Conserved Protein Domain Family
TLV_coat

?
pfam00429: TLV_coat 
ENV polyprotein (coat polyprotein)
Statistics
?
PSSM-Id: 306850
Aligned: 16 rows
Threshold Bit Score: 357.568
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
P31791     8 VFLWVLTSLGAgigakIVKEGNPHQVYTLTWQIYSqsgevvwevqgnhalnTWWPALTPDFCQLAA-GLDTWDIPDRSPK 86  Feline endogenous v...
P03386    21 IVLLILGGVNP-----VTLGNSPHQVFNLTWEVTNgdretvwaitgnhplwTWWPDLTPDLCMLALhGPSYWGLEYRAPF 95  AKR (endogenous) mu...
P08360    21 GVLGILFVTGG-----LASRDNPHQVYNITWEVTNgeqdtvwavtgnhplwTWWPDLTPDLCMLALhGPTHWGLDNHPPY 95  Cas-Br-E murine leu...
P07575     8 IWSLVILSQISq---vQAGFGDPREALAEIQQKHG------------------KP------CDCAGg-YVS-SPPINSLT 58  Mason-Pfizer monkey...
P10269     8 IFLYNLVLv-------YAGFDDPRKAIELVQKRYG------------------RP------CDCSGg-QVS-EPPSDRVS 54  Baboon endogenous v...
P21412     2 LCILILLLHPRlcpvtKGGLGKPSG--DIYTALFG------------------AP------CDCKGgTQTNNYATPTYTQ 55  Squirrel monkey ret...
P03399    21 LILLVVWW----------GFGTTAEGHPL-QQLWE------------------LP------CDCSGg-YVSPDLPITPTP 64  Reticuloendothelios...
P31796    21 LILLVAWW----------GFGTTAEGYPL-QQLWE------------------LP------CDCSGg-YVS-SIPTYYTY 63  Avian spleen necros...
ABS11217  21 TLTLLALC---------------------------------------------RPI-QTWRCSLSLgNQQWMTAYNQEAK 54 
P03383     5 FFLLLFSL-------------------------------------------THFPLAQQSRCTLTIgISSYHSSPCSPTQ 41  Human T-lymphotropi...
P31791    87 NLETSMEGTSQQLTPQG----------------CSKPWKR------CALTERDFYVCPRDNRDRa-TAHRCGGYEEYFC- 142 Feline endogenous v...
P03386    96 SPPPGPPCCSGSSDSTPgcsrdceepltsytprCNTAWNRlklskvTHAHNGGFYVCPGPHRPR--WARSCGGPESFYC- 172 AKR (endogenous) mu...
P08360    96 SSPPGPPCCSGDAGAVSgcardcdepltsysprCNTAWNRlklarvTHAPKEGFYICPGSHRPR--WARSCGGLDAYYC- 172 Cas-Br-E murine leu...
P07575    59 TVS--CSTHTAYSVTNSlk------------wqCVSTP--------TTPSNTHIGSCPGECNTIsyDSVH----ASCYN- 111 Mason-Pfizer monkey...
P10269    55 QVT--CSGKTAYLMPDQrw-------------kCKSIPK-------DTSPSGPLQECPCNSYQ---SSVH----SSCYT- 104 Baboon endogenous v...
P21412    56 VTD--CGDKNAYLTYDTnwngvs-----spkwlCVRKPPS------IPVINGRPGPCPSECTNNikSQMH----SSCYS- 117 Squirrel monkey ret...
P03399    65 SIA--VASPLPDLRVWLqgswgwgg-gfrqqweCVFKPKI------IPSVQEQPGPC--ECLTIa-TQMH----STCYE- 127 Reticuloendothelios...
P31796    64 SLD--CGGSTAYLTYGSgtgswswgggfkqqweCVFKPKI------IPSVQGQPGPCPSECLQIa-TQMH----STCYE- 129 Avian spleen necros...
ABS11217  55 FSISIDQILEAHNqs----------------pfCAKSPRYtl---dSVNGYPKIYWPPPQGRRRfgARA-----MVTYD- 109
P03383    42 PVCTWNLDLNSLTTDQRlh------------ppCPNLITYs-----GFHKTYSLYLFPHWIKKP--NRQGLGYYSPSYNd 102 Human T-lymphotropi...
P31791   143 -SAWGCETTG-----DAYWQPTSTWDLITITRNYTkpdscddrvereRKTSRHWRDPLSLPLKITFTDSGKRAlgwqTGY 216 Feline endogenous v...
P03386   173 -ASWGCETTG-----RASWKPSSSWDYITVSNNLTs----------dQATPVCKGNEWCNSLTIRFTSFGKQAtswvTGH 236 AKR (endogenous) mu...
