Conserved Protein Domain Family
Adeno_L433K_22K

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pfam11081: Adeno_L433K_22K 
Adenovirus L4-33K/L4-22K
Adenoviruses express up to 20 distinct mRNAs from five major late transcription unit (MLTU) regions, L1 to L5. The L4 region expresses L4-33K and a related protein, L4-22K. L4-22K and L4-33K have complementary but not redundant functions that provide the normal pattern of mRNA production during the late phase of infection. L4-33K is an alternative RNA splicing factor that up-regulates several MLTU splice acceptor sites as the late phase progresses. L4-22K plays a role in genome packaging via its binding, in association with IVa2, to the A2 sequence within the packaging signal. Additionally, L4-22K plays an important role in the temporal switch from the early to late phase of infection by regulating both early and late gene expression.
Statistics
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PSSM-Id: 314108
Aligned: 3 rows
Threshold Bit Score: 77.7394
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P24939   1 MAPKKKLQLPPPPPTDEEEYWDSQAEEVLDEEEEMMEDWDSLD-EASEAEEVSDETPSPSVAFPSPAPQKLATVPSIATT 79  Human adenovirus 2
P0DJX1   1 MAPKKKLQLPPPPPTDEEEYWDSQAEEVLDEEEEMMEDWDSLD-EASEAEEVSDETPSPSVAFPSPAPQKLATVPSIATT 79  Human adenovirus 2
Q83891  48 TTIPKKMKF-----TKNSSVQSYQVHLPLKHE--IAEILEKIRlESKK--------------YPEKVYQ----------- 95  Ovine adenovirus 7
P24939  80 SAPQAPPALPVRRPNRRWDTTGTRAAptapaaaaaaataavtqKQRRPdsktltkpkkstaaaaagggalrlapnepvst 159 Human adenovirus 2
P0DJX1  80 SAPQAPPALPVRRPNRRWDTTGTRAG-----------------KSKQP-------------------------------- 110 Human adenovirus 2
Q83891     --------------------------------------------------------------------------------     Ovine adenovirus 7
P24939 160 relrnrifPTLYAIFQQSRGQEQELKIKNRSLRSLT----------RSCLYHKSEDQLRRTLEDAEALFSKYCALT 225 Human adenovirus 2
P0DJX1 111 --------PPLAQEQQQRQGYRSWRGHKNAIVACLQdcggnisfarRFLLYHHGVAFPRNILHYYRHLYSPYCTGG 178 Human adenovirus 2
Q83891  96 --------------------------IRNRTPASIT----------KRYLYERDLKKLFQYLEDAKKLYAKY--QS 133 Ovine adenovirus 7
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