1TWY,4GD5,4EXL,4ECF


Conserved Protein Domain Family
PBP2_phosphate_like_1

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cd13653: PBP2_phosphate_like_1 
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Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily.
This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.
Statistics
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PSSM-Id: 270371
Aligned: 89 rows
Threshold Bit Score: 197.407
Created: 19-Sep-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
chemical
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:chemical substrate binding site [chemical binding site]
Evidence:
  • Structure:1TWY; Vibrio cholera phosphate-binding protein (Pbp) complexed with phosphate, contacts at 4A.
  • Structure:4GDS; Clostridium perfringens phosphate-binding protein complexed with phosphate, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                ###                                                        ##           
1TWY_A        27 ASEITISGSTSv-aRIXDVLAEKYNQqh-----------------------------peTYVAVQGvGSTAGISLLKKGV 76  Vibrio cholerae...
EEX09106      78 VAELTLSGASVmaeTLLPTLIQGFAAkegltvtrtelaadr----fqlslhqdtrdaplARFVLHVtNTDQGFGDLIAGE 153 Silicibacter la...
ADE55274      23 AENIVVVGSDTigaRLAVQLAETFRAkmat-------------------------qeanVSFELASkGTSTALASLMEGT 77  Coraliomargarit...
YP_001793375 118 TQTLRVHGSNTvgaALAPALLESFLRqqgytevttqpgarl---eervmraanadgtarVEVQLHAhGTATAFTDLAAGT 194 Leptothrix chol...
ACR13182      34 GLLFTMEGSNTigaHLAPTWAEQWMTakgatgvsiepsek-----dneyrilgrnglnpVYIDIHAhGSTTGFAGLLAKT 108 Teredinibacter ...
BAI70761     161 PVILRISGSNTigaKFGPTLVERFLAsegysvvgrrspva------deliitatrdgkqVAVTVAAhGSATAFSDLEQGK 234 Azospirillum sp...
CAM74299      34 QESLLVAGSEEf-hPYAVKLVDGFAQtr-----------------------------pkLDVVVEAgGTAGGLLALKRGA 83  Magnetospirillu...
YP_002018748  97 KTLLRFHGSNTigvNLLPALAEQFLKqegysnvhkvsete------decsivgeqngveGRIEIAAhGSKTAFEGLKYGQ 170 Pelodictyon pha...
ACY17667     278 SEMLAIRGSETigeALLPALADAYRQrh-----------------------------peASVALAAsGPGGGVDALLAGT 328 Haliangium ochr...
YP_001205885  87 DYLVRMSGSNTigaKLAPELAEAWLRslgasevrkvqrsdpqggklpefvisgelsgklVALEVKAhGTGTGARALRSLD 166 Bradyrhizobium ...
Feature 1              #                                                                         
1TWY_A        77 aDIAXTSrYLTESEAqn-----------tLHTFTLAfDGLAIVVNQANpvtnltreqlyGIYKGQITNWKQVg-gNDQKI 144 Vibrio cholerae...
EEX09106     154 aDIALALrEIRDPEIaaardaglgdmtraRRSRVVAlDALVPVVAPDNplaqispadlaRVFSGAVTNWAELg-gPDAPI 232 Silicibacter la...
ADE55274      78 tDIGMASrAPSIKEIakaks-----lgvdFRSIVLGyDSIAIIVNEANpiesisleeleLIFSGDATDWASIshvISGKI 152 Coraliomargarit...
YP_001793375 195 aDVGMASrPIKKDELaatqal--gdlssaGSEHVIAlDGLAVVVNPANpvqrlsieqlrRVFSGQVTNWAEVg-gTSGPI 271 Leptothrix chol...
ACR13182     109 aDIAMASrAIKSSEVeslaadn-gdmldfSAEHVVAiDGLAVIVHPANridsltvsqiqQIFAGEIRNWIDVg-gANRPI 186 Teredinibacter ...
BAI70761     235 tDIGMASrPISAAEVnrlktl--gdmtspSNENVVAlDGLAVVVHRSNplaalstaqirDLFNGKATDWSQVg-gRAGPV 311 Azospirillum sp...
CAM74299      84 iDVALTSrELTATEDek-----------lTRAYLVArDAIALVVHPGNpvgnldrkqaaAILRGEVRDWGKLpggSAGPI 152 Magnetospirillu...
YP_002018748 171 cDIGMASrPIKNDEWqalkpvv-gdlrsnGSEFVLAlDGIAVIVHPSNpikslsvsqlaDIFSGTIKEWSQVg-gLNGAI 248 Pelodictyon pha...
ACY17667     329 vDIAAASrPISADELaraaa-----relsIEEFVIGyDGVAIIVHPDNpvraldlsqlrALFSGQVASWSALg-gADRAV 402 Haliangium ochr...
YP_001205885 167 aDIWMASaSVTDEQAaalaav--gdmrsaRSEHIVGlDGIAVIVSPSSrlgtltkaqvsDIFTGRVSNWSALg-lPPGPI 243 Bradyrhizobium ...
Feature 1                 #                                                                      
1TWY_A       145 AVVTREASSGTRYSFESLXgltktvkdrevsdvaPTALVVn----------SNSXXKTLVNHNtQAVGFISIGSVDKS-- 212 Vibrio cholerae...
EEX09106     233 AVHLPHTGSGVAQAVQDQLmkpsd------aqfaETVIRHa----------RGSDLVSAIARDpFAIGIATLAQANGLr- 295 Silicibacter la...
ADE55274     153 SAYTRNTASGTYSILQEKAmksr--------nygKNTQKLa----------GNEQIVEEVAANvNGIGYVGMAYATSKg- 213 Coraliomargarit...
YP_001793375 272 VVHARDDKSGTYDTFKSLVlgkd--------alvGTARRHe----------DSTALSDAVALDpQAIGFIGLPYVRNAs- 332 Leptothrix chol...
ACR13182     187 TVYARDDKSGTYDTFKSLVlkkt-------hklvASAGRYe----------SNDNLSDSVAADpSGIGFVGLASVRSAk- 248 Teredinibacter ...
BAI70761     312 HLFARDHNSGTFDTFQALVlgkt--------plsDKAQRFe----------DSRELANAVAADpNGIGFIGLPYIGPTk- 372 Azospirillum sp...
CAM74299     153 RLYRRKADAGTQKALDKMVlana--------empSSAIVMe----------SGHAMHDRLAADvQGFGFLSLHDVTPA-- 212 Magnetospirillu...
YP_002018748 249 TIYARDENSGTRDFFNDAVlkkyg------ktlaGDALLLe----------NSKKLSASVATNpNAIGFIGLNYIGSNh- 311 Pelodictyon pha...
ACY17667     403 QLFGRPQGAGTRALFEAMVfqrpdt----gaeanDGDGAAasfapgvrepaSNRELIAAVAADpGAVAYLSTSWLRPEvv 478 Haliangium ochr...
YP_001205885 244 NLYARDKESGTRKTFEELVlgpgar---mapltaKQPNGYe----------DSERLSDDVASDpNGIGFVGMAYVGAAk- 309 Bradyrhizobium ...
Feature 1                                                                            
1TWY_A       213 ----VKAIQFekadpts---dniakhtYQLSRPFLILHYSDna-dEQTKEFIAFLKSesakKLIVEYG 272 Vibrio cholerae O1 biovar e...
EEX09106     296 ----ALPLAGgcghalratrpaiktedYPLTLPMFLYLPQRrl-pKIARQFLAYALGpeaqMVIRKAG 358 Silicibacter lacuscaerulens...
ADE55274     214 ---iKAIPIDglkp---------gkldYPLNRKLRFIVDRNkplsPMANDFIGFTLSpegqAIVESVN 269 Coraliomargarita akajimensi...
YP_001793375 333 ----AVSVSDgaavplrpshftvatedYALSRRLYLYVGREa--pELARRFVTYAASdeaqRIADAQG 394 Leptothrix cholodnii SP-6
ACR13182     249 ----PVAVSEartlallpekihvatedYPLSRRLFMYTPEKvt-dPNILEFLKFAQGsagqAVVEKIG 311 Teredinibacter turnerae T7902
BAI70761     373 ----ALAVAEkdanpllptvftvstedYPLSRRLFLYVPTTsi-nPLVLNFIEFALSpagqGIAAEVG 435 Azospirillum sp. B510
CAM74299     213 ----VKVLAIdgvgmsr---asilggsYPFTRSFFCVTHGAe--kDVVRAFLSFAQEpqgqNILKGAG 271 Magnetospirillum gryphiswal...
YP_002018748 312 ----ALSLSDvgvqarkpspftvktedYILSRRLFLYASETsk-nPLVARFIDFATGtagqQIVASIG 374 Pelodictyon phaeoclathratif...
ACY17667     479 avalSEEPGGdaveptp---esirtgrYPLHHPLHMYARGPl--dNAVARFLLFALSpggqAIVRAHG 541 Haliangium ochraceum DSM 14365
YP_001205885 310 ----ALAISDgsaialapteftvrtenYPLSRRLFLYTADQp--rPEVGRFIKFALSkegqEVAQRTV 371 Bradyrhizobium sp. ORS278

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