P08360   173 -ASWGCETTG-----RAAWNPTSSWDYITVSNNLTs----------sQATKACKNNGWCNPLVIRFTGPGKRAtswtTGH 236 Cas-Br-E murine leu...
P07575   112 -HYQQCNIGN-----KTYLTA-------TITGDRTpa---------iGDGNVPTVLGTSHNLITAGCPNGKKG----QVV 165 Mason-Pfizer monkey...
P10269   105 -SYQQCRSGN-----KTYYTA-------TLLKTQT------------GGTSDVQVLGSTNKLIQSPC-NGIKG----QSI 154 Baboon endogenous v...
P21412   118 -SFSQCTQGN-----NTYFTA-------ILQRTKSt-----------SETNPVTSGLQPHGVLQAGC-DGTVG----KSV 168 Squirrel monkey ret...
P03399   128 -KAQECTLLG-----KTYFTA-------ILQKTKL-----------------GSYEDGPNKLLQASC-TGIW-----ETS 171 Reticuloendothelios...
P31796   130 -KTQECTLLG-----KTYFTA-------ILQKTKL-----------------GSYEDGPNKLIQASC-TGTVG----KPV 174 Avian spleen necros...
ABS11217 110 -CEPRCPYVGadrfdCPHWDNASQADQGSFYVNHQ-------------------------ILFLHLKQCHGIF-----TL 158
P03383   103 pCSLQCPYLG-----CQAWTSAYTGPVSSPSWKFH-------------SDVNFTQEVSQVSLRLHFSKCGSSM-----TL 159 Human T-lymphotropi...
P31791   217 TWGLR--WYLP-GKDRGIILKIKLKIDTItqt--vgpNLVLADQkTPVQLAIPVQPPRAPtqtprvnpvnstlspslgyp 291 Feline endogenous v...
P03386   237 WWGLR--LYVS-GHDPGLIFGIRLKITDSgprvpigpNPVLSDR-RPPSRPRPTRSPPPSnstpt--------------- 297 AKR (endogenous) mu...
P08360   237 FWGLR--LYIS-GHDPGLTFGIRLKVTDLgprvpigpNPVLSDQ-RPPSRPVPARPPPPSasp----------------- 295 Cas-Br-E murine leu...
P07575   166 CWNSRpsVHISdGGGPQDKARDIIVNKKF--------EELHRSL-FPELSYHPLALPEARg------------------- 217 Mason-Pfizer monkey...
P10269   155 CWSTTapIHVSdGGGPLDTTRIKSVQRKL--------EEIHKAL-YPELQYHPLAIPKVRd------------------- 206 Baboon endogenous v...
P21412   169 CWNQQapIHVSdGGGPQDAVRELYVQKQI--------ELVIQSQ-FPKLSYHPLARSKPR-------------------- 219 Squirrel monkey ret...
P03399   172 MLGPRcpCVCLdGGGPTDRFG-RICAEGL--------EEIIRHS-YPSVQYHPLALPRPR-------------------- 221 Reticuloendothelios...
P31796   175 CWDPVapVYVSdGGGPTDMIREESVRERL--------EEIIRHS-YPSVQYHPLALPRSR-------------------- 225 Avian spleen necros...
ABS11217 159 TWEIW-------GYDPLITFSLH----------------------KIPDPPQPDFPQLNS-------------------- 189
P03383   160 LVDAP-------GYDPLWFIT------------------------SEPTQPPPTSPPLVH-------------------- 188 Human T-lymphotropi...
P31791   292 apapgprppyPTSPS--RPGTGDRLLNLVQGVYLTLNLTAPNQTQDCWLCLTAK--PPYYQGVAIIGNFTNHTNAPLr-- 365 Feline endogenous v...
P03386   298 -----etpltLPEPP--PAGVENRLLNLVKGAYQALNLTSPDKTQECWLCLVSG--PPYYEGVAVLGTYSNHTSAPAn-- 366 AKR (endogenous) mu...
P08360   296 --------stPTIPP--QQGTGDRLLNLVQGAYLTLNMTDPTRTQECWLCLVSE--PPYYEGVAVLREYTSHETAPAn-- 361 Cas-Br-E murine leu...
P07575   218 -----------------KEKIDAHTLDLLATVHSLLNASQPSLAEDCWLCLQSG--DPVPLALPYNDTLCSNFACLSnhs 278 Mason-Pfizer monkey...
P10269   207 -----------------NLMVDAQTLNILNATYNLLLMSNTSLVDDCWLCLKLG--PPTPLAIP-NFLLSYVTRSSDnis 266 Baboon endogenous v...
P21412   220 -----------------GPDIDAQMLDILSATHQALNISNPSLAQNCWLCLNQG--TSMPLAFPVNISSFNASQNN---- 276 Squirrel monkey ret...
