3CO5


Conserved Protein Domain Family
Sigma54_activ_2

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pfam14532: Sigma54_activ_2 
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Sigma-54 interaction domain
Statistics
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PSSM-Id: 434021
Aligned: 9 rows
Threshold Bit Score: 155.193
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3CO5_B            7 LGNSAAIQEXNREVEAAA--KRTSPVFLTGEAGSPFETVARYFHKNGTPWVSPARVEYLI---D---XP--------XEL 70  Neisseria go...
jgi:M301_0217   136 LGKSPIVTALKDRLDKIAvgISPTPVLLIGPKGCGAELCARYLQDSGSPWLQLTDFNKLV---D---MP--------LDI 201
jgi:Msip34_0190 136 LGKSPVISELRQRLEQIA--GVKSPLLLIGEQGSGAELCAKFLHNPDTPWLSLTDYEQLA---T---AP--------LDI 199
Q3SMR9          137 LGRSTLIAELKKRLAQIA--GNTAPVLLLGEAGSGFEICAQFLHQPASPWIEIKDRARLV---S---DP--------LSF 200 Thiobacillus...
ACR32001        150 VGAGRAIQRFTEHLEVAV--RSHFPVYIAGEFGTDPSSVAGALHVFRCGVDAPFVEIRGA---HpegSP--------AEW 216
jgi:Plabr_3632  167 VAASLPMQRIASQIALAR--QAMLPVHITGPQGAGKLYCSQLLCHQPGRDSLPVVM-YCG---L---LPhseqrrllKDL 237
WP_014244124    322 FGSTQKSSAIRTTLKKLK--YGKTNVFIVGEKGLGKEFFAKYLSNNSEK--DIFNCKDPAhleK---IL--------SST 386 Halobacterio...
Q8FA24            9 IGNASNSIKIFNRLKSLS--QSNLPLFVTGGPGSGKTFVSNLIASLSGTNPQIFIIDSDH---H---EN--------QRS 72  Leptospira i...
Q2YC24          152 LGRGALITDLKRRLEQVA--SLTAPVLLISEPGTGVDLCARFLHEPNTPWVEPDTLATLS---N---AP--------FEL 215 Nitrosospira...
3CO5_B           71 LQK----A----EGGVLYVGDIAQYSRNIQTGITFIIGK---------AE-RCRVRVIASCSYAAGS--DGISCEEKLAG 130 Neisseria go...
jgi:M301_0217   202 LES----I----RGGILYIPEIADLKKAEQKGLLLLIAK---------SE-KYHVRVVCGTSENLPKlqAESLFDHNLFQ 263
jgi:Msip34_0190 200 LEQ----V----QEGMLFIPEVADLSKNQQKGLQLLLAR---------AD-KYGARVVCVTAKSLPQlvVAGRFDNLLLQ 261
Q3SMR9          201 VET----L----GNGTLYLPEVCELGRLEQKGLGLLLDR---------IE-GSGARLVCASSRSLDAmvAAGEFDSRLFY 262 Thiobacillus...
ACR32001        217 FAR----A----KGGTLYINGIQDMDPALLCELPGYLPSrlgqwasspAK-GESCHLVSSGLARAEQlmEAPALPRALMA 287
jgi:Plabr_3632  238 LDQdaepA----LPAGLVLKDVEKLSADLQKQLAERLAA---------GEwPSRLRLVSTSCLDVTAlaASNNFNAQLAF 304
WP_014244124    387 SNF----S----SEQTLIFKNIDSLSSSDQSRLYNWIQF---------Q----DCKFITTSCKDLIYeiKSGLFHKQLYK 445 Halobacterio...
Q8FA24           73 LES----AlsvkDNVYFLFKDFPNFPKENQAYLLKRIRE---------N--QNNSRFVFISGKEWKQklEAGQILESLYF 137 Leptospira i...
Q2YC24          216 LEQ----A----KGGLLFLKEIDELNKLAQKGLLLLLGK---------LE-RYSVRLVCVTSTPLASlaAQGVYDPKLYE 277 Nitrosospira...
3CO5_B          131 LFSESVVRIPPL 142 Neisseria gonorrhoeae FA 1090
jgi:M301_0217   264 ALSAVSLRVPAL 275
jgi:Msip34_0190 262 SISATSLRIPNL 273
Q3SMR9          263 RLSSLAIQVPPL 274 Thiobacillus denitrificans ATCC 25259
ACR32001        288 ELSLVELHVPPL 299
jgi:Plabr_3632  305 QLTPLTVHMPGL 316
WP_014244124    446 KLTQSRFHLTPL 457 Halobacteriovorax marinus
Q8FA24          138 EISNFRLDLPDL 149 Leptospira interrogans
Q2YC24          278 MLSGLCINVPAL 289 Nitrosospira multiformis ATCC 25196
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