Conserved Protein Domain Family
gpA1

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COG5525: gpA1 
Phage terminase, large subunit GpA [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 444276
Aligned: 80 rows
Threshold Bit Score: 489.455
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012205268   3 DHYAQALSDACSGFEALRPPNRMRVSEGIADTLVIQqPGSPKTSWSPTETPYMVEPADALASRRHEAVVFVGPARTGKTA 82 
NP_310990      6 ESHSRASDIWREVASLFRPPSRLPVAEAIRRYMRVPrGANTSGPWESSLTPYMIDPINTLSAREYDAVVFVGPARTGKTE 85 
WP_015922975  19 PPFTAPEEILADALPLLDPPSRVTVTEAAERHMRVPv-QGNWVPFDRAVTPYTVEPADMTQSRRFKAVVFLGPSQSGKSQ 97 
WP_010786315   1 -mFASAREIRCDIANAIKAPRRMKVSEAVAEYMRVPvGGGNSVKWDKNTAAYMLEPMNCLNSREYDAVVFVGPARTGKTI 79 
WP_005612403  19 PPYSSAPAVLEQALPSLSPATRMGVVDAAEAHMKVNa-NGRWADFDRGVTPYMVEPADMTTSRRYREVIFAGPARAGKTV 97 
WP_048531555  19 PPFAQARDLLADAMPLLDAPSRMAPIEAAARYVRVEt-RGVWQNFDPDVTPYMIEPVNTVQSRLYKGGAFVGPSQSGKTM 97 
WP_083274623  15 ASYRSLEELIAAATEAVAPPERITVTEAAKKYVRIKe-KNYSGLWSEDKTPYLVEPQNVLTSLAYQGMVFVGPARTGKSQ 93 
WP_121815479   2 TIQATSSVTRKNTSGMMKAPRRMPVADAVAKFMRVPmGAGNSVPWDPLVAPYVIEAMNCLASREFDAVIFVGPARTGKTI 81 
WP_099554571   7 HEFATLEEIVIAASEMVRPPERITVSEAATKYRYLDnPGSYVGYWKNEKTPYLVEVMDTLTSLDFRGVVLAGAARIGKTD 86 
WP_002433779   2 AKRASARGIRRDMSGILRAPRRMLVAEAVSKYMRVPmGAGNSVPWDPNLAPYVIEPMNCLASREYDAVVFVGPARTGKTI 81 
WP_012205268  83 SLLlGWMSHTVVNDPGDMLFVQMSKDKAREFSKTDVDRAIRYSPKVQAMKSDRAVDSNTFDTMFRHGMWVRIAWPTVGNV 162
NP_310990     86 GLIdGWIVYGIICDPADMLVVQMTETKAREHSRTRLSRTFRHSPEVSKRLSPSRNDNNVHDKMFLDGSFLKIGWPSITVF 165
WP_015922975  98 MMQ-SVSAHAVTCAPGPVQVIHMTKTDADAWVEEKLDPTILNSPALRERLGTGRDDSTFSRKRF-KGMRLTIGYPVPNQL 175
WP_010786315  80 GLIdGWITYSIICDPSDFLLVQLTQEKASEHSRKRLDRTFRCSPEIAKRLSPRKNDNNVHDKYFRAGNLLKIGWPSINVL 159
WP_005612403  98 MLL-STVSHLVICDPGVCQIVHMTEATAEAWVDEELMPMIENSPELAKRQGRGRSDRNILSKKFIGGAKISIGAPTKAFL 176
WP_048531555  98 ALI-TTALHPVVCDPAPVLVIHMDRPSRDRWVEESLNSVIRNSPEVRDRLGRAREDDTFSRKRF-RGMRLNLGYPTPQWL 175
WP_083274623  94 MWL-NWMSHSAICDPADMMLVQMSQGRAREFSQSDLRKHFRNSADVRAKLVPGRVNDNVFDKTFISGMRVTIVHPSINEF 172
WP_121815479  82 GLIdGWVVYNVVCDPSDMLIIQMTEEKAREHSKKRLARTFRSSPEMVKRLSPNRNDNNVYDRTFLNGNYLKIGWPSINIM 161
WP_099554571  87 IFY-NWLTHTAICDPADMMFIGMTKEVSRDISQGDLGKVFRNTKELGSRLIPGRHSDNVFDKRFKSGMRLLLRWPSITEL 165
