLDV 470  Liao ning virus
NP_694470 390 GDECSDFFIKRLYLDIKHkLPATASSTTSVVAAIAPDVRVSSTTTSLANSFLSALKLTDIENVRALSILCAVFKNLQIEI 469  Kadipiro virus
ACA50111  385 LKEASSYYFKKLMSSISN-VPVDSRTLQSSTSALAADTGQAMNRAQHVSMLTNRLTTSNAASVRAITVLTCMFRQFRIGM 463  Banna virus
AAQ83563  471 EYGQ---IPNIIDCMAATFYLLFIGEDNITDSSYTSSLLTIASFIKNRPIDALPWNDPAQLRNELRMAAWPFVERNTPVQ 547  Liao ning virus
NP_694470 470 NFTKrsgNAGIMDMIAATFALLFFPDHSISDALYLSILKVIASFLGKRAIQDYRDYNSVQMRDELIGLNWPFINRCTPEQ 549  Kadipiro virus
ACA50111  464 TYAQ---DPNIMDVAAATCMLLFRPAQSISDEQYRYCLQTMAVFLTNTTYDIINGNTTDALKMMLRNHGWPFVERYNAIE 540  Banna virus
AAQ83563  548 FRVRYSPIMSDGEPGLYNGAFNCNS-DRQHTMRDLSNIISNMSNNRWRVGNSNqLGTLMSTTISSAYTLIMKSVSSYNDV 626  Liao ning virus
NP_694470 550 LELEGSPFFSNGEIGRYDIPLNINS-RGKHVLGDISRELRAMSRERWRDNNSS-VGLLVSSVLKFAISACYDLFDTHIDV 627  Kadipiro virus
ACA50111  541 IDLSVEPLRSPGLIGKYYNPFNIDPlTKRHVEDRLEDFLNQVQVGRFRNASGNaVGATLAAFLRVCRDKTSANWQGYSVL 620  Banna virus
AAQ83563  627 ISRVRGGLPNALATGLDYSRGGYKVSSIQVVSYFLSLSPLSMTPSLYDSIDTMAWENLKQYEDLANDIDRTLIMARSIMR 706  Liao ning virus
NP_694470 628 VAHIRAMVPNEVAEMLDHTRGTYQIEPSSLVSYIMHIGKWEITDTFVDEIDVMAEKRLSEYHQLALDISEAINITRTIIS 707  Kadipiro virus
ACA50111  621 VSRYRSLIPNELFESLRNISGEYNINPQDEHSFFFALARVNFDDEFIGAIDKESAEYLDEYATLARDISNSLTLVRAAFS 700  Banna virus
AAQ83563  707 VERPEEAPIMSYVNGMSRVIDECW--DDSNKYNFISRTMEALL-AAAQLSGKEGYKHLLYEMIRKQQHDVINEPLAEITD 783  Liao ning virus
NP_694470 708 ETKPTNARRLAYTNAVVRYVDHMWgkESADGKQGISSTLGLLLgAAAGADLKSGYKRFLNDLCTRNDATPADEPLYRIME 787  Kadipiro virus
ACA50111  701 PLERTSGSIVSHSNNLNKVINHVF-----ADKPLISETMLKIL-TIDGTTGKDGYSNWLNKLVGHN-YPVYVEPVVNIMN 773  Banna virus
AAQ83563  784 NVINILRNNLGAFGITYNILIYPSNAAIVRDARFDNVFRRSPFVATMPVe----TYPSITYHELMLSR--DFARQISRGV 857  Liao ning virus
NP_694470 788 SVTKIVESNLSAFGITEEILICPKRHRIETDARFNGIFRQSPFVATMPV-----EYRRVHYTDLLKMGalEAAKVISVGV 862  Kadipiro virus
ACA50111  774 FISARFIADSSYFGYTDEIMIMPNHVNVPVDDRFG--FRDSPFCMALPRtimgnDIRRISYYEFSMME--DIDEVINQGF 849  Banna virus
AAQ83563  858 IVTGVPFQYTLEFKTGNFNSYLKNEVVSVTKSGPVINKIEFVIGFNDGPQIEAEYADILDRNYGIAIPTPPNLDLIMDYN 937  Liao ning virus
NP_694470 863 IVYGVPFNYEYRIHSGDSSTVSEKQFVNLDTNGVTLGELEWDIYFDNGHNVVAECDDIFGLGYKTMIVTPPNLQPIDNYN 942  Kadipiro virus
ACA50111  850 ILYDAYFNFSYDIMTTDGVTKLREDILIVTDTGNDIKPIHFYIYFENKNDKKLRYESKMNVSYRLYVKTPASLLPLSDYM 929  Banna virus
AAQ83563  938 RSLVTYDNADRNALYIEDHTLVYTRP 963  Liao ning virus
NP_694470 943 EYKVKYTSADDEAIYINDHIYMYKRT 968  Kadipiro virus
ACA50111  930 RAQHDYVSPSSSRVYIKDPAVLYTRL 955  Banna virus
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