Conserved Protein Domain Family
7tmA_CysLTR1

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cd15158: 7tmA_CysLTR1 
cysteinyl leukotriene receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors
Cysteinyl leukotrienes (LTC4, LTD4, and LTE4) are the most potent inflammatory lipid mediators that play an important role in human asthma. They are synthesized in the leucocytes (cells of immune system) from arachidonic acid by the actions of 5-lipoxygenase and induce bronchial constriction through G protein-coupled receptors, CysLTR1 and CysLTR2. Activation of CysLTR1 by LTD4 induces airway smooth muscle contraction and proliferation, eosinophil migration, and damage to the lung tissue. They belong to the class A GPCR superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320286
Aligned: 10 rows
Threshold Bit Score: 480.012
Created: 18-Nov-2008
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #  ##            ###### #
Q99JA4        39 QVYSTMYSVISVVGFFGNSFVLYVLIKTYHeksaFQVYMINLAIADLLCVCTLPLRVVYYVhkgkWLFGDflCRLTTYAL 118 house mouse
NP_001018484  16 QVYSTVYSIITVFGLMGNGFALYVLLRTYRqtsaFHIYMLNLGVSDLLCVSTLPLRVLYYInkgqWNLGDflCRLSSYAL 95  zebrafish
Q9Y271        24 QVYSTLYSMISVVGFFGNGFVLYVLIKTYHkksaFQVYMINLAVADLLCVCTLPLRVVYYVhkgiWLFGDflCRLSTYAL 103 human
EMP40036      27 KVYSTLYSMIAILGFVGNGFVLCVLIKTYQqktaFQIYMLNLAVSDLLCVCTLPLRVVYYVhrgnWFFGDflCRVSSYAF 106 green seaturtle
XP_004916956  45 KVYSTAYSMFTLFGLFGNSFALFVLLKTYRqrtaFHIYMINLAVSDLLFICTLPFRIVYYVskgrWYFGNflCRISSYVF 124 western clawed ...
XP_007890412  25 QIYSTIYSFIFVVGLSGNSFALYVLVKTFKqrtaFNIYMLNLAISDLLCVCTLPLRVAYYSskgrWIFGSfmCRISSYAF 104 elephant shark
XP_006000796  16 KAYSTVYSLVTVFGFVGNGFALFVLIRTFRqktaFHIYMLNLAISDLLCVCTLPLRVVYYVhkgqWLFGDalCRISTYAF 95  coelacanth
XP_004073698  24 MVYSTFYSVVTVFGLVGNGLALLVLFRTQRqttpFHVYMVNLALSDLLCVMTLPLRVSYYArrgrWEEGDflCRISSYFL 103 Japanese medaka
XP_008325817  26 RVYTTTYSIITVVGLVGNGLALVVLIKTRSqnspFHIYMMNLAMSDLLFVLTLPMRVLYYVkkgqWDLGDflCRISSYTL 105 tongue sole
XP_003970191  26 QVYSTLYSVITVLGLAGNGLALAALSRPRRqsssFYIYLVNLAVSDLLCVMMLPLRVVYYVkkgqWDYGDvvCRLTSYSL 105 torafugu
Feature 1        #  #                                            # #####                         
Q99JA4       119 YVNLYCSIFFMTAMSFFRCVAIVFPvQNINLVtqKKARFVCIGIWIFVILTSSPFLMyksy-qdekNNTKCFEPPqnnq- 196 house mouse
NP_001018484  96 YVNLYCSVFFMMAMSFTRFLAIVFPvQNLRLAteKKAWIVCVCIWIFICMTSSPFLLsgqhtdpltNKTKCFEPPekpg- 174 zebrafish
Q9Y271       104 YVNLYCSIFFMTAMSFFRCIAIVFPvQNINLVtqKKARFVCVGIWIFVILTSSPFLMakpq-kdekNNTKCFEPPqdnq- 181 human
EMP40036     107 YVNLYCSILFMTAMSFSRCIAIVFPvQNLNLVteKKSRLACMSIWIFVTLTSSPFLLsgsy--qegNKTKCFEPPkssq- 183 green seaturtle
XP_004916956 125 YVNLYCSIFILTAMSITRFLAIVFPvRNLKLVsiKRAKWACAGIWIFVTVTSSPFLMtgsy--tvdNMTKCFEPPpsne- 201 western clawed ...
XP_007890412 105 YVNLYCSIYFMTAMSFTRFIAIVFPvQNLKIVniKKAKIVCSVIWIFVMLTSTPFLMkgsh--idgNKTKCFEPPshssk 182 elephant shark
XP_006000796  96 YVNLYCSILFMTAMSLSRFIAIVFPvKNLNLVnvKKAKIVCLGIWIFVTLTTSPFLMtgts--vknNKTKCFEPPdti-- 171 coelacanth
XP_004073698 104 YVNLYCSIYFMTAMSVTRFLAIVYPvQNLQLVtvNKSRIVCVCIWIFCSLSMSSFLMsgqhvdnstNIIKCFEPPgqdsk 183 Japanese medaka
XP_008325817 106 YVNLYCSIYIMAAMSVTRFMAIVFPvQNMRLVtvKRARLVCVSIWLFISVSSTPFLMsgekfdpvtNKTKCFEPPsstq- 184 tongue sole
XP_003970191 106 YVNLYCSIYLMTAMSISRFLAIVFPmKNMQLVkvKCARRVCVCIWLFVCLSTSPFLMngqhvdtstNKTKCFEPPqgqg- 184 torafugu
Feature 1                 #  ### ### ##                                                 #  ## ## 
Q99JA4       197 -----akkyVLILHYVSLFFGFIIPFVTIIVCYTMIILTLLKntmk--knmPSRRKAIGMIIVVTAAFLVSFMPYHIQRT 269 house mouse
NP_001018484 175 -----sldkLIMLNYFSLVVGFIIPFLVILLCYAGILRTLLRntsgankqrYTRNKAIRLIIVVMLAFLISFMPYHIQRT 249 zebrafish
Q9Y271       182 -----tknhVLVLHYVSLFVGFIIPFVIIIVCYTMIILTLLKksmk--knlSSHKKAIGMIMVVTAAFLVSFMPYHIQRT 254 human
EMP40036     184 ------mtsLLVLHYIALFVGFIIPFSVITICYAMIIRTLLKnslk--knqSTRKKAIWMIIIVTAAFLVSFTPYHIQRT 255 green seaturtle
XP_004916956 202 -----akimVIVLNYISLVFGFIIPFAIILVCYTMIIKTLLKnsmk--kqqESRKKAIRMIIIVMAVFFLSFMPYHIQRT 274 western clawed ...
XP_007890412 183 kavskglktLLTLNYISLILGFIIPFLIIIICYAFIVKSLLKstaainkkkASRRKAIHLIIIVLTAFLVSFMPYHIQRT 262 elephant shark
XP_006000796 172 ------kpqLLALNYISLVVGCIIPFCVILLCYTLIIRALLNnqmk--nksSSHKKAIRLIIIVMTAFFVCFLPYHIQRT 243 coelacanth
XP_004073698 184 -----qltkLLLLNYIGLVFGFLLPFLIIGICYVGIVRTLLSrtqtarrqqASGVRAIRMIVIVLLTFLFSFTPYHIQRT 258 Japanese medaka
XP_008325817 185 -----qlqkLKKMNYFALVVGFVVPFLVILICYVGIVRVLVSrnnvarrqsETGSKAIRMIVIVLLTFLICFMPYHIQRT 259 tongue sole
XP_003970191 185 ------lhkLLVLNYLSLVLGFALPFLVILLCYAAIIWTLLSrkytvrqqqGIGTKAIRMIVVILLTFFICFMPYHVQRT 258 torafugu
Feature 1         #                ## ###  #  ##                     
Q99JA4       270 IHLHllhsetrpcdsvlrMQKSVVITLSLAASNCCFDPLLYFFSGgNFRRRL 321 house mouse
NP_001018484 250 LHLHfksrksatceevnyMQKSVVITLCLAAANSCFDPMLYFFSGeNFRHRL 301 zebrafish
Q9Y271       255 IHLHflhnetkpcdsvlrMQKSVVITLSLAASNCCFDPLLYFFSGgNFRKRL 306 human
EMP40036     256 IHLHflkrkdsscedilfMQKLVVITLSLAASNCCFDPLLYFFSGgNFRRRL 307 green seaturtle
XP_004916956 275 IHLHflkgnkn-ckeslhMQKTVVITLALAASNCCFDPLLYFFSGeNFRRRL 325 western clawed frog
XP_007890412 263 VHLHslfqagencdeiiyMQKSVVVTLCLATANTCFDPLLYFFSGeNFRRRL 314 elephant shark
XP_006000796 244 IHIHflmqkns-cedrlnMQKSVVITLCLAASNTCIDPLLYFFSGeNFRRRL 294 coelacanth
XP_004073698 259 VHLHslsrensscseqiaIQKSVVVTLCLAAANSCFDPLLYFFSGeGFRSRL 310 Japanese medaka
XP_008325817 260 VHLYlitpydt-csyqrgMQKSVVVTLSLAAANTCFDPLLYFFSGeSFRKRV 310 tongue sole
XP_003970191 259 VHLSflsrvdttcaerttMQKSVVVTLTLAAANSCLDPLLYFFSSkSFRTCS 310 torafugu

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