WP_002433779  82 GLIdGWVVYNVVCDPSDMLIIQMTEEKAREHSKKRLDRTFRCSPEVKSRLSPRRNDNNVHDRTFRAGNYLKIGWPSVNIM 161
WP_012205268 163 SGSTYRYVAITDIDRIenaeNVD-----GEGPLFDLAKKRTTTFlSRGMTLVESSPgyPLEdpswqpa---tpheappTG 234
NP_310990    166 SSSDYRRVALTDYDRFp--eNVD-----GEGDAFTLASKRTTTFmSSGMTLVESSPgrDITdtkwrcg---gaheappTT 235
WP_015922975 176 SSRSQRLVMLTDYDHMp--qKLGpk-dsPEGSPFGMALQRIRTFmSRGCVLAESSPafPVDpnadwaphaghphmlppAT 252
WP_010786315 160 SSSDYKYVALTDYDRWp--dDID-----GEGDGFSLASKRTTTFmSAGMTLVESSPgkDIVdikhvpk---ssheappTT 229
WP_005612403 177 SGKTTRTVLLTDLDRMp--lNIG-----KEGSPFAMGAKRTETLgSRGMTVAEASPghVVTdpewkpq---tpheappVA 246
WP_048531555 176 SSAKYRLVAMTDYDHFp--pELGvrkeaPEGSPFDMGMQRIKTFlSRGFVFAESTPawPVIrpdwqpdr-aaphefppVR 252
WP_083274623 173 SGKTVGRNWAMDYDRLp--lSID-----GEGDAWTLLSKRGETLgRYAMTVVESSPgfDVNdarwips---spheappCE 242
WP_121815479 162 SSSDYKCVALTDYDRFp--eNID-----GEGDGFTLASKRTTTFmSSGMTLVESSPgrDITnvkwrpt---spheappAT 231
WP_099554571 166 SGKTIPRLCLADYDRMe--dDIA-----SEGPAFDLAMKRSETFkRFGMTFAESSPgrEIRdpkwirk---tpheappVH 235
WP_002433779 162 SSSDYKCVALTDYDRFp--eDID-----GEGDAFSLASKRTTTFmSSGMTLVESSPgrDIIdtkwrrt---spheappTT 231
WP_012205268 235 -GILSLYNRSDRRRFYWRCLDCRAWFEaapglslfkrlPAIKQlLEEIRTMdiptMAKHYGQVACPHCGSEPGHQMKGAL 313
NP_310990    236 -GILSLYNRGDRRRWYWPCPHCGEYFQ-----------PVMDNmTGYRNNPdf-vAAGQAARLMCPHCRGLIAPEQKREL 302
WP_015922975 253 aGLVPIYNEGTRGRWYWDCPDCGDLFE-----------PRFDR-LHYDADLdp-gAAGEQAMMECPHCGTLIAHRHKVGL 319
WP_010786315 230 -GILSLYNRGDRRRFYWQCPECSEYFE-----------PSMANmVDFRDEPdf-vTASEKARLQCPHCLHKIPPEMKREL 296
WP_005612403 247 gGILELYNGGTRGRWYWDCPTCGEAFE-----------PRFDR-LHYDKKLsp-aEAGASAVMVCPHHGCVIEHSQKVSL 313
WP_048531555 253 fGIVPLYNRGTRGRWYWQCRDCDELFQ-----------PAFAH-LHYDETLsp-rAAGETAEMECQACGALIGPHHKTEF 319
WP_083274623 243 -GILSLYNMGDRRRRYWSCPHCGQKFE-----------PDFKL-FDYPASAdp-hDAAEQVVMVCPGNGCRLVPDLKHDL 308
WP_121815479 232 -GILSLYNRGDRRRWYWPCPHCCEYFQ-----------PCAAVvAGYQEIIdp-vMASEAAFIQCPHCAGEIKADKKREL 298
WP_099554571 236 gGILSLYNRGDRRRWNWRCPYCDNPFE-----------PHFGL-LKYPKSAdn-wEAAQMVTMQCPHCRMDIDPSFKREL 302
WP_002433779 232 -GILALYNRGDRRRWYWPCPHCGEYFQ-----------PEMHAmTGYREISdt-vKASEAAHICCPSCNGKITADMKRTL 298
WP_012205268 314 NRA-----GIWVPDgcslADEGhfvgs------prtsTIRGYWLGGVAAAYQSWESIVAQHLYGlqdyaltGSEQKLKQT 382
