Conserved Protein Domain Family
CD63_LEL

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cd03166: CD63_LEL 
Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization.
Statistics
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PSSM-Id: 239419
Aligned: 7 rows
Threshold Bit Score: 144.155
Created: 7-Nov-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
dimer interface
Feature 1:dimer interface [polypeptide binding site]
Evidence:
  • Comment:dimeric assembly observed in the crystal is predicted to resemble quaternary structure of intact CD81 at the cell surface

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      #    #   # ##  #              #  ##  ##                                        
AAH54957  105 YVYKDKLRTAFEDSFKNGMSKYntt-kdITESIDLLQKEFKCCGAFNAtdwkqyppfngtdaVPDSCCKTiiagcgkd-- 181 African clawed frog
CAG46893  105 YVFRDKVMSEFNNNFRQQMENYpkn-nhTASILDRMQADFKCCGAANYtdwekip-smsknrVPDSCCINvtvgcginf- 181 human
AAH64300  103 YIFRGKVNELLDQSFNTMIAGYnkt-eeYRTTLDSIQKQLKCCGGNSSsdwvnf--sadhisVPDSCCKNvtkncgigam 179 zebrafish
AAT94062  105 YVFRGKLTVIVHDGLNDMVTKYsngtaeFKKALDNLQVDLKCCGVTNAtdwkgkf-gsvpdsVPDSCCINvtagcgqgam 183 rainbow trout
CAG03950   97 EIAAAIAGYIFRNSLTDMISNYkngtadFRKTLDKMQEDLKCCGVNSSadwrsf--aldgnsVPDSCCINvtkdcgknkm 174 Tetraodon nigrovir...
BAC25821  116 YVFRDQVKSEFNKSFQQQMQNYlkd-nkTATILDKLQKENNCCGASNYtdwenip-gmakdrVPDSCCINitvgcgndf- 192 house mouse
XP_588080 105 YMLEDKVMSESNKDFQQQIQNYqkn-nhMSPIMDRMQEHFKCCRAANYtdweyi--llttkrVPGSYCVSitkgcginf- 180 cow
Feature 1                            
AAH54957  182 -psatintdGCATGIDQWVKKNI 203 African clawed frog
CAG46893  182 -nekaihkeGCVEKIGGWLRKNV 203 human
AAH64300  180 tkptviyleGCQPILETRIKENI 202 zebrafish
AAT94062  184 gdalkihqtGCETVVEKLLKKNI 206 rainbow trout
CAG03950  175 tdgsvvylkGCHDAVVEFLKKNI 197 Tetraodon nigroviridis
BAC25821  193 -kestihtqGCVETIAIWLRKNI 214 house mouse
XP_588080 181 -sikemhaeSCVAKTGGWLRSKV 202 cow

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