1RBR


Conserved Protein Domain Family
RnhA

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COG0328: RnhA 
Ribonuclease HI [Replication, recombination and repair]
Statistics
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PSSM-Id: 440097
Aligned: 948 rows
Threshold Bit Score: 50.9981
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1RBR_A         3 KQVEIFTDGSCLGN--PG--PGGYGAILRYR-GR--EKTFSAGYTRTTNNRMELMAAIVALEALKE----------PCEV 65 
NP_926558      1 -MFRIATDGACSGN--PG--PGGWAALVVGE-GT--YEEVFGFEPHTTNNRMEMRAVIEGLTRVPA----------DAKV 62 
AEJ41000       1 mTYHVYTDGACRNNqaPGgqPGGWACVFVDG-P-----EYSGFDPRTTNNRMELTAVIEALKHTEK----------GAEV 64 
WP_011955776   1 -MIEIFTDGACRGN--PG--PGGWAAVIVQN-GE--VIEIGGAEERTTNNRMELRAAVEALRRVPP----------NAPV 62 
WP_102245485   6 SAYGIFADGACRGN--PG--PGAWGVLIQDAqGEi-ILKSSGVDVPTTNNKMELEGVIRGLKGLIEkwieegvsdrLSPV 80 
WP_041606390   5 EPIKVYTDGACSGN--PG--PGGYAAVILNQ-GQ--ERVVAGYEDETTNNRMELRAVIEALKEIKE----------GREV 67 
WP_125989956 163 kKIELYTDGACSGN--PG--PGGYAALIIKD-NE--EIIIKGYQPETTNNRMELMAVIEGLKEIDK----------NTSV 225
WP_052590755   1 ----MFSDGACRGN--PG--PGAWGMVGQDSsGAv-LFKGSGVETNTTNNRMEMIGALEAMKSLKHhgi----nlsESKV 67 
WP_099510177   7 NQAIIFTDGACLGN--PG--PGGYAAVVTIA-GQ--EQVIVGRDPTTTNNKMEMTAAIKALEAVPQ----------GTPI 69 
WP_013406120 131 KKYQLYTDGACSGN--PG--PGGYAALILEN-DNqeLEEISGSEEDTTNNRMELKAVIEGLKRVPK----------GSSV 195
1RBR_A        66 ILSTDSQYVRQG-ITQWIHNWKKRGWktadkK-----PVKNVDLWQRLDAALGQ-HQIKWEWVKGHAGHPENERCDELAR 138
NP_926558     63 KVLTDSQYVIKG-MSEWLPGWKRRGW-----ItstgkPVENRDLWEALERAVGG--RVLWEHVRGHTGHPENERANTLAQ 134
AEJ41000      65 VVHSDSAYVINAfLQNWFQGWERRGW-----KnakgdPVENQDLWKTLRQLVEE-RRVTWIKVKGHAGDRFNERADQLAV 138
WP_011955776  63 RLTTDSEYLLHG-ATHWLLLWKKRNW-----LtteqtPVEHRDLWEELDALADQ--RVTWQYVRGHSGDPWNERANTLAQ 134
WP_102245485  81 FVYSDSKYVTEG-ITSWVTGWKNRGW-----KkadgkEPENLELWRELDQLKSRfDTITFHWVKGHAGHPQNEMCDQMCN 154
WP_041606390  68 HVYSDSSYIING-MKSWIDDWKKRGW-----KtssnkPVSNKDLWLKLDNLSSK-FNIKFKKVKGHSGDEYNEKADSLAR 140
WP_125989956 226 RLLSDSNYVLQG-LEEWLEGWKKRGW-----KtasnrPVKNKDLWMELDNLSKY-HELEFVKVKGHSGNEYNERVDSLAK 298
WP_052590755  68 FLYSDSKYVVDG-MKSWVSGWKSRGW-----KkadkkTPENVDLWKELDTIASCfENIQYLWVKGHAGHPQNELCDQLAN 141
WP_099510177  70 VIHSDSQYVIRG-ATEWLRGWKAKGW-----RkadgkPVMNQDLWLEIDRLIQG-RKITWQWVKGHAGHEQNERVDGLAN 142
WP_013406120 196 ELFSDSTYVLKG-LSKWIKTWKSNGW-----KtaskkNVANKDLWQHLDKLISD-YKLEFQKVKGHSGDEYNEKVDSLAK 268
1RBR_A       139 AAA 141
NP_926558    135 TAA 137
AEJ41000     139 EAI 141
WP_011955776 135 AYA 137
WP_102245485 155 HAL 157
WP_041606390 141 KQI 143
WP_125989956 299 EQI 301
WP_052590755 142 EAL 144
WP_099510177 143 TEA 145
WP_013406120 269 KEI 271
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