Conserved Protein Domain Family
XtmB

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COG1783: XtmB 
Phage terminase large subunit [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 441389
Aligned: 77 rows
Threshold Bit Score: 185.528
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013381496   1 MKIKk--------------------------AAFr------------------------FKPFskkqRKIlnwwcLDSPv 30 
NP_045704      1 MKFlrsla------------------flnlqKKFknkfninildyikpkptkicfkdfeNKYLtakqKEVlfd-iesNN- 60 
NP_051203      1 MNLyqtkl------------------fttlqKEYknkygvdisqfvkltnssinfdkfeEEQLtlkqKNViks-ikkNN- 60 
WP_015777765   1 MSNI-------------------------------------------------------DKVYtkkqQEIyr-dvGSKD- 23 
WP_005577930   1 MSTTvpqgyqpyesgpiteptaerfeeeqqdKVLepl--------------------pyQQQF------------LNYG- 47 
WP_014117670   1 MI---------------------------------------------------------YQRLskrqLLAmt-wwNRPSf 22 
WP_049801406   1 MKRRg--------------------------RSVe------------------------AVRFsekqRRAlr--wwQTDg 28 
WP_054289618   1 MTs--------------------------------------------------------DGALsvkqQNSi----LDAE- 19 
WP_054289618   1 MTs--------------------------------------------------------DGALsvkqQNSi----LDAE- 19 
WP_066598449   1 MLs--------------------------------------------------------SPSLsrkqISSi----VRSKl 20 
WP_013381496  31 KDKdgIIADGAIRSGKTLAMSLSFVIWAMTs----FQG---------QNFGMCGKTIGSFRRNVLFWLKIM--LRSRG-Y 94 
NP_045704     61 YSK--VIFSGGIASGKTFLASYLLVKKLIEnksfyEQD---------TNNFIIGNSIGLLMTNTVKQIEKI--CSLLG-I 126
NP_051203     61 EKK--IILSGGIASGKTYLACYLFLKSLIEikklySSD---------TNNFIIGNSQRSVEVNVLGQFEKL--CKLLK-I 126
WP_015777765  24 WFI--LILHGAKRSGKTQLNNDLFLRELIR-----VKKianmekvdkPQYILAGFSKSTIYQNVLIELSSKy-----G-I 90 
WP_005577930  48 ETY--HGIITGIGAGKTTALIQRIGLNIQEw----NPG---------RTGVVITPTVPSLRNVLIPELRKW------GwL 106
WP_014117670  23 RDKdgIIGDGAIRSGKTVCMADGFLLWSMSn----FDG---------QNFAICGKTIESLRRNVILNLRDW--MGGI--L 85 
WP_049801406  29 ERYdaVICDGAVRSGKTFSMGLSFFLWAQTr----FDQ---------QQFGVCGKTILSLRRNVLQEIVPA--LRKLG-M 92 
WP_054289618  20 ASI--NVWEGSIRSGKTVASIVRWLMYVRT-----APA---------GPLAIIGKTRDTVARNVLDVIADL------ApG 77 
WP_054289618  20 ASI--NVWEGSIRSGKTVASIVRWLMYVRT-----APA---------GPLAIIGKTRDTVARNVLDVIADL------ApG 77 
WP_066598449  21 RKI--ALWVGAVSGGKTIAANFAFLIAVRE-----AQGt--------GLIVIVGKTLQTIERNIIDPLQQVelFGALA-G 84 
WP_013381496  95 Kv-KDHRSDNLLEVTRGDtv-nYFYIFGGKDErsqDLIQGITLAGVFFDEVALMPESFVNQATGRCSVDG--SKFWFNCN 170
NP_045704    127 DyeKKKSGQSFCKI-AGL----KLNIYGGKNRdafSKIRGGNSAIIYVNEATVIHRETLLEVIKRLRKGK--EIIIFDTN 199
NP_051203    127 PyiPRHTNNSYILI-DSL----RINLYGGDKAsdfERFRGSNSALIFVNEATTLHKQTLEEVLKRLRCGQ--ETIIFDTN 199
WP_015777765  91 Df-KFD-KLGNFTML-GV----YVVQVGHGKIdglGRIRGMTSYGAYVNEASLANELVFDEIRSRCSGKG--ARIICDTN 161
WP_005577930 107 EigEWQPSKKRWILpNGS----TVIFESADNSrkiQRLRGPNIAWFGMDEPSSIAADAWDIMVGRLRE-GdyINAFVSGT 181
WP_014117670  86 Di-TERRAENKLIVSDGHgrsnTYFLFGGRDEssyMLIQGITLAGVLLDEVALMPRSFVDQALARCSVSG--SKFWFNCN 162
WP_049801406  93 Kc-TEKRSENLLVVRSGKrr-nQFWLFGGKDEssaALIQGSTFAGVLLDEAALMPRSFVEQACARCSVAG--SKLFLDCN 168
WP_054289618  78 Ai-AFNRGAPTCRI-LGR----LVHVVGANDAkseGKIRGLTLAGAYVDEITLLPEAFWNQLLARLSVPG--AKLFGTTN 149
WP_054289618  78 Ai-AFNRGAPTCRI-LGR----LVHVVGANDAkseGKIRGLTLAGAYVDEITLLPEAFWNQLLARLSVPG--AKLFGTTN 149
WP_066598449  85 Qv-LHTRGSNTATI-LGR----EVHLVGANDArseEKIRGATIEIAYVDEATLLPVGFWEMLLTRLRVPT--ARLLATTN 156
WP_013381496 171 PDGPYHWFKLNWIDQCtgyltrkqqeelrnkniELK-D--ILYLHFTMEDNLSLSEKIKARYRAMY-TG-VFYKRYILGL 245
NP_045704    200 PESPAHYFKTDYIENT---------------------Dv-FKTYNFTTYDNPLNSADFIQTQEKLYrRFpAYRARVLYGE 257
NP_051203    200 PDHPEHYFKTDYIDNI-------------------A-T--FKTYKFTTYDNVLLSKGFVETQEKLYkDIpSYKARVLLGE 257
WP_015777765 162 PDNPEHWLKKEYIDN--------------------P-TdrILSYKFTIFDNTFLDKRYLQST-IDTtPDgMFTERNIYGN 219
WP_005577930 182 PKG-YNWVYDTFVDPDer----------------lE-Sv-NLVHDVTTQDNPHLPDVYTDQI--VEqYEgRFYEQEVKGQ 240
WP_014117670 163 PEGPEHWFYKEWVQKA-----------------KER-N--ALHLHFTMADNLALAPDIRARYERMY-SG-VFYRRYILGE 220
WP_049801406 169 PEGPQHWFYREWICKV-----------------REK-R--ALYLHFTMADNPALTKEVRRRYETCY-SG-IFYRRFVLGE 226
WP_054289618 150 PDSPAHWFKKNFLAKE-----------------HTEpDlgLKSWHFVLDDNPGIPEEKKRQYKAQY-VG-LWFKRFILGQ 210
WP_054289618 150 PDSPAHWFKKNFLAKE-----------------HTEpDlgLKSWHFVLDDNPGIPEEKKRQYKAQY-VG-LWFKRFILGQ 210
WP_066598449 157 PGSFNHWLRQQYMLNA-----------------DAK-N--MIVFEFVMDDNPSLTAQYVADMKASF-TG-AFYDRFILGK 214
WP_013381496 246 WCAADGLIYDMFDKa-kHVVSQiKE-TLLPK---HYVSCDYGTQNATVFLLWQRG--ES------GV--WYCIREYYYsg 310
NP_045704    258 WILNESTLFNEMIFnqdYEFK-----SPIMY---IDPAFSVGGDNTAi-----------------CV--LERTFEKFYay 310
NP_051203    258 WIASTDSIFTQINItddYVFT-----SPIAY---LDPAFSVGGDNTAl-----------------CV--MERVDDKYYaf 310
WP_015777765 220 WVSGEGVVYKGFDPk-rHYVKSld-gIRFSS---YIAGVDWGYGHYGSIVVFGISn--------dGK--YYMIEEHAE-- 282
WP_005577930 241 FTDFEGLVYPWFGEd--HLVD--GPpEQYDE---VVYGVDWGHNNPAVVLAIVREg---------DR--WTIADEWYE-- 300
WP_014117670 221 WCLAEGLIYE-FDRe-kHTTDQi---PKNGR---YYISVDYGTLNPFSAGLWCLS---D------GV--ATRIREYYYsg 281
WP_049801406 227 WAAAQGRVYDFFERe-tFCKA--APeGEMER---WRVSVDYGTANPTSFGLWGLR---D------GV--WYRVEEYYYns 289
WP_054289618 211 WVAAEGAIYDLLDDt-vHCRPa----PSKDRwlaVWIALDYGTSNPTHAGLIVLAt-DDa-----GTpgLYVVSEWEHdg 279
WP_054289618 211 WVAAEGAIYDLLDDt-vHCRPa----PSKDRwlaVWIALDYGTSNPTHAGLIVLAt-DDa-----GTpgLYVVSEWEHdg 279
WP_066598449 215 WSNAEGAIFDMWDPa-kHTIPw-ADlPPMRKl--IAVGIDYGTTNPTAALMLGMAtqTDlygkehSK--LYLVDEWRYes 288
WP_013381496 311 r-desKQKTDIQYVEDLKQFl----gGIKP---------T-AVVVDPSAASFIAQL--K-----QSG-F------RVKKA 361
NP_045704    311 iyqdqKPVSDSLMLASIQVLi----eNFNV---------N-TVYIEERDSTKGDGIltKtilflRNK-SshyfkvAPIKp 375
NP_051203    311 vfqdqRPANDPYIMNMVKTVi----eNFNV---------H-TLYLEDRDNTKGAGGltReyillRSN-IsqyfriVPVKp 375
WP_015777765 283 -----QYQEIDFWVAVAKDIa----nRYKGi----------VFYCDSARVEHIDRF--S-----REG-L------VAYMA 329
WP_005577930 301 -----RRCTTGDQAKAAEEFi----dKYGQ---------G-TIYCDPSEPSNIHEFe-R-----DYG-L------PAEGA 348
WP_014117670 282 r-ernSQLTDEEYYAEMGKLa----gKLPI---------E-CVVVDPSAASFVTTV--R-----RHGrF------SVRKA 333
WP_049801406 290 r-vegQQKTDAEYTEDLGRLi----aGRSV---------E-TVVADPSAASFITAL--R-----QAG-Y------PVEKA 340
WP_054289618 280 r--akGQLTDAAISKRLAEWaqqelaDVGL---------EpVVALDPSAASLRTQM--R-----ADG-Wp-----GLRSA 335
WP_054289618 280 r--akGQLTDAAISKRLAEWaqqelaDVGL---------EpVVALDPSAASLRTQM--R-----ADG-Wp-----GLRSA 335
WP_066598449 289 i-aekQKLTDVELSRRLRRWl----aDpHLpanqmqltpD-YIVLDPSAASFRVQL--Q-----QDG-L------LSTQA 348
WP_013381496 362 KNDVLDGIRFVGTQlnlgKIRFLD-SCENTIKEFSSYTWDEKAVDRGEDKPVKEYDHAMDAVR--YFCYTII-RRRSKDI 437
NP_045704    376 LSNKFKRICALIPLfesrKIEFLKiISKNVISDIYSYKGDGKT-----------KDDALDSLAnaYLLLTLNyKEKLFHF 444
NP_051203    376 KSNKFSRITTLITPftykKLYITKySSSSVFNDIYSYKGDNKT-----------HDDALDAISaaYLMLSLGyRERSVHF 444
WP_015777765 330 DKAVIPGIEAVSILyktdKLFIYEyIAKRFKEEIYSYVWATNY---RSDEVKKEFDDVMDSMR--YALYSYE-QGLGSIK 403
WP_005577930 349 ENAVSPGIRKIAEKq--dDLRVAR-HCQNVRNEFSQYQYKDDG---DSDDPLKQNDHAMDALR--YAIYSHE-RAGSDIT 419
WP_014117670 334 RNEVLDGIRLVAMLlragRIKIHE-DCKDAIREFGLYAWNDKPDKTEVDKPLKINDHAMDDIR--YFCSTVL-RRELRGI 409
WP_049801406 341 DNNVLDGIRTTADAlkngKIVICE-GCEDCLREMEAYCW-EPG---GRDAPKKENDHAMDDLR--YFAMSVM-KPRGGGF 412
WP_054289618 336 DNRVETGIRNTASLfggrRLYVDAeQCPVLWEQLCGYVWDDEALAKGEEKPKKENDHGCDMLR--YGVQAAR-GVWRAWL 412
WP_054289618 336 DNRVETGIRNTASLfggrRLYVDAeQCPVLWEQLCGYVWDDEALAKGEEKPKKENDHGCDMLR--YGVQAAR-GVWRAWL 412
WP_066598449 349 DNDVLNGIRTVASVlsagKLLVTE-RCPGWQKEVTEYVWDAKSSEKGEDKPVKANDHSQDAAR--YALQTTE-SIWRQHV 424
WP_013381496 438 MQS 440
NP_045704    445 GRF 447
NP_051203    445 GNQ 447
WP_015777765 404 TMD 406
WP_005577930 420 DLG 422
WP_014117670 410 PEL 412
WP_049801406 413 AAT 415
WP_054289618 413 PEL 415
WP_054289618 413 PEL 415
WP_066598449 425 KLA 427
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