Conserved Protein Domain Family
POB3

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COG5165: POB3 
Nucleosome-binding factor SPN, POB3 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Statistics
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PSSM-Id: 227494
Aligned: 3 rows
Threshold Bit Score: 588.51
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2497082    1 MSTDFDRIYLNQSKFSGRFRIADSGLGWKISTSggsaanqARKPFLLPATELSTVQWSRGCRGYDLKINTKNQGVIQLDG 80  baker's yeast
19074524   3 VLTLNDCFLKSDGDKKATVKISRDGIAIKAGDG-------E--VYTVERNEVKDAELFYGVR--KMAIRVFGNAVYEINN 71  Encephalitozoon cun...
19113107   4 KTVQYDNIYLNLSEKPGKLRIAPSGLGWK-SPS-------LAEPFTLPISEIRRFCWSRFARGYELKIILKSKDPVSLDG 75  fission yeast
2497082   81 FSQDDYNLIKNDFHRRFNIQVEQREHSLRGWNWGKTDLARNEMVFALNGKPTFEIPYARINNTNLTSKNEVGIEFNIQDE 160 baker's yeast
19074524  72 VDQNYIDELKRIFSEYFRITLYVKELEIADVLCGELGINGQKALEFRNTKTIFEIPVDDIESV-VDIRNELSVSLR---- 146 Encephalitozoon cun...
19113107  76 FSQEDLDDLINVIKQNFDMGIEQKEFSIKGWNWGEANFLGSELVFDVNSRPAFEIPISAVTNTNLSGKNEVALEFSTTDD 155 fission yeast
2497082  161 EYQPAG--DELVEMRFYIPGviqtnvdenmtkkeessnevVPKKEDGAEGEDVqmaveEKSMAEAFYEELKEKADIGEVA 238 baker's yeast
19074524 147 ----------DMEIRFVSDR---------------------KTIEEIKGGCSS-------------------------SV 170 Encephalitozoon cun...
19113107 156 KQIPSAqvDELVEMRLYVPG--------------------TTAKEDAADGEEV-----EQNAANLFYESLKERADIGQAA 210 fission yeast
2497082  239 GDAIVSFQDVFFTTPRGRYDIDIYKNSIRLRGKTYEYKLQHRQIQRIVSLPK--ADDIHHLLVLAIEPPLRQGQTTYPFL 316 baker's yeast
19074524 171 DDEILKMEGLSLAYPRGKFNFIFFRDYLRLVGSSYDHKIYYKSIKMLYVLEKgyIRDGERYVVIGADPPIRQGQTRYDHV 250 Encephalitozoon cun...
19113107 211 GDAIVSFSEILLLTPRGRYDIDMYETCMRLRGKTYDYKVEYSSINSLFLLPK--PDEQHVVFVIGLEPPLRQGQTRYPFL 288 fission yeast
2497082  317 VLQFQKDEETEVQLNLEDEDYEENYKDKLKKQYDAKTHIVLSHVLKGLTDRRVIVPGEYKSKYDQCAVSCSFKANEGYLY 396 baker's yeast
19074524 251 VVAF---DDVERELSVSDE--------RLKGEYSGLLSEIFAEVMEALCVIKAVR-SSFESRDGMRCLRCAMKAYEGQLY 318 Encephalitozoon cun...
19113107 289 VTQFVRDEDMEVDLNIEETVLKEKYADKVKASYDQPAFEVVSQIFRGLTGRKVTTPAEFLSHEGHAAVKCSYKANEGQLY 368 fission yeast
2497082  397 PLDNAFFFLTKPTLYIPFSDVSMVNISRAGQTSTSSRTFDLEVVLRSNrGSTTFANISKEEQQLLEQFLKSKNLRVKNEd 476 baker's yeast
19074524 319 PLDDCMLFLPK-AVRLDLGEISLVEFSRINLSSMQAKTFDMTLFCEGP---YTFNGLSKDEFGALEQYFHGKGIKARSE- 393 Encephalitozoon cun...
19113107 369 CLDKSFLFIPKPTLLMNTSDITRVTLSRVGMSVSAARTFDLTFTLRSG-TSYQFSNINRVEQSALVAFLESKQIKIHND- 446 fission yeast
2497082  477 rEVQERLQTALGSDSDEEDINMGSAGEDDESVDEDFQVSSDNDadeVAEEFDSDAALSDAEGGSDEERPS 546 baker's yeast
19074524 394 -------VIDDGAISDSE---------EDEYESENDSMVVDSD------EYDLQ---------------- 425 Encephalitozoon cuniculi
19113107 447 -LADETQQTLLTSALDDEDEEGDEEMEEALSEDEDFQAESESD---VAEEYDENAESSDEEGASGAEGSE 512 fission yeast
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