P03399   222 -----------------GVDLDPQTSDILEATHQVLNATNPQLAENCWLCMTLG--TQSPQ--PSRRMAMSLSMEIA--- 277 Reticuloendothelios...
P31796   226 -----------------GVDLDPQTSDILEATHQVLNATNPKLAENCWLCMTLG--TPIPAAIPTNGNVTLDGN------ 280 Avian spleen necros...
ABS11217 190 ----------------------DWVPSVRSWA-LLLNQTARAFP-DCAICWEPS--PPW----APEILVYNKTI------ 233
P03383   189 ----------DSDLEhvLTPSTSWTTKILKFIQLTLQSTNYS----CMVCVDRSslSSWHVLYTPNISIPQQTSSR---- 250 Human T-lymphotropi...
P31791   366 CSTTPRHGLTLTEVTGYGLCIG-------KIPPSHQNLCS------------QTVpSVGQGPYYLTAPNGTYWVCNTGLT 426 Feline endogenous v...
P03386   367 CSVASQHKLTLSEVTGQGLCIG-------AVPKTHQVLCN------------TTQ-KTSDGSYYLAAPTGTTWACSTGLT 426 AKR (endogenous) mu...
P08360   362 CSSGSQHKLTLSEVTGQGRCLG-------TVPKTHQALCN------------RTE-PTVSGSNYLVAPEGTLWACSTGLT 421 Cas-Br-E murine leu...
P07575   279 CPLTPPFLVQPFNFTDSNCLYAhyqnnsfDIDVGLASFTNcs--------syYNVsTASKPSNSLCAPNSSVFVCGNNKA 350 Mason-Pfizer monkey...
P10269   267 CLIIPPLLVQPMQFSNSSCLFSpsynsteEIDLGHVAFSNct--------siTNV------TGPICAVNGSVFLCGNNMA 332 Baboon endogenous v...
P21412   277 CTPSLPFRVQPMPSQVYPCFFKgaqnnsfDIPVGVANFVNcs--------------sSSNHSEALCPGPGQAFVCGNNLA 342 Squirrel monkey ret...
P03399   278 VLASLSGATHRVNRCQLLC--Read-nrtGIPVGYVHFTNctsiqesltrrvIYEiLRDYVLHRV------MYLCVEQHA 348 Reticuloendothelios...
P31796   281 CSLSLPFGCNPPGSIDVSCYAGead-nrtGIPVGYVHFTNctsi-----qevTNEtSQMGNLTRLCPPPGHVFVCGNNMA 354 Avian spleen necros...
ABS11217 234 SSSGPGLAL----------------------PDAQIFWVN-----------------------------TSSFNTTQGWH 262
P03383   251 TILFPSLAL----------------------PAPP-SQPF-------------------------------------PWT 270 Human T-lymphotropi...
P31791   427 PCISLQILNDTADYCILIELWPKIFYHDSE---YIYGHYEPGGRFRRD-PVSLTVALLLGGLtmgSLAAGIGTGTAAL-I 501 Feline endogenous v...
P03386   427 PCISTTILDLTTDYCVLVELWPRVTYHSPS---YVYHQFERRAKYKRE-PVSLTLALLLGGLtmgGIAAGVGTGTTAL-V 501 AKR (endogenous) mu...
P08360   422 PCLSTTVLNLTTDYCVLVELWPKVTYHSPD---YVYTQFEPGARFRRE-PVSLTLALLPEGLtmgGIAAGVGTGTTAL-V 496 Cas-Br-E murine leu...
P07575   351 ---YTYLPTNWTGSCVLATLLPDIDIIPGSepvPIPAIDHFLGKAKR----AIQLIPLFVGL---GITTAVSTGAAGLgV 420 Mason-Pfizer monkey...
P10269   333 ---YTYLPTNWTGLCVLATLLPDIDIIPGDepvPIPAIDHFIYRPKR----AIQFIPLLAGL---GITAAFTTGATGLgV 402 Baboon endogenous v...
P21412   343 ---FTALPANWTGSCVLAALLPDIDIISGDdpvPIPTFDYIAGRQKR----AVTLIPLLVGL---GVSTAVATGTAGLgV 412 Squirrel monkey ret...
P03399   349 ---YTALPNKWIGLCILASIVPDMSIIPGEepiPLPSIEYTAGRHKR----AVQFIPLLVGL---GITGATLAGGTGLgV 418 Reticuloendothelios...
P31796   355 ---YTALPNKWIGLCILASIVPDISIISGEepiPLPSIEYTARRHKR----AVQFIPLLVGL---GISGATLAGGTGLgV 424 Avian spleen necros...
