1G5C,1YLK


Conserved Protein Domain Family
beta_CA_cladeD

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cd03379: beta_CA_cladeD 
Click on image for an interactive view with Cn3D
Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Statistics
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PSSM-Id: 239474
Aligned: 31 rows
Threshold Bit Score: 115.041
Created: 6-Mar-2002
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:zinc binding site [ion binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                # #                                                       #  #         
1G5C_A       23 HSPKLCIITCMDSRLidllerALGIGRGDAKVIKNAGNIVdd---gVIRSAAVAIYALGDNEIIIVGHTDCGMARLdedl 99  Methanothermobac...
AAK41461     26 NDRRLWILTCMDERVhv--eeALGIRPEDAHIYRNAGGIVtd---dAIRSASLTTNFFGTKEIIVITHTDCGMIRFtgde 100 Sulfolobus solfa...
NP_275017    29 PERGLAVLSCMDARIigllpdALGLKNGDAKLIKNAGALVthpwgsVMRSLLVAVFELKVREIMVIAHHDCGMQGLnaee 108 Neisseria mening...
NP_810594    27 PDKKIAILSCMDTRLtallpaALGIKNGDVKMIKNAGGVIshpfgsVIRSLLVAIFELGVEEIMVIAHSDCGACHMhsee 106 Bacteroides thet...
AAV45929     46 TDKQLLVVACMDERIpv--edALGLSLGDAQIYRNAGGKVtd---dVIRSAALTTQYFDTTEIIVVNHTDCGMMSAsded 120 Haloarcula maris...
ZP_00401431  26 AHRHLCIVTCVDPRLthffgsALGVERGHAVALRVPGARIapg-seLMRALAASVYVNDCQEILVIPHTDCGVASVgaae 104 Anaeromyxobacter...
EAM76057     30 AGSGLAVLTCMDSRIsp--leVLGLEKGDAKILRNAGARVtd---dVLRTLVLAHHLLGVQRVLVLAHTDCGMTKNtdad 104 Kineococcus radi...
ZP_00740127  28 PKKRMVVVSCMDARLiellpkALDIHDGDAKVIRNAGGKIasafdsVMQSVVASVYDLNADEIFLIGHHRCGASQTnpkg 107 Bacillus thuring...
ZP_00993842  34 AHRGVAVVTCMDSRIdp--lgMLGLSPGDAKIFRNPGGRVta---aALEALVLGVHLLNVQRILVVPHTSCAMTKYtete 108 Janibacter sp. H...
AAZ56165     28 AARGLALVTCMDSRIep--leMLGLKPGDAKILRNAGARVtd---dTLRTLVLAVYLLGVNRVIVLPHTGCKMASVsgde 102 Thermobifida fus...
Feature 1                                                                                       
1G5C_A      100 ivsrmrelgvee------------------evienfsidvlnpvgDEEENVIEGVKRLKSSPLIPesIGVHGLIIDINTG 161 Methanothermobac...
AAK41461    101 vakyfldkgvkvnelqidpllpslrlqstedftkwfkffrdlganSPDDIALKNAEILKNHPLIPknVTISAYVYEVETH 180 Sulfolobus solfa...
NP_275017   109 flgrvresripedri------------etlryagidldgwltgfdNVEDSVRHTVDLIRNHPLMPrhIAVHGLVIHPVTG 176 Neisseria mening...
NP_810594   107 mlekmkarginadyi------------hmmsfcgvdfhswldgfeDTEKSVRGTVDFIVHHPLIPsdVKVHGFIIDSTTG 174 Bacteroides thet...
AAV45929    121 vvagfeaavdgdlddidl-----dpalpeldigdasiaewvrmtdDIDAACAAQVEYLENHELIPddVTVTGYVYEVESG 195 Haloarcula maris...
ZP_00401431 105 lrrvmrargvad------------------adipqdpgaffglvpDVREGARETVRAIRASPFLPrhIPVHAALMDIRTG 166 Anaeromyxobacter...
EAM76057    105 vhakvlaqg------------------------vdsrsiefrtiaDQRATLVHDVQRIRSWPFLPptMPVAGGVYDVRTG 160 Kineococcus radi...
ZP_00740127 108 tlqkildrgvassei-----------lsaieyagidlekwlfgfdDVCDSTQANVDLVRNHPLIPkdVPVHGLVIDPHTG 176 Bacillus thuring...
ZP_00993842 109 lreiigeka-----------------------gsdaswqgfhvinDQEAALKADVAAVRSHPLIPdtVAVGGFIYDVDSG 165 Janibacter sp. H...
AAZ56165    103 evhdtiaary----------------------gvdtrslefhtdsDQIGALHRDVERIRHHPLLPpdLPVMGAIYDVDTG 160 Thermobifida fus...
Feature 1            
1G5C_A      162 RLKPL 166 Methanothermobacter thermautotrophicus
AAK41461    181 KLRKP 185 Sulfolobus solfataricus
NP_275017   177 KLTLV 181 Neisseria meningitidis MC58
NP_810594   175 ELTRI 179 Bacteroides thetaiotaomicron VPI-5482
AAV45929    196 HLRRP 200 Haloarcula marismortui ATCC 43049
ZP_00401431 167 ALEVI 171 Anaeromyxobacter dehalogenans 2CP-C
EAM76057    161 AIEMV 165 Kineococcus radiotolerans SRS30216
ZP_00740127 177 KLDVV 181 Bacillus thuringiensis serovar israelensis ATCC 35646
ZP_00993842 166 KLDRR 170 Janibacter sp. HTCC2649
AAZ56165    161 RVTPV 165 Thermobifida fusca YX

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