NP_310990    303 NNQ-----GIWLREgeraAADGsitgt------prnsRIASFWMEGPAAAFQTWEQLIFKLLAAeeeyertGSEETLKAV 371
WP_015922975 320 NRAalegrGGWLHEgrhiDANGrralvriddpdirrtPIASYSLNGAAAAFASWDELVQRYETErrrfealGDDTDFARV 399
WP_010786315 297 NIN-----GVWLKEgqkiDTSGqilge------grksRIASFWLEGPAAAYQTWAQLTYKLLTAeqeydltGSEETLKAV 365
WP_005612403 314 NRS-----GYWLHE----TADGglarids--gevlksDRVSYWLNGAAAAFASWARLVSKFETAlrafnagGDEGLLQVT 382
WP_048531555 320 NRQaqrgrGGWLHE----AEQGgalvpmg-dsairgsEIASWALDGAAATFANWSDLVSRRIEAerqleelGEDIQLSRF 394
WP_083274623 309 EHD-----GRWLREgeiwLEDGsvvgq------prrsDIASFWLKGPSAAFNTWQKLVLNYLNAksdfertGSEEKLRAV 377
WP_121815479 299 NGL-----GIWLRDgetiNKLGergge------prrsRIASFWMEGPAAAYQTLQQLVYKRLTAeqdyeatGSEETLKAV 367
WP_099554571 303 NSK-----GRWIREgmlwLPDGsivgq------pirtDIASFWLKGPAAAFQDWQSLVFAYLQAvdvyentGDENPLKKT 371
WP_002433779 299 NLK-----GVWLREgqqiDRDGtvtge------arrsRIASFWMEGPAAAYQTWAQLVYKLLTAeqdyevtGSEETLKTV 367
WP_012205268 383 TNTDQGMPYIERrlVEARGSg-TTPRDRAEvDLe----RFIAPPAARCITASVDVQGgqnARFDVQVHA--------VGP 449
NP_310990    372 VNTDIGRPYLPRsaTEQRKS--ELLEQRAE-PFp----RRSVPDGVRFIEATVDVQGgknRRFVVQITG--------YGE 436
WP_015922975 400 HYTDIGVPYRRPeaEEEGALtaAQIREHMR-EQe----RRVAPAWTRFVTVSIDVQG---NRFEALVMA--------WGA 463
WP_010786315 366 INTDWGLPYFPRsaLEQRRA--DELMERRE-ELk----EKTVPPQCRFLIAAVDVQGgrnRRFVVQIVG--------YGE 430
WP_005612403 383 INTDQGLPYLPRamRDEAALtvEDLRAICK-PYa----QGVAPEWARFIIASVDVQA---HYFEVQITA--------FGL 446
WP_048531555 395 YYTDVGVPYLRPdlGRDDGLsvQHLRDHAQ-PVv----KGEAPDWVRFVVISVDVQN---TWFPVQVTG--------FGA 458
WP_083274623 378 TNTSFGLPYTPKsiEAGRLP--DELKKRAR-AYn---yRGEVPEGVRFLVTTVDVQK---DSFVVHTFGiapvtmvgGAQ 448
WP_121815479 368 INTDWGIPYLPRsaVDQRRG--DELMARAE-DYg----KRLVPPKVRFLVASVDVQGgkkRRFVVQVVG--------YGQ 432
WP_099554571 372 VTADQGEAYLPKalAESRSS--ENLMEHAE-DWgttkeNPTVPPGVRFIIATVDVQSgsrSGFVVQVTG--------FGL 440
WP_002433779 368 INTDWGLPYLPRsgLNQRKG--EALQQRAE-PVe----KRRVPAGVQFLVATVDVQGgrnRRFVVQVVG--------YGA 432
WP_012205268 450 GGEQWVIDRFKIteskr-----pgigPNefaplDPaSYPEDWDLLtEKVLLGTWrtTTRD-LEMHPIGVIVDTGGEagrv 523
NP_310990    437 QGERWIVDRYNIrhsl------rcspNGeslpvDPaAYPEDWDLLlTDVFHKTWplASDPdVRMRLMAMAVDTGGEa--- 507
WP_015922975 464 QGERIPIDRFAVaqppdha-prakgdDEryralDPgRYVEDADAL-LDLPERLYpvEGAn-WSLKPCALVIDFNGPa--- 537