ABS11217 263 HPSQRLLFNVSQG---NALLLPPISLVNLS-----TASSAPPTRVRRSpVAALTLGLAL------------SVGLTGInV 322
P03383   271 HCYQPRLQAITTDNCNNSIILPPFSLAPVP---------PPATRRRRAvPIAVWLVSAL------AAGTGIAGGVTGS-L 334 Human T-lymphotropi...
P31791   502 E-----TNQFKQLQIAMHSDIQALEESISALERSLISLSEVVLQNRRGLDLLFLQEG--GLCAALKEECCFYADHTGIVR 574 Feline endogenous v...
P03386   502 A-----TQQFQQLQAAMHDDLKEVEKSITNLEKSLTSLSEVVLQNRRGLDLLFLKEG--GLCAALKEECCFYADHTGLVR 574 AKR (endogenous) mu...
P08360   497 A-----TQQFQQLQAAMHNDLKEVEKSITNLEKSLTSLSEVVLQNRRGLDLLFLKEG--GLCAALKEECCFYADHTGLVR 569 Cas-Br-E murine leu...
P07575   421 S-----ITQYTKLSHQLISDVQAISSTIQDLQDQVDSLAEVVLQNRRGLDLLTAEQG--GICLALQEKCCFYANKSGIVR 493 Mason-Pfizer monkey...
P10269   403 S-----VTQYTKLSNQLISDVQILSSTIQDLQDQVDSLAEVVLQNRRGLDLLTAEQG--GICLALQEKCCFYVNKSGIVR 475 Baboon endogenous v...
P21412   413 A-----VQSYTKLSHQLINDVQALSSTINDLQDQLDSLAEVVLQNRRGLDLLTAEQG--GICLALQERCCFYANKSGIVR 485 Squirrel monkey ret...
P03399   419 S-----VHTYHKLSNQLIEDVQALSGTINDLQDQIDSLAEVVLQNRRGLDLLTAEQG--GICLALQEKCCFYANKSGIVR 491 Reticuloendothelios...
P31796   425 S-----VHTYHKLSNQLIEDVQALSGTINDLQDQIDSLAEVVLQNRRGLDLLTAEQG--GICLALQEKCCFYANKSGIVR 497 Avian spleen necros...
ABS11217 323 AvsalsHQRLTSLIHVLEQDQQRLITAINQTHYNLLNVASVVAQNRRGLDWLYIRLGfqSLCPTINEPCCFL----RIQN 398
P03383   335 S-----LASSKSLLLEVDKDISHLTQAIVKNHQNILRVAQYAAQNRRGLDLLFWEQG--GLCKAIQEQCCFL----NISN 403 Human T-lymphotropi...
P31791   575 DSMAKLRERFKQRQKLFESQQGWFEGWYNKSPWFTTLVSSLMVPLILLLLILMFGPCILN----HLLQFIR 641 Feline endogenous virus ECE1
P03386   575 DSMAKLRERLSQRQKLFESQQGWFEGLFNKSPWFTTLISTIMGPLIILLLILLFGPCILN----RLVQFIK 641 AKR (endogenous) murine leuk...
P08360   570 DSMAKLRERLNQRQKLFESGQGWFEGLFNRSPWFTTLISTIMGPLIVLLLILLFGPCILN----RLVQFVK 636 Cas-Br-E murine leukemia virus
P07575   494 DKIKNLQDDLERRRRQLIDNPFW-TSFHGFLPYVMPLL----GPLLCLLLVLSFGPIIFN----KLMTFIK 555 Mason-Pfizer monkey virus
P10269   476 DKIKTLQEELERRRKDLASNPLW-TGLQGLLPYLLPFL----GPLLTLLLLLTIGPCIFN----RLTAFIN 537 Baboon endogenous virus stra...
P21412   486 DKIKNLQEDLEKRRKALADNLFL-TGLNGLLPYLLPFL----GPLFAIILFFSFAPWILR----RVTALIR 547 Squirrel monkey retrovirus
P03399   492 DKIRKLQEDLLARKRALYDNPLW-NGLNGFLPYLLPSL----GPLFGLILFLTLGPCIRK----TLTRIIH 553 Reticuloendotheliosis virus
P31796   498 DKIRKLQEDLIERKRALYDNPLW-SGLNGFLPYLLPLL----GPLFGLILFLTLGPCIMK----TLTRIIH 559 Avian spleen necrosis virus
ABS11217 399 DSIIRLGDLQPLSQRVSTDWQWPWNWDLGLTAWVRETIHSVLSLFLLALFLLFLAPCLIKcltsRLLKLLR 469
P03383   404 THVSVLQERPPLEKRVITGWGL--NWDLGLSQWAREALQTGITILALLLLVILFGPCILR----QIQALPQ 468 Human T-lymphotropic virus 2
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap