Conserved Protein Domain Family
Gag_MA
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pfam01140: Gag_MA 
Matrix protein (MA), p15
The matrix protein, p15, is encoded by the gag gene. MA is involved in pathogenicity.
Links
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Statistics
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PSSM-Id: 426076
Aligned: 4 rows
Threshold Bit Score: 83.5844
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
EGV94693        2 GQQLTTPLSLTLGHWQDVLSRARKESVEIRKKKWRTLCFSEWPALNTGWPRDGTFDLTTILQVKTRVFQPGPWGYPDQVP 81  
Q27ID9          2 GQTVTTPLSLTLQHWGDVQRIASNQSVDVKKRRWVTFCSAEWPTFNVGWPQDGTFNLGVISQVKSRVFCPGPHGHPDQVP 81   Xenotropic Mu...
P03332          2 GQTVTTPLSLTLGHWKDVERIAHNQSVDVKKRRWVTFCSAEWPTFNVGWPRDGTFNRDLITQVKIKVFSPGPHGHPDQVP 81   Moloney murin...
XP_023109339  394 GRAVPAALS-PLKEVSPLPSRGCSQPEPLPRPSSDSESAATWLRL-------------------TPASAPPPASDATRPP 453  domestic cat

EGV94693       82 YIVTWESLSRDPPPWVRPFLPPRLSGPcpTPLPLPaPLIPTPSAPP 127 
Q27ID9         82 YIVTWEALAYDPPPWVKPFVSPKPPPL--PTAPVL-PPGPSAQPPS 124  Xenotropic MuLV-related virus VP62
P03332         82 YIVTWEALAFDPPPWVKPFVHPKPPPPlpPSAPSL-PLEPPRSTPP 126  Moloney murine leukemia virus isolate Shinnick
XP_023109339  454 PAAQAGGTAAPPE---RPALTPAPPAGqrVAFLGGrAPLPPASAPP 496  domestic cat
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