Conserved Protein Domain Family
Arena_glycoprot

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pfam00798: Arena_glycoprot 
Arenavirus glycoprotein
Statistics
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PSSM-Id: 279177
Aligned: 3 rows
Threshold Bit Score: 812.607
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P08669   1 MGQIVTFFQEVPHVIEEVMNIVLIALSVLAVLKGLYNFATCGLVGLVTFLLLCGRSCTT------SLYK-GVY-ELQTLE 72  Lassa virus Josiah
P18141   1 MGQFISFMQEIPIFLQEALNIALVAVSLICIVKGLVNLYRCGLFQLMVFLVLAGRSCSE------ETFKiGMHtKFQEVS 74  Tacaribe virus strain...
P09991   1 MGQIVTMFEALPHIIDEVINIVIIVLIVITGIKAVYNFATCGIFALISFLLLAGRSCGMyglkgpDIYK-GVY-QFKSVE 78  Lymphocytic choriomen...
P08669  73 LNMETL----NMTMPLSCTKNNSHHYIMVGNeTGLELTLTNTSIINHKFCNLSDAHKKNLYDhalmSIISTFHLSipnfn 148 Lassa virus Josiah
P18141  75 LSLSALltnqSHELPMLCLANKTHLYLKSGR-SSFKINIDSVTVLTRSEVNLTSINLTRSID----VFVHSPKLG----- 144 Tacaribe virus strain...
P09991  79 FDMSHL----NLTMPNACSANNSHHYISMGT-SGLELTFTNDSIISHNFCNLTSAFNKKTFDhtlmSIVSSLHLSirgns 153 Lymphocytic choriomen...
P08669 149 qyeamSCDFNGGKISVQY---NLSHSYAGDAANHCGT---VANGVLQTFMRMAWGGSYI------ALDSG-----RGNWD 211 Lassa virus Josiah
P18141 145 -----SCFESDEEWVVAWwieAIGHRWDQDPGLLCRNktkTEGKLIQINISRADGNVHYg----wRLKNGldhiyRGREE 215 Tacaribe virus strain...
P09991 154 nykavSCDFNNG-ITIQY---NLTFSDAQSAQSQCRT---FRGRVLDMF-RTAFGGKYMrsgwgwTGSDG-----KTTW- 219 Lymphocytic choriomen...
P08669 212 CIMTSYQYLI-IQNTTWEDHCQFSRpspIGYLGLLSQRTRDIYISRRLLGTFTWTLSDSEGKDTPGGYCLTRWMLIEAEL 290 Lassa virus Josiah
P18141 216 PCFEGEQCLIkIQPEDWPTDCKADH---TNTFRFLSRSQKSIAVGRTLKAFFSWSLTDPLGNEAPGGYCLEKWMLVASEL 292 Tacaribe virus strain...
P09991 220 CSQTSYQYLI-IQNRTWENHCTYAGp--FGMSRILLSQEKTKFFTRRLAGTFTWTLSDSSGVENPGGYCLTKWMILAAEL 296 Lymphocytic choriomen...
P08669 291 KCFGNTAVAKCNEKHDEEFCDMLRLFDFNKQAIQRLKAEAQMSIQLINKAVNALINDQLIMKNHLRDIMGIPYCNYSKYW 370 Lassa virus Josiah
P18141 293 KCFGNTAIAKCNQNHDSEFCDMLRLFDYNKNAIKTLNEETKTRVNVLSHTINALISDNLLMKNKIRELMSVPYCNYTRFW 372 Tacaribe virus strain...
P09991 297 KCFGNTAVAKCNVNHDAEFCDMLRLIDYNKAALSKFKEDVESALHLFKTTVNSLISDQLLMRNHLRDLMGVPYCNYSKFW 376 Lymphocytic choriomen...
P08669 371 YLNHTTTGRTSLPKCWLVSNGSYLNETHFSDDIEQQADNMITEMLQKEYMERQGKTPLGLVDLFVFSTSFYLISIFLHLV 450 Lassa virus Josiah
P18141 373 YVNHTLSGQHSLPRCWMIRNNSYLNSSEFRNEWILESDFLISEMLGKEYSERQGRTPITLVDICFWSTVFFTSTLFLHLI 452 Tacaribe virus strain...
P09991 377 YLEHAKTGETSVPKCWLVTNGSYLNETHFSDQIEQEADNMITEMLRKDYIKRQGSTPLALMDLLMFSTSAYLVSIFLHLV 456 Lymphocytic choriomen...
P08669 451 KIPTHRHIVGKSCPKPHRLNHMGICSCGLYKQPG 484 Lassa virus Josiah
P18141 453 GFPTHEHIRGEGCPLPHRLNSMGGCRCGKYLPLK 486 Tacaribe virus strain Franze-Fernandez
P09991 457 KIPTHRHIKGGSCPKPHRLTNKGICSCGAFKVPG 490 Lymphocytic choriomeningitis virus (strain Armstrong)
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