Conserved Protein Domain Family
TT_ORF2

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pfam02957: TT_ORF2 
TT viral ORF2
TT virus (TTV), isolated initially from a Japanese patient with hepatitis of unknown aetiology, has since been found to infect both healthy and diseased individuals, and numerous prevalence studies have raised questions about its role in unexplained hepatitis. ORF2 is a 150 residue protein. This family also includes the VP2 protein from the chicken anaemia virus which is a gyrovirus. Gyroviruses are small circular single stranded viruses. The proteins contain a set of conserved cysteine and histidine residues suggesting a zinc binding domain.
Statistics
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PSSM-Id: 251643
Aligned: 17 rows
Threshold Bit Score: 75.6204
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9IZU7  66 QRDPdwyrWNYSHSIAVWLRECSRSHAKICNCGQFRKHwfqecagLEDrstqasleeailrplrvqgkrakrkLDYHYSQ 145 Chicken anemia virus ...
Q9JG54   4 WKPTk---YGPKRLELQWLNGCITSHDYICGCDDPAKH-------FLK-------------------------VLVEKS- 47  TTV-like mini virus
Q9WT89  28 FTTPt---INAGIREQQWFESTLRSHHSFCGCGDPVLH-------FTNlatrfnylpatsspldppgpaprgrPALRRLP 97  Torque teno virus
Q9WSV8   3 WRPPv---HDAPGIERNWYEACFRAHAGSCGCGNFIAH-------INLlagrygftggp----pppggpppgtPQVRASR 68  Torque teno virus Hum...
Q9WSW8  40 WRPPv---HNVQGQERQWYESCFRSHAAMCGCGDFIRH-------LCSladnfgrpa-------tvprppappPPVRPLP 102 Torque teno virus
Q9QUF1  32 WRPPr---RNEFTIQRDWFYSCFHSHSSMCGCADFINH-------LNHiaamlgrpe--------dqnpppppgALRPLP 93  Torque teno virus
Q9QUF4  32 WTPPr---NDQQYLNWQWYSSVLSSHAAMCGCPDAAAH-------FNHlasvlrapqn------ppppgpqrnLPLRRLP 95  Torque teno virus
Q9YKL2  84 WSPPr---NDEHYLKGQWYSSILSSHSAFCGCPDAVAH-------FNHlatvlrapen------pgppgghrpSPLRVLP 147 Torque teno virus
Q9QU31   5 LTPAv---YSKNGLENQWINTIWNTHDLMCGCNNAIKH-------LFD-------------------------ILKKKGE 49  Torque teno mini viru...
Q9JG62   5 LTPTi---YSNKGLENNWVNLIWNSHDLICGCNNPWKH-------LSD-------------------------IIARQGT 49  TTV-like mini virus
Q9IZU7 146 PTPNRKKVYKTVRWQDeLADREADFtpseedggttSSD-FDEDInfdiggDSGIVDEL-LGRPFTTP 210 Chicken anemia virus Australia/CAU...
Q9JG54  48 ---------GFDQKCL-TFGDDPGTgaa-----ttTDD-I--GI------DQGDLELL-FAEEDADg 89  TTV-like mini virus
Q9WT89  98 ALPSAPATPSRELAWPt--GSEGGAggrga-ggegGAA-VEGDY------REEELDEL-FAALEEDA 153 Torque teno virus
Q9WSV8  69 NSPAAPQQP-PALPWHgDGGEGGAAgppgaggdaaADA-HLG--------DEELADLL-DAIEDDAQ 124 Torque teno virus Human/Japan/SANB...
Q9WSW8 103 ALPAPPNPSGSRAQWPtGGG-DVEDeprgggdgagGFA------------DLADEELLtAAAELAEE 156 Torque teno virus
Q9QUF1  94 ALPAAPEAPGDRAPWPmGGGASGEGarggggdgaaGDA-VG---------DPADADLV-AAIDAAEQ 149 Torque teno virus
Q9QUF4  96 ALPAAPEAPGDRAPWPmAGGAEGEDggagg-dadhGGA-AG---------GPEDADLL-DAVATAET 150 Torque teno virus
Q9YKL2 148 ALPAAPEAPGDRAPWPmGCGGDGEGggrgg-dadgGDA-AG---------GPADADLL-DAVDAAEQ 202 Torque teno virus
Q9QU31  50 QL------------CLpSTTEDAGTqt-------hGEE-KDYDL------EEGDLDAL-FANDFEED 89  Torque teno mini virus 1 (isolate ...
Q9JG62  50 QL------------CLpSTTTDAATst-------dPDViEDDGL------QPGDLDKL-FEEDFEDG 90  TTV-like mini virus
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