Conserved Protein Domain Family
Flavi_NS1

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pfam00948: Flavi_NS1 
Flavivirus non-structural Protein NS1
The NS1 protein is well conserved amongst the flaviviruses. It contains 12 cysteines, and undergoes glycosylation in a similar manner to other NS proteins. Mutational analysis has strongly implied a role for NS1 in the early stages of RNA replication.
Statistics
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PSSM-Id: 279316
Aligned: 2 rows
Threshold Bit Score: 728.761
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P03314  780 QGCAINFGKRELKCGDGIFIFRDSDDWLNKYSYYPEDPVKLASIVKASFEEGKCGLNSVDSLEHEMWRSRADEINAIFEE 859  Yellow fever virus 17D
P17763  777 SGCVINWKGRELKCGSGIFVTNEVHTWTEQYKFQADSPKRLSAAIGKAWEEGVCGIRSATRLENIMWKQISNELNHILLE 856  Dengue virus 1 Naur...
P03314  860 NEVDISVVVQDPKNVYQRGT-----HPFSRirdglQYGWKTWGKNLVFSPGRKNGSFIIDGKSRKECPFSNRVWNSFQIE 934  Yellow fever virus 17D
P17763  857 NDMKFTVVVGDVSGILAQGKkmirpQPMEH-----KYSWKSWGKAKIIGADVQNTTFIIDGPNTPECPDNQRAWNIWEVE 931  Dengue virus 1 Naur...
P03314  935 EFGTGVFTTRVYMDAVFEYTIDCDGSILGAAVNGKKSAHGSPTFWMGShEVNGTWMIHTLEALDYKECEWPLTHTI-GTS 1013 Yellow fever virus 17D
P17763  932 DYGFGIFTTNIWLKLRDSYTQVCDHRLMSAAIKDSKAVHADMGYWIES-EKNETWKLARASFIEVKTCIWPKSHTLwSNG 1010 Dengue virus 1 Naur...
P03314 1014 VEESEMFMPRSIGGPVSSHNHIPGYKVQTNGPWMQVPLEVKREACPGTSVIIDGNCDGRGKSTRSTTDSGKVIPEWCCRS 1093 Yellow fever virus 17D
P17763 1011 VLESEMIIPKIYGGPISQHNYRPGYFTQTAGPWHLGKLELDFDLCEGTTVVVDEHCGNRGPSLRTTTVTGKTIHEWCCRS 1090 Dengue virus 1 Naur...
P03314 1094 CTMPPVSFHGSDGCWYPMEIRPRKTHESHLVRSWVTAGEI 1133 Yellow fever virus 17D
P17763 1091 CTLPPLRFKGEDGCWYGMEIRPVKEKEENLVKSMVSAGSG 1130 Dengue virus 1 Nauru/West Pac/1974
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