Conserved Protein Domain Family
Herpes_glycop

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pfam01528: Herpes_glycop 
Herpesvirus glycoprotein M
The herpesvirus glycoprotein M (gM) is an integral membrane protein predicted to contain 8 transmembrane segments. Glycoprotein M is not essential for viral replication.
Statistics
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PSSM-Id: 279822
Aligned: 7 rows
Threshold Bit Score: 385.981
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9E6Q6  15 SHIDYVHKKMWVVQAVCFGIAVLVFFGTLVAASINLTeGFPCFFAAVVDYRTVNTTlvhtglTYPRLGGVVPVLFFQTKA 94  Marek's disease herpe...
P09298  28 HQMDTLNWRIWIIQVMMFTLGAVMLLATLIAASSEYT-GIPCFYAAVVDYELFNATldggvwSGNRGGYSAPVLFLEPHS 106 Human herpesvirus 3 s...
P04288  22 ART---AWWVWCVQVATFVVSAVCVTGLLVLASVFRA-RFPCFYATASSYAGVNST------AEVRGGVAVP-LRLDTQS 90  Human alphaherpesviru...
Q6UDH4  11 SRLERISWRMWMVEAACYIVLVLLTLVSSFASLSSTT-GFPCFVGTVGESSFGGDLmghgmtPARRDG--VKIFFMSSPS 87  Psittacid herpesvirus...
Q6SW43   4 SHVDKVNTRTWSASIVFMVLTFVNVSVHLVLSNFPHL-GYPCVYYHVVDFERLNMS------AYNVMHLHTPMLFLDSVQ 76  Human herpesvirus 5 s...
O36388   4 SKKDIFILHIWLKLMGCYVFMFITSVVLPIAAMFPNL-GFPCYYNTLVDYSKLNLR------EKNQAQHLTPTLFLEAPE 76  Alcelaphine herpesvir...
P03215   4 SKNDTFVYRTWVKTLVVYFVMFVMSAVVPITAMFPNL-GYPCYFNALVDYGALNLT------NYNLAHHLTPTLYLEPPE 76  Epstein-Barr virus (s...
Q9E6Q6  95 VVFFFYATSIVFVFLVCY-ITVGAIISSKKHVGAAYMGSGafVFSLMASP-LTILLGTVSIWLLQAVVIVLAHKLIVLAA 172 Marek's disease herpe...
P09298 107 VVAFTYYTALTAMAMAVYtLITAAIIHRETKNQRVRQSSG--VAWLVVDP-TTLFWGLLSLWLLNAVVLLLAYKQIGVAA 183 Human herpesvirus 3 s...
P04288  91 LVGTYVITAVLLLAVAVY-AVVGAVTSR---YDRALDAGRrlAAARMAMPhATLIAGNVCSWLLQITVLLLAHRISQLAH 166 Human alphaherpesviru...
Q6UDH4  88 TLFVVFSAVFVWLVVAVY-LLLGGVRVKMCNFDSSYGASE--LSSAVATM-TSLVTLSITAWAWQVFVLMLSYRQLTLAA 163 Psittacid herpesvirus...
Q6SW43  77 LVCYAVFMQLVFLAVTIYyLVCWIKISMRKDKGMSLNQSTrdISY-MGDS-LTAFLFILSMDTFQLFTLTMSFRLPSMIA 154 Human herpesvirus 5 s...
O36388  77 MFFYVTYSFIVDCCSLVYyALAAVAVVKAKKHAPGLMALSqwIMA-VGSP-TLLYMAVLKLWTIQLYIHTLSYKHIYLAA 154 Alcelaphine herpesvir...
P03215  77 MFVYITLVFIADCVAFIYyACGEVALIKARKKVSGLTDLSawVSA-VGSP-TVLFLAILKLWSIQVFIQVLSYKHVFLSA 154 Epstein-Barr virus (s...
Q9E6Q6 173 AVYLVHFSTITFFYGYFCGRGVDSKVYAEDISSAKDIDGSLHKLIGNV--RAMMVNLLSIVYSIILIMSSLMFGMLLANS 250 Marek's disease herpe...
P09298 184 TLYLGHFATSVIFTTYFCGRGKLDETNIKAVANLRQQSVFLYRLAGPT--RAVFVNLMAALMAICILFVSLMLELVVANH 261 Human herpesvirus 3 s...
P04288 167 LVYVLHFACLVYFAAHFCTRGVLSGTYLRQVHGLMELAPTHHRVVGPA--RAVLTNALLLGVFLCTADAAVSLNTIAAFN 244 Human alphaherpesviru...
Q6UDH4 164 VAFVGIFIAGLVFMLSFASGGKSPENYATFNSQLKTVCKDVHAVITAF--KAVVLNLFCVVFGVWHLMLVMLGAVIMVLN 241 Psittacid herpesvirus...
Q6SW43 155 FMAAVHFFCLTIFNVSMVTQ------YRSYKRSLFFFSRLHPKLKGTVqfRTLIVNLVEVALGFNTTVVAMALCYGFGNN 228 Human herpesvirus 5 s...
O36388 155 FVYCLHWLLSMVYTECYITNVSSQWTSSELKKTIPE-NILLYRVVHVL--KPIMMNVHLSVVALETLIFCLSFMMAIGNS 231 Alcelaphine herpesvir...
P03215 155 FVYFLHFLASVLHACACVTRFSPVWVVKAQDNSIPQ-DTFLWWVVFYL--KPVVTNLYLGCLALETLVFSLSVFLALGNS 231 Epstein-Barr virus (s...
Q9E6Q6 251 FTLKFWHVIVTVLITTSVLTLIYLLVIEFLIARYVHIILGAYIGLLIGYGMLWTTTCDYVNRFYYAMGANASNLRIACHS 330 Marek's disease herpe...
P09298 262 LHTGLWSSVSVAMSTFSTLSVVYLIVSELILAHYIHVLIGPSLGTLVACATLGTAAHSYMDRLYDPISVQSPRLIPTTRG 341 Human herpesvirus 3 s...
P04288 245 FNFSAPGMLICLTVLFAILVVSLLLVVEGVLCHYVRVLVGPHLGAVAATGIVGLACEHYYTNGYYVVETQWPGAQTGVRV 324 Human alphaherpesviru...
Q6UDH4 242 FGVSIPKATTGALVVFIVLGLVYLMMIELVVSRYVHVLLGPHLGMIIALGIAGTSALSYAETLDEIMYASWKPVAAGI-- 319 Psittacid herpesvirus...
Q6SW43 229 FFVRTGHMVLAVFVVYAIISIIYFLLIEAVFFQYVKVQFGYHLGAFFGLCGLIYPIVQYDTFL-------SNEYRTGISW 301 Human herpesvirus 5 s...
O36388 232 FYVMVSDIVFGAINLYLILPIIWYFVTEFWLSKYLPRQFGFYFGVLVASIILILPVVRYDKIFV------AAQIHRAVSI 305 Alcelaphine herpesvir...
P03215 232 FYFMVGDMVLGAVNLFLILPIFWYILTEVWLASFLRHNFGFYCGMFIASIILILPLVRYEAVFV------SAKLHTTVAI 305 Epstein-Barr virus (s...
Q9E6Q6 331 VLAVFTVLILLAMVVRLIRASLYHRRRSTRAY---AKAMKLQQNVKHRLRQLRRSYK---------------------QR 386 Marek's disease herpe...
P09298 342 TLACLAVFSVVMLLLRLMRAYVYHRQKRSRFY---GAVRRVPERVRGYIRKVKPAHR---------------------NS 397 Human herpesvirus 3 s...
P04288 325 ALALVAAFALGMAVLRCTRAYLYHRRHHTKFF---MRMRDTRHRAHSALKRVRSSMR---------------------GS 380 Human alphaherpesviru...
Q6UDH4 320 -LGAFSVIVLALAVLRAVRSYKFHKAAQSKFL---QQVASVAQTVKNRARRERNGPRvhkryydavpvdayeddpyrqSP 395 Psittacid herpesvirus...
Q6SW43 302 SFGMLFFIWAMFTTCRAVRYFRGRGSGSVKYQ---ALATASGEEVAALSHHDSLESR---------------------RL 357 Human herpesvirus 5 s...
O36388 306 NIAMIPLCALVALLVRACRVYTDRKKIAYTALpskPQTIKYTKPIEPSTKQAPDSSI---------------------FL 364 Alcelaphine herpesvir...
P03215 306 NVAIIPILCSVAMLIRICRIFKSMRQGTDYVPvseTVELELESEPRPRPSRTPSPGR---------------------NR 364 Epstein-Barr virus (s...
Q9E6Q6 387 GSQS 390 Marek's disease herpesvirus type 1 strain MD5
P09298 398 RRTN 401 Human herpesvirus 3 strain Dumas
P04288 381 RDGr 384 Human alphaherpesvirus 1 strain 17
Q6UDH4 396 RRSR 399 Psittacid herpesvirus 1 Amazon parrot/1997
Q6SW43 358 REEe 361 Human herpesvirus 5 strain Merlin
O36388 365 EEES 368 Alcelaphine herpesvirus 1 strain C500
P03215 365 RRSS 368 Epstein-Barr virus (strain B95-8)
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