4DKN,6M9X,4DKM


Conserved Protein Domain Family
GFP

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pfam01353: GFP 
Click on image for an interactive view with Cn3D
Green fluorescent protein
Statistics
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PSSM-Id: 426217
Aligned: 10 rows
Threshold Bit Score: 159.272
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4DKN_B         9 ATHDIHLHGSINGHEFDMVGGGKGDPNAGSLVTTAKSTKGA-LKFSPYLMIPHLXY--YQYLPYPDG-PSPFQVSMLEGs 84  Florida lancelet
EDO42459       8 MKLHLILEGSVNGHCFEIHGEGEGKAFEGEQWSKFTVKKGGpLPFSFDLIAPCLKYgsKPFVKYPDDmTDFFKAAVENG- 86 
6M9X_A         5 KTHELHIFGSFNGVEFDMVGRGIGNPNEGSEELNAKFTKGP-LKFSPYILVPHLXY--YQYLPFPDG-MSPFQAAMHDGs 80  Florida lancelet
4DKM_D         3 TTHEVHVYGSINGVEFDLVGSGKGNPKDGSEEIQVKSTKGP-LGFSPYIVVPNIXf--HQYLPFPDG-MSPFQAAADDGs 78  Florida lancelet
EEN59117       5 TAHDLHIFGSVNGAEFDLVGGGKGNPNDGTLETSVKSTRGA-LPCSPLLIGPNLGYgfYQYLPFPGG-ASPFQTAITDG- 81 
EEN59118       5 TAHDCHMFGSINGHEFDLVGGGNGNPNDGTLETKVRSTKGA-LPFSPVILAPNLGYgyHQYLPFPAG-TSPYQQAITNG- 81 
EDO41650      64 MKLHFKMEGSVNGHCFEIQGVGEGKAFDGEHWSKLCVVKGKhLPFSFDILMPSMSYgtKQFAKYPAGmTDFFKAAVENG- 142
XP_002603213   8 TNLDLHIYGSINGMEFDMVGGGSGNPKDGSLAVNVKSTKGA-LRVSPLLVGPHLGYghYQYLPFPDG-ASPFQAAVNNG- 84 
PFX12807      42 MTMKYKMEGCVNGHPFTIRGNGNGNPYETKQPVT--------LPQNHVVEHRIVRTg----------------------- 90  Stylophora pist...
PFX14646      20 MTMKYKMEGCVNGHPFTITGVGNGNPYD---------------------------------------------------- 47  Stylophora pist...
4DKN_B        85 GYAVYRVFDFE-DGGKLSTEFKYSYEGSHIKADMKLMGSGFPDDGPVMTSQIVDQDGCVSKKTYLNNnTIVDSFDWSYNL 163 Florida lancelet
EDO42459      87 GLSWERTMSLEqDGGFCSVVNTSKLDKDGLHYHMTFQGINLDPNGPVMKKMTMGWLPSVETNIPRGN-TLVGDINMLLKV 165
6M9X_A        81 GYQVHRTIQYE-DGASVTAHYRYTYEGSHIKGEFQVIGTGFPPDGPVMTNKLTAMDWSVTKMLYPNDkTILSTADCSYTT 159 Florida lancelet
4DKM_D        79 GYVVHRTIQFE-DGASLTGNYRYSYDGGHIKGEFHVVGSGFPADGPVMTKSLTAVDWSVATMLFPNDtTVVSTIDWTCPT 157 Florida lancelet
EEN59117      82 GYQVHRVFKFE-DGGVLNCNFRYTYEGGKIKGEFQLIGSGFPAGGPVMSGGLTTLDRSVAKLQCSDDcTITGTNNWSFCT 160
EEN59118      82 VYQKHRTFKFE-DGGVMTINFRYTYSGNKIKGEFHVVGSGFPDDGPVMTNSLQQHDHNVERLMVLGDkTIGSDNMWTFTE 160
EDO41650     143 GLSWERTMTFE-DGGYCTIVNTSELKDGSLHYHTNFHGINLKPDGPVMQKRTMGWLPSVETNIPRRD-TLLGDINMLLKV 220
XP_002603213  85 GYQMHRSFNFE-DGAVLTATYNYSYSGGKIQGEFHLVGSGFPDDSPVMTNALTGLDRSVSKLMCTSDdKLVESVHWSYRT 163
PFX12807      91 ------------DGDKVNLVETAEAHVNPL----TKQPVTLPPNHVVEHR----------------------------IL 126 Stylophora pist...
PFX14646      48 ------------------------LEGKCFHHKSMFHGVNFPADGPIMKKETTGWDPSFEKMTVSEG-LLKGDVTMFLVL 102 Stylophora pist...
4DKN_B       164 QNG--KRYRARVSSHYI------FDKPFSADLMKKQPVFVYRKCHVKATKTEVTLDEREKAFYEL 220 Florida lancelet
EDO42459     166 NDG--SFLRVKFVTVYR------FMKPVPAGFKMPPHHFIAFKLTRVENDADCNVVLLHEWGKAF 222
6M9X_A       160 TAG--KRYQSKMRENNT------FAKPMAADILQKQPMFVFRKSELQHSKTELTFKEWQKAFTDV 216 Florida lancelet
4DKM_D       158 TSG--KRYHATLRTNYT------FAKPIAATILQKQPMFVFRKTEVKASDAEINLKEWQKAFHDL 214 Florida lancelet
EEN59117     161 TDG--KRHQADVQTNYI------FAKPLPAGLKEKMPIFLGHQIEVKASKTEITLCEKVKAFIDT 217
EEN59118     161 KGGkdKRYKAEVMTNAT------FAQNLQPGLKNVMPLFVFRKVDIDCSKTEVTLIEREKVFQDL 219
EDO41650     221 NDG--SFLRVQFETVYR------FMKPVPAGFKMPPHHFMAYRLTRVDNDEHCDTVIQHEWSEAF 277
XP_002603213 164 SSG--GRYRATVQTNFT------FAKPIAAGLKNNMPMFVFRQLEVTGSKTEIGLQEQQKAFSTV 220
PFX12807     127 RTG--DGDKINLVETAEahvnplTKQPV----TLPPNHVVEHRILRTGDGDKINLVETAEAHVNP 185 Stylophora pistillata
PFX14646     103 KGG--GYHKCQFHTTYK------TKQPI----TLPPNHVVEHYIVRTGDGDKVNLVEIAEAHVNP 155 Stylophora pistillata
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