Conserved Protein Domain Family
parC_Gpos

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TIGR01061: parC_Gpos 
DNA topoisomerase IV, A subunit, Gram-positive
Operationally, topoisomerase IV is a type II topoisomerase required for the decatenation of chromosome segregation. Not every bacterium has both a topo II and a topo IV. The topo IV families of the Gram-positive bacteria and the Gram-negative bacteria appear not to represent a single clade among the type II topoisomerases, and are represented by separate models for this reason. [DNA metabolism, DNA replication, recombination, and repair]
Statistics
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PSSM-Id: 273422
Aligned: 4 rows
Threshold Bit Score: 1161.87
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAF30879   8 IINTPLDNIVGESYAKYAKYIIQDRALPDIRDGLKPVQRRILYAMSELGIFYDKPYKKSARTVGEVIGKYHPHGDSSIYE 87  Ureaplasma parvum s...
AAF85901   4 IQNMSLEDIMGERFGRYSKYIIQDRALPDIRDGLKPVQRRILYSMNKDSNTFDKSYRKSAKSVGNIMGNFHPHGDSSIYD 83  Streptococcus pneum...
Q45066     7 FHDLPLEEVIGDRFGRYSKYIIQDRALPDARDGLKPVQRRILYAMHTDGNTFDKNFRKAAKTVGNVIGNYHPHGDSSVYE 86  Bacillus subtilis s...
P47446     8 LFQKAIEEVFAVSFSKYAKYIIQDRALPDLRDGLKPVQRRILYGMFQMGLKPTTPYKKSARAVGEIMGKYHPHGDSSIYD 87  Mycoplasma genitali...
AAF30879  88 AMVRMSQDWKNNLCLLDMHGNKGSIDGDNAAAMRYTEARLSKIASVMLANLKKDVVKFSPNFDDSEKEPSILPSLFPNLL 167 Ureaplasma parvum s...
AAF85901  84 AMVRMSQNWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKKTVPFAWNFDDTEKEPTVLPAAFPNLL 163 Streptococcus pneum...
Q45066    87 AMVRMSQDWKVRNVLIEMHGNNGSIDGDPPAAMRYTEARLSPIASELLRDIDKNTVEFVPNFDDTSKEPVVLPAMFPNLL 166 Bacillus subtilis s...
P47446    88 AIIRMSQSWKNNWTTVSIHGNNGSVDGDNAAAMRYTETRLSLYGFELLKDIDKKLVSFINNFDDSEKEPTVLPTLLPNLF 167 Mycoplasma genitali...
AAF30879 168 INGATGIASGYATNIPPHNPNEVFDALIYRIDHPDCSVEKLIEICPAPDFPTGGEIHDLNGCANAHKTGEGKFIIRACID 247 Ureaplasma parvum s...
AAF85901 164 VNGSTGISAGYATDIPPHNLAEVIDAAVYMIDHPTAKIDKLMEFLPGPDFPTGAIIQGRDEIKKAYETGKGRVVVRSKTE 243 Streptococcus pneum...
Q45066   167 VNGSTGISAGYATDIPPHHLGEVIDAVIKRIQMPSCSVDELMEVIKGPDFPTGGIIQGVDGIRKAYETGKGKIIIRGKAE 246 Bacillus subtilis s...
P47446   168 INGASGIAAGYATNIAPHNTNELLDSLCLRIDQPNCELKQILKIVKGPDFPTGGNVYFEKSLSDIYQAGKGKFIIQA--K 245 Mycoplasma genitali...
AAF30879 248 FKINDNKINQIIISSIPYETNKALIIKEIEDIIYNKEVAGLIEVRDESDAKGISIIIDTKKDINLENVKNYLYKKTNLEI 327 Ureaplasma parvum s...
AAF85901 244 IEKLKGGKEQIVITEIPYEINKANLVKKIDDVRVNNKVAGIAEVRDESDRDGLRIAIELKKDANTELVLNYLFKYTDLQI 323 Streptococcus pneum...
Q45066   247 IETIRGGREQIVITEIPFEVNKANLVKKMDEFRIDKKVEGISEVRDETDRTGLRVVIELKKEADAKGILNFLYKNTDLQI 326 Bacillus subtilis s...
P47446   246 YEVNKN-LNQIEITQIPYETLKANIVKQIEEIIFDNKLSAIESVIDSSDRNGIRIIIKHKDFLPAEKIMAFLFKHTQLQV 324 Mycoplasma genitali...
AAF30879 328 SYNTKFIAIVHRTPTLVNLSTYLDAQINHSLDVINKVDLYDLNKILLRIEIVEGLIKCVDLIDEIIKIIRASESRQDAKN 407 Ureaplasma parvum s...
AAF85901 324 NYNFNMVAIDNFTPRQVGIVPILSSYIAHRREVILARSPFDKEKAEKRLRIVEGLIRVISILDEVIALIRASENKADPKE 403 Streptococcus pneum...
Q45066   327 TYNFNMVAIHNRRPMLMSLPSILDAYIGHQKEVVTNRSVYELQKAKDRHHIVEGLMKALSILDEVIATIRSSSDKRDAKN 406 Bacillus subtilis s...
P47446   325 NFNLNNTVIANRFPIQIGLLSYLDHFLKFCHELIINKAKYELELASKRLEIILGLIKAISIIDKIIKLIRSAVDKSDARE 404 Mycoplasma genitali...
AAF30879 408 TLIQVFNFTNNQAEAIIMMRLHNLTRTDIFDLKNEWQTLQDEAKTLQERINSLQVRKNYLKQKMIEFKKTFGFERKTKLF 487 Ureaplasma parvum s...
AAF85901 404 NLKVSYDFTEEQAEAIVTLQLYRLTNTDVVVLQEEEAELREKIAