Conserved Protein Domain Family
HNH_3

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pfam13392: HNH_3 
HNH endonuclease
This is a zinc-binding loop of Fold group 7 as found in endo-deoxy-ribonucleases and HNH nucleases.
Statistics
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PSSM-Id: 433169
Aligned: 39 rows
Threshold Bit Score: 43.3491
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q84408            333 LKFHRKVVELFFGK-LP-KTveingkthhLIVDHIDDDKQNARL--DNLQLLTNQENSK 387 Paramecium bursaria Chlorella v...
ABK54391           61 SATHIIAYTHYHGY-IP-NK---------MQVDHLCNNRLCCNP--EHLELVTHQENQR 106
WP_012654388       53 VAVHLVMWTNEFGY-IP-GK---------KEIDHVCRNRLCVRPhpDHLELVTKKRNAL 100 Agrobacterium vitis
ABS03245           41 RLAHRVAWYQATGR-WPqSG---------LVLDHLCDVKACVNH--EHLVEVTNRHNVL 87 
Q8XUJ5             52 MRAHRVAYELCVAP-IP-DG---------MVACHRCDNRACVNP--GHIFIATQRENIL 97  Ralstonia solanacearum
VBC:MMAR_3906      67 DRVHRWAFRAYVGP-IE-DG---------LHVLHHCDNKRCCNP--THLFLGTHADNMK 112
jgi:Daci_4702     190 ALVHRIVWEQHRGP-IP-EG---------HAVIFHDGDTSNFDI--NNLRCIPRAELSR 235
jgi:Shel_15820    162 RYKHHLAWEEANGRpVP-EG---------CAIVFADGDPGNCDP--GNLVAVPKRYAGQ 208
wucgs:EUBREC_2063 189 EFVHRAVWEEHNGP-VP-EG---------KMVSFLDGNKDNCNI--ENLVLIDNEENLE 234
WP_013486281      116 KMKHVVIWEAANGP-VP-DG---------HVIIFGDGNRLNFSV--DNLILVSKRELLV 161 Ethanoligenens harbinense
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