WP_010786315 431 NGERWLIDRYNIshtl-------pdeDGvvekiDP-RLPDDWHILiSDVLEKQYplSTHDnRLMPILAMAVDSGGEd--- 499
WP_005612403 447 DGRRAIIDRFPVkdvp------egapGQedrllEPhTYLEDWDAL-LPVMQAVYpvEGAa-YGLRPMALACDFHGKp--- 515
WP_048531555 459 DGSSVVIDRFDLtrpppeapgavpdeEGntrriQPpRYEEDWAVL-EPLAERVIpvAGRd-YGLRPIGVVVDFQGAp--- 533
WP_083274623 449 SMDVYHVDMWKItksr------ridaDGhplklDPaSFKEDWHVLiDQVIEREYplGDGSgRFMKAKLVACDSGGAasaa 522
WP_121815479 433 HGERWVIDRFNIktsl------rcnsHGealqiDPaGYPEDWDLLiSDVLDKEYrlQADDkRTMGIQWMAVDSGGEd--- 503
WP_099554571 441 HNDAWVIDMFRLlkse------rrdeDDerlplDPsAYAEDWDLLiGEVIKRSYplADQSgRRMSIKLTGCDYGGKe--- 511
WP_002433779 433 QGERWIVDRYNIlqsl------rtnaDGesfhiDPaSYPEDWELLrTDVLEKTWaiEGEPgKRMGLMAMAVDSGGEd--- 503
WP_012205268 524 mmqeqgasgkqkgarvfeegktgVTHNAYEWYRr-vRQLglAK-----RVFLYKGGSTKDA-PDMRENMVGKNGKKg--- 593
NP_310990    508 ----------------------gVTDNAYRFWRr-cRSDglGN-----RVFLFKGDGLRRD-RLINRTFPDNTGRSarra 558
WP_015922975 538 ----------------------gWSDNAEKFWRa-rRRDgqGG-----LWWLSIGRGGFQQrDRVWHEAPERGSKGr--- 586
WP_010786315 500 ----------------------gVTDNAYKFWRk-cRRDglAK-----RVYLVKGDSTKRQ-KLITKSYPDNTTRSdrhs 550
WP_005612403 516 ----------------------gVSDRATAFWQa-rRKAgeAS-----KWFMVRGHGGFKVeGRQWYRAPNRASDGg--- 564
WP_048531555 534 ----------------------gVSDNAEKFLLg-rRRAgeGG-----RWRLSRGQGGWKV-PRIRYAAPERASNGk--- 581
WP_083274623 523 avrln---------kaldgpvvsVTSNAYDFWRy-lRLHdpEQrnyhmKFHLLKGEPSRQD-NMIRVDYPDSQQkdkw-a 590
WP_121815479 504 ----------------------gVTGNAYAFWRr-cRKQglKR-----RVYLFKGDSHTRS-KLVNQFFPDNTKRSdrsa 554
WP_099554571 512 ----------------------gVSIQAREFWRrlhTEHglSN-----RFQLVKGDPLKTV-PAYTKKFPDANQkdkf-t 562
WP_002433779 504 ----------------------gVTDNAYEFWRr-cRRDslQR-----KVWLFKGDSQTRA-KLITRTYPDNTGRSsrra 554
WP_012205268 594 --RDDVPLLLCNPNKLSDQVDAGLRRQTPG-PGYIHFPaarhpdtnpdGWVS---------AAFFDELEAEVRGKDGTWR 661
NP_310990    559 raSGDVALWLVQTDAFKDRVNNALWRDTPG-PNYIHFP----------DWLG---------RWFYDELTYEERGSDGKWR 618
WP_015922975 587 -rARGIKLLNMATDRMKESVLAAVGRFEGG-QGAQHVP----------SWFE---------AEHLDELLAERRGAKG-YE 644
WP_010786315 551 saRGDVPLYLLQTDQLKDRISNALAKTSQG-SNYIHFP----------DWIG---------QWFFDELVYEERGADGKWF 610
WP_005612403 565 -kVRDIKLLNIATDKHKDTTFAALGRVDGG-PGALILG----------DWLP---------DARLKEFTAETRTDKG-WK 622
WP_048531555 582 -aARRIKLLTMGVDRIKDTLASALLKAEAGaAGAMYLP----------DWMAg-------nEAQLDEYVAEERKADG-WE 642
WP_083274623 591 iaRGDVPVWKINSNVAKDQVSNMLGRTEPG--GQFHFP----------EWFDvetgeleniDWLYTQLTAEIRLQSG-WE 657
WP_121815479 555 daRGDVPLYLLQTDQLKDRMSNALSRDVPG-PNFVHFP----------DWLG---------EWFYEELTYEERGADGKWK 614
WP_099554571 563 aaRGDVPVGFINSNDMKDALNGFLSRQDKG-GGYWTFP----------IWAP---------KWFYTQMTSEVRTDKG-WE 621
WP_002433779 555 kaAGDVPLYLLQTNALKDRINNALWRDVPG-PNYVHFP----------DWLG---------EWFYDELTYEERSPDGKWT 614
WP_012205268 662 KL-R-AR--NETFDHCRMQRALLHRl--GVfkv--edWARV---Pawlapfeknamait------rqdrrevqtnevvSQ 724
NP_310990    619 KPgR-GA--NEAFDLLVYADALAVLh--GYek---irWPSA---Pdwaqretwlv--------------fpqersgetVS 673
WP_015922975 645 KRqGaAR--NETLDLSVQALAVAEFk--GLnr---idWEAP---Pawaeagpanpfa----------vavsaaaaeaaPA 704
WP_010786315 611 KPgK-GN--NEALDLFCYAHAIAILr--GYer---ikWGDErniPewarlpelnpniinleaphneqaqavsveekstPL 682
WP_005612403 623 KRaNmPR--NESIDLSGYAQALAEHk--GVlk---ldPTNPk--Pwalgglsnpnaveld----avgeappappaaatRA 689
WP_048531555 643 KKpGkQR--NEGVDLSVQARALAEHk--GLlr---idPQAP---Ppwavggienvn-----------avplgparkktEA 701
WP_083274623 658 NRsR-RR--NEAFDLAAYCVAFLRMkdiKIdr---ldWSQP---Pswaaewdvndhvfd------aqgargtkpasesTS 722
WP_121815479 615 KPgK-GA--NEALDLMCYCHAMVIIk--RYdk---idWSRP---Ppyaqeigire--------------ippvwtatkSL 669
WP_099554571 622 KPaN-HRvhNEAWDLSYYALALLRHe--EVralragfWDKP---Ppwaaewdknalv----------fgeqdenpvmpAK 685
WP_002433779 615 KPgK-GA--NEAFDLMVYAHALVILh--GYek---ikWPDA---Pewarrdswvvae----------madgpaaveavTK 673
WP_012205268 725 PT-------AGLLPAKpvaRRrAR-------RSSVAA 747
NP_310990    674 PEltagaekRRRRKKKlrtERaEDnp----wITSGGW 706
WP_015922975 705 PRrr-------------------------arTSRSRY 716
WP_010786315 683 PE-----------KPK---STtQQrwlnggeRKSGGW 705
WP_005612403 690 RKpv----------------------------rRMSY 698
WP_048531555 702 PAra---------------------------pRRIGY 711
WP_083274623 723 LE------------------------------QLGSL 729
WP_121815479 670 PAdha-eekKTQSPPL---------------SETRGF 690
WP_099554571 686 PKky-------------------------dlSALAKR 697
WP_002433779 674 PV-------PAVSQPK---AKsPSrdsvwapSTSGGW 700
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