3B13,2YIN


Conserved Protein Domain Family
DHR2_DOCK2

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cd11706: DHR2_DOCK2 
Click on image for an interactive view with Cn3D
Dock Homology Region 2, a GEF domain, of Class A Dedicator of Cytokinesis 2
Dock2 is a hematopoietic cell-specific, class A DOCK and is an atypical guanine nucleotide exchange factor (GEF) that lacks the conventional Dbl homology (DH) domain. As a GEF, it activates small GTPases by exchanging bound GDP for free GTP. It plays an important role in lymphocyte migration and activation, T-cell differentiation, neutrophil chemotaxis, and type I interferon induction. DOCK proteins are divided into four classes (A-D) based on sequence similarity and domain architecture; class A includes Dock1, 2 and 5. All DOCKs contain two homology domains: the DHR-1 (Dock homology region-1), also called CZH1 (CED-5, Dock180, and MBC-zizimin homology 1), and DHR-2 (also called CZH2 or Docker). The DHR-1 domain binds phosphatidylinositol-3,4,5-triphosphate. This alignment model represents the DHR-2 domain of Dock2, which contains the catalytic GEF activity for Rac and/or Cdc42. Class A DOCKs, like Dock2, are specific GEFs for Rac and they contain an SH3 domain at the N-terminal region and a PxxP motif at the C-terminus.
Statistics
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PSSM-Id: 212579
Aligned: 4 rows
Threshold Bit Score: 890.878
Created: 21-Mar-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 40 residues -Click on image for an interactive view with Cn3D
Feature 1:Rac binding site [polypeptide binding site]
Evidence:
  • Structure:2YIN: Human Dock2 binds Rac1; contacts at 4A.
  • Structure:3B13: Human Dock2 DHR-2 domain binds Rac1 mutant; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
3B13_A          9 RMSCTVNLLNFYKDNNREEMYIRYLYKLRDLHLDcDNYTEAAYTLLLHTWLLKWSDEQCasqvmqtgqqhpqTHRQLKET 88   human
2YIN_A         14 RMSCTVNLLNFYKDNNREEMYIRYLYKLRDLHLDcDNYTEAAYTLLLHTWLLKWSDEQCasqvmqtgqqhpqTHRQLKET 93   human
XP_427075    1211 SMSCTVNLLNFYKEIDRQAMYIRYLYKLKDLHISyENYTEGAYTLLLHARLLKWSDEANtapmqglhspslhTQRQLKEA 1290 chicken
XP_003444731 1205 RMSCTVNLLNFYKDINREAMYIRYLYKLRDLHLEcENYTEAAYTLLLHSRLLKWSDDMCsqfef----hgsqTQRQLKET 1280 Nile tilapia
Feature 1                                                                                         
3B13_A         89 LYETIIGYFDkGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIMKILRPKPDYFAVGYYGQGFPSFLRNK 168  human
2YIN_A         94 LYETIIGYFDkGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQQAKFYESIMKILRPKPDYFAVGYYGQGFPSFLRNK 173  human
XP_427075    1291 LYNQIVNYFDqGKMWEEAIHICKELAEQYESEIFDYEMLSEILQREAKFYEKILKVLRPSPDYFAVGYYGQGFPTFLRNK 1370 chicken
XP_003444731 1281 LYDTIIDYFDkGKMWEEAITLCKELAEQYENEIFDYELLSKRLEKQAKFYENIMKILRPKPDYFAVGYYGQGYPPFLRNK 1360 Nile tilapia
Feature 1                 # ####               ###                ###                             
3B13_A        169 VFIYRGKEYERREDFQMQLMTQFPNAEKMNTTSAPGDDvknaPGQYIQCFTVQPVLDehPRFKNKPVPDQIINFYKsNYV 248  human
2YIN_A        174 VFIYRGKEYERREDFQMQLMTQFPNAEKMNTTSAPGDDvknaPGQYIQCFTVQPVLDehPRFKNKPVPDQIINFYKsNYV 253  human
XP_427075    1371 VFIYRGKEYERREDFEMRLLSPFPNAEKLQTTSPPGPDitqsPGQYIQCFTVQPVEEprIRLRDRSIPEQITNFYKaNHV 1450 chicken
XP_003444731 1361 VFIHRGKEYERREDFQNQLMSQFPSAVRLNTTTMPGDDiknsPLQYIQCFTVQPVLEipPRLKNKPVPDQIINFYKsNYV 1440 Nile tilapia
Feature 1             ####          ##  #                                      #   #              
3B13_A        249 QRFHYSRPVRRGTVDPENEFASMWIERTSFVTAYKLPGILRWFEVVHMSQTTISPLENAIETMSTANEKILMMINQYqsD 328  human
2YIN_A        254 QRFHYSRPVRRGTVDPENEFASMWIERTSFVTAYKLPGILRWFEVVHMSQTTISPLENAIETMSTANEKILMMINQYqsD 333  human
XP_427075    1451 QKFSYSRPFKKGPKDPDNEFANMWIERTTFVTAYPLPGILRWFAVTSTTTTVISPLENAIETMMKTNEKILSEINRHqnD 1530 chicken
XP_003444731 1441 QRFHYSRPVRKGPVDPNNEFASMWIERTTFTTVYKLPGILRWFEATDMKHTTLSPLENAIETMESTNEKILTMINQYqsD 1520 Nile tilapia
Feature 1              ## ##   ##  #######  #                             #               # ##  # 
3B13_A        329 ETLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYvrDHPEDQDKLTHLKDLIAWQIPFLGAGIKIHEKRVSdNLRPFH 408  human
2YIN_A        334 ETLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYvrDHPEDQDKLTHLKDLIAWQIPFLGAGIKIHEKRVSdNLRPFH 413  human
XP_427075    1531 PSLPINPLSMLLNGIVDPAVMGGFAKYETAFFQEPYleEHPEDQGNIERLKDLIAWQIPLLSEGVRIHGQKVTeDLRPFH 1610 chicken
XP_003444731 1521 WSLPINPLSMLLNGIVDPAVMGGFAKYEKAFFTEEYtqQHQEDRDKLLRLKDLIAWQIPLLGGGISLHGKRVTdDLRPFH 1600 Nile tilapia
Feature 1          #                   
3B13_A        409 DRMEECFKNLKMKVEKEYGVR 429  human
2YIN_A        414 DRMEECFKNLKMKVEKEYGVR 434  human
XP_427075    1611 ERMEQCFVQLRAKVESQYGVR 1631 chicken
XP_003444731 1601 ERMEECFKQLKKKVEKEYGAR 1621 Nile tilapia

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