1BRL,1BSL


Conserved Protein Domain Family
Alkanal_monooxygenase

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cd01096: Alkanal_monooxygenase 
Click on image for an interactive view with Cn3D
Alkanal monooxygenase are flavin monoxygenases. Molecular oxygen is activated by reaction with reduced flavin mononucleotide (FMNH2) and reacts with an aldehyde to yield the carboxylic acid, oxidized flavin (FMN) and a blue-green light. Bacterial luciferases are heterodimers made of alpha and beta subunits which are homologous. The single activer center is on the alpha subunit. The alpha subunit has a stretch of 30 amino acid residues that is not present in the beta subunit. The beta subunit does not contain the active site and is required for the formation of the fully active heterodimer. The beta subunit does not contribute anything directly to the active site. Its role is probably to stabilize the high quantum yield conformation of the alpha subunit through interactionbs across the subunit interface.
Statistics
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PSSM-Id: 238529
Aligned: 10 rows
Threshold Bit Score: 474.948
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:residues whose mutations alter kinetics. presumably part of flavin-binding pocket
  • Citation:PMID 8749369

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
1BRL_A      1 MKFGNFLLTYQPPelSQTEVMKRLVNLGKASEg--CGFDTVWLLehhfTEFGLLGNPYVAAAHLLGATETLNVGTAAIvL 78  Vibrio harveyi
1BSL_B      1 MKFGLFFLNFMNSkrSSDQVIEEMLDTAHYVDq--LKFDTLAVYenhfSNNGVVGAPLTVAGFLLGMTKNAKVASLNHvI 78  Vibrio harveyi
126511      1 MNFGLFFLNFPENt-SSETVLDNMINTVSLVDkdyKNFTTALVNhh-fSKNGIVGAPMTAASFLLGLTERLHIGSLNQ-I 77  Photobacterium pho...
126583      1 MNFGLFFLNFQLKgmTSEAVLDNMIDTIALVDkdeYHFKTAFVNehhfSKNGIVGAPMTAASFLLGLTERLHIGSLNQvI 80  Photobacterium lei...
126585      1 MNFGLFFLNFQPEgmTSEMVLDNMVDTVALVDkddYHFKRVLVSehhfSKNGIIGEPLTAISFLLGLTKRIEIGSLNQvI 80  Photobacterium lei...
126512      1 MKFGLFFLNFQKDgiTSEETLDNMVKTVTLIDstkYHFNTAFVNehhfSKNGIVGAPITAAGFLLGLTNKLHIGSLNQvI 80  Vibrio fischeri
126584      1 MKFGLFFLNFINSttVQEQSIVRMQEITEYVDk--LNFEQILVYenhfSDNGVVGAPLTVSGFLLGLTEKIKIGSLNHiI 78  Photorhabdus lumin...
126508      1 MKFGNICFSYQPPgeTHKLSNGSLCSAWYRLRr--VGFDTYWTLehhfTEFGLTGNLFVAAANLLGRTKTLNVGTMGVvI 78  Vibrio fischeri
1480401     1 MKFGNICFSYQPPgeSHKEVMDRFVRLGVASEe--LNFDTYWTLehhfTEFGLTGNLFVACANLLGRTTKLNVGTMGIvL 78  Photobacterium pho...
126581      1 MKISNICFSYQPPgeSHQEVMERFIRLGVASEe--LNFDGFYTLehhfTEFGITGNLYIACANILGRTKRIQVGTMGIvL 78  Photobacterium lei...
Feature 1                                #      #                                             
1BRL_A     79 PTAHPVRQAEDVNLLDQMSKGRFRFGICRGLYDKDFRVFGTDMDNSRALMDCWYDLMKEGFnegyIAADNEhikFPKIQL 158 Vibrio harveyi
1BSL_B     79 TTHHPVRVAEEACLLDQMSEGRFAFGFSDCEKSADMRFFNRPTDSQFQLFSECHKIINDAFttgyCHPNNDfysFPKISV 158 Vibrio harveyi
126511     78 TTHHPVRIAEEASLLDQMSDSRFILGLSDCVNFEMDFFKRQRDSQQLQFEACYDIINEAITtn-yCANNDFy-nFPRISI 155 Photobacterium pho...
126583     81 TTHHPVRIAEEASLLDQMSDGRFILGLSDCVSDFEMDFFKRQRDSQQQQFEACYEILNDGIttnyCYANNDfynFPKISI 160 Photobacterium lei...
126585     81 TTHHPVRIGEQTGLLDQMSYGRFVLGLSDCVNDFEMDFFKRKRSSQQQQFEACYEILNEALttnyCQADDDffnFPRISV 160 Photobacterium lei...
126512     81 TTHHPVRVAEEASLLDQMSEGRFILGFSDCESDFEMEFFRRHISSRQQQFEACYEIINDALttgyCHPQNDfydFPKVSI 160 Vibrio fischeri
126584     79 TTHHPVAIAEEACLLDQLSEGRFILGFSDCEKKDEMHFFNRPVEYQQQLFEECYEIINDALttgyCNPDNDfysFPKISV 158 Photorhabdus lumin...
126508     79 PTAHPVRQLEDVLLLDQMSKGRFNFGTVRGLYHKDFRVFGVDMEESRAITQNFYQMIMESLqtgtISSDSDyiqFPKVDV 158 Vibrio fischeri
1480401    79 PTAHPARQMEDLLLLDQMSKGRFNFGVVRGLYHKDFRVFGVTMEDSRAITEDFHTMIMDGTktgtLHTDGKnieFPDVNV 158 Photobacterium pho...
126581     79 PTEHPARHVESLLVLDQLSKGRFNYGTVRGLYHKDFRVFGTSQEDSRKTAENFYSMILDASktgvLHTDGEvveFPDVNV 158 Photobacterium lei...
Feature 1                                        #                                   #        
1BRL_A    159 NPSAYtqgGAPVYVVAESAsTTEWAAERGLPMILSWIINTHEKKAQLDLY-NEVATEHGy--dVTKIDHCLSYITSVDHD 235 Vibrio harveyi
1BSL_B    159 NPHAFtegGPAQFVNATSKeVVEWAAKLGLPLVFRWDDSNAQRKEYAGLY-HEVAQAHGv--dVSQVRHKLTLLVNQNVD 235 Vibrio harveyi
126511    156 NPHCLskeNMKQYILASSV-SVEWAAKKALPLTYRWSDTLEDKEILYKRY-LEVAKHNId--vSNVEHQFPLLVNLNHDR 231 Photobacterium pho...
126583    161 NPHCIskeNLKQYILATSMgVVEWAAKKGLPLTYRWSDTLAEKENYYQRY-LTVAAENNv--dITHVDHQFPLLVNINPD 237 Photobacterium lei...
126585    161 NPHCIs--EVKQYILASSMgVVEWAARKGLPLTYRWSDSLAEKEKYYQRY-LAVAKENNi--dVSNIDHQFPLLVNINEN 235 Photobacterium lei...
126512    161 NPHCYsenGPKQYVSATSKeVVMWAAKKALPLTFKWEDNLETKERYAILY-NKTAQQYGi--dISDVDHQLTVIANLNAD 237 Vibrio fischeri
126584    159 NPHAYtpgGPRKYVTATSHhIVEWAAKKGIPLIFKWDDSNDVRYEYAERY-KAVADKYDv--dLSEIDHQLMILVNYNED 235 Photorhabdus lumin...
126508    159 YPKVYs-kNVPTCMTAESAsTTEWLAIQGLPMVLSWIIGTNEKKAQMELYnEIATEYGHd---ISKIDHCMTYICSVDDD 234 Vibrio fischeri
1480401   159 YPEAYl-eKIPTCMTAESAvTTTWLAERGLPMVLSWIITTSEKKAQMELYnAVARDSGYseeyIKNVDHSMTLICSVDED 237 Photobacterium pho...
126581    159 YPEAYs-kKQPTCMTAESSeTITYLAERGLPMVLSWIIPVSEKVSQMELYnEVAAEHGHd---INNIEHILTFICSVNED 234 Photobacterium lei...
Feature 1                   #                                                                 
1BRL_A    236 SNRAKDICRNFLghWYDSYvnatkifddsdqtkgydfnkgqwrdfvlkghkdtnrriDYSYEINPVGTPEECIAiiqqdI 315 Vibrio harveyi
1BSL_B    236 GEAARAEARVYLeeFVRESysntd----------------------------feqkmGELLSENAIGTYEESTQaarvaI 287 Vibrio harveyi
126511    232 DVAHQEATAYVS--YIAEVyphln----------------------------qqqkiAELISQHAIGTDNDYYStl-naL 280 Photobacterium pho...
126583    238 RDIAKQEMRDYIrgYIAEAypntd----------------------------qeekiEELIKQHAVGTEDEYYEsskyaL 289 Photobacterium lei...
126585    236 RRIARDEVREYIqsYVSEAyptdpn---------------------------ielrvEELIEQHAVGKVDEYYDstmhaV 288 Photobacterium lei...
126512    238 RSTAQEEVREYLkdYITETypqmd----------------------------rdekiNCIIEENAVGSHDDYYEstklaV 289 Vibrio fischeri
126584    236 SNKAKQETRAFIsdYVLEMhpnen----------------------------fenklEEIIAENAVGNYTECITaaklaI 287 Photorhabdus lumin...
126508    235 AQKAQDVCREFLknWYDSYvnatnifndsnqtrgydyhkgqwrdfvlqghtntnrrvDYSNGINPVGTPEQCIEiiqrdI 314 Vibrio fischeri
1480401   238 GKKAEDVCREFLgnWYDSYvnatnifsesnqtrgydyhkgqwkdfvlqghtntkrrvDYSNDLNPVGTPEKCIEiiqrdI 317 Photobacterium pho...
126581    235 GEKADSVCRNFLenWYDSYknatnifndsnqtrgydylkaqwrewvmkgladprrrlDYSNELNPVGTPERCIEiiqsnI 314 Photobacterium lei...
Feature 1                                 
1BRL_A    316 DATGIDNICCGFEANGSEeeiIASMKLF 343 Vibrio harveyi
1BSL_B    288 ECCGAADLLMSFESMEDKaqqRAVIDVV 315 Vibrio harveyi
126511    281 ERTGSKNVLLSFESMKNHddvVKVINMN 308 Photobacterium phosphoreum
126583    290 EKTGSKNVLLSFESMKNKaavIDLINMV 317 Photobacterium leiognathi
126585    289 KVTGSKNLLLSFESMKNKddvTKLINMF 316 Photobacterium leiognathi
126512    290 EKTGSKNILLSFESMSDIkdvKDIIDML 317 Vibrio fischeri
126584    288 EKCGAKSVLLSFEPMNDLmsqKNVINIV 315 Photorhabdus luminescens
126508    315 DATGITNITCGFEANGTEdeiIASMRRF 342 Vibrio fischeri
1480401   318 DATGITNITLGFEANGSEeeiIASMKRF 345 Photobacterium phosphoreum
126581    315 DATGIKHITVGFEANGSEqeiRESMELF 342 Photobacterium leiognathi

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