3L2Q


Conserved Protein Domain Family
Integrase_H2C2

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pfam17921: Integrase_H2C2 
Integrase zinc binding domain
This zinc binding domain is found in a wide variety of integrase proteins.
Statistics
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PSSM-Id: 465569
Aligned: 476 rows
Threshold Bit Score: 30.6769
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3L2Q_A           52 PPQSDRQKIVLQAHNL--A-HTGREATLLKIANLYWWPNMRKDVVKQLGRCQQCLITNAS 108 
107_pfamImport    1 IPEQMARKLTLETHRI--FgHPGRYKTYHLIKEIGTFRNMHRIVMNTIRGCDECQRNKPI 58  
84_pfamImport     1 VPLHRVHELILKFHLH--FgHVGPKKCIAAIREVCYFRSLSANVRSVVKSCDTCQRAKCS 58  
17_pfamImport     1 LPSHLVHKVVKFFHDY--YaHVGPLKTAQSLKNVCYFPSFNKTVRFIVKACDVCQRCKPK 58  
KDQ71468        206 LPTELEVPVIEFVHAS--FgHLGTEKCMAQVANTFHVKSLGRKVRKLISSCDICQRVRHP 263 
KMQ91056       1460 IPKEIAWELTDLIHRF--LvHFGTDKTIEFVSRFFKIKNMERIVRDMVASCETCIASKYY 1517
KMQ88181        199 VPEAVKWNLVKRVHAY--LlHFGTDKVTDFLKQYFMLNNLERVVRDVVASCDVCQSTKYY 256 
43_pfamImport     1 LPKSLHKEAVQLVHVE--LgHPGVQRTYLSLLDRFDTEAILNTVREVILQCSVCQISKPS 58  
96_pfamImport     1 IDSKLLKDLFSYEHESplGgHFGPEKTYFQIARRFWCQYLYDLVKQLCDSCTICQISKPT 60  
EDK47246        821 VGKSVARMVLEKVHSFg---HFGITKCYFAIQPYLFVPKLLEVVTDYINSCDHCQRAKAI 877 
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