Conserved Protein Domain Family
CLP1

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COG5623: CLP1 
Predicted GTPase subunit of the pre-mRNA cleavage complex [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 227910
Aligned: 3 rows
Threshold Bit Score: 547.618
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1723461    1 MKEIFIPKECEWRFEVDEP-AIQIRLVSGNAEYFGTELALGPPYHFTRVKGAIYTWQGCTLEVEGEPSVEYVAEETP--- 76  fission yeast
19173653   4 VMEIRLQPNQEFRIEVNETqKLKVMVVSGLAEIKGQELLNERWYAFRNTKTFIFTFSGCKLKVEGACDLQYVSDTTN--- 80  Encephalitozoon cun...
6324824   23 WHKLVIPKGSDWQIDLKAEgKLIVKVNSGIVEIFGTELAVDDEYTFQNWKFPIYAVEETELLWKCPDLTTNTITVKPnht 102 baker's yeast
1723461   77 MSTYLNLHFALEGLRlqaenaAANDEssYGPCVCLIGPRSCGKTSVLKILESYALKQ-SRHPICVNLDPTQPMLALPGSI 155 fission yeast
19173653  81 VPLIFNILSFFSKRG-------FDYS--KLKTFMVVG---NGRSTFCFTLINFFVRL-GKKVLFTEVDPS-KGNIFPGAL 146 Encephalitozoon cun...
6324824  103 MKYIYNLHFMLEKIR------MSNFE---GPRVVIVGGSQTGKTSLSRTLCSYALKFnAYQPLYINLDPQQPIFTVPGCI 173 baker's yeast
1723461  156 SAFHNATILDIQDADgFGASTSTGPTHVLAKVPLVYNFGLDSPLDNPKLYKLSLSRLALAVHSRMSQSKDARVSGCLVDT 235 fission yeast
19173653 147 STIHVDALIDCIEGL-------------RLKNPLSFYYGSTEIT-NMELYDLQTTKLQEAIKAKN--VEDLHLILCPEGT 210 Encephalitozoon cun...
6324824  174 SATPISDILDAQLPT-WGQSLTSGATLLHNKQPMVKNFGLERINENKDLYLECISQLGQVVGQRLHLDPQVRRSGCIVDT 252 baker's yeast
1723461  236 SSIQENAEKYQDILHSIITDFRINIIIVLGSE--RLYSSMKRKYADATWLS-VVKVSSSGGCIDREEEWIQQFQARCIKQ 312 fission yeast
19173653 211 -S---------AFYNTLIKRFEVDRVVVVGDE--RLYHSLDVIAEKLMINR-----S---GFVE-EKEVG-----RSISR 264 Encephalitozoon cun...
6324824  253 PSISQLDENLAELHH-IIEKLNVNIMLVLCSEtdPLWEKVKKTFGPELGNNnIFFIPKLDGVSAVDDVYKRSLQRTSIRE 331 baker's yeast
1723461  313 YFYGDDRMPLSPLSMIVDSTQLVVYRVleasesgpkssvlplgfeeentqsEKQDGNTSLRLHGKGEFLERISTEAMTIL 392 fission yeast
19173653 265 YFKG-VNNEYTPFTFNVKYKWRVVRIG------------------------EMYVAPVSALPLGSTRKVGCVEASDVEVA 319 Encephalitozoon cun...
6324824  332 YFYGSLDTALSPYAIGVDYEDLTIWK----------------------------PSNVFDNEVGRVELFPVTITPSN--L 381 baker's yeast
1723461  393 QNSILAVSSVGEDEDEATVVDSCIIGYVFVSDVDDVKNRMTLLSPVPEQLPSNALIMGTCKWQE 456 fission yeast
19173653 320 ENSVLGISEAREIED---VAGSPVLGYVVVINAGAFK----ILCTQPRLPKYTFLVQGDLKHVE 376 Encephalitozoon cuniculi
6324824  382 QHAIIAITFAERRADQATVIKSPILGFALITEVNEKRRKLRVLLPVPGRLPSKAMILTSYRYLE 445 baker's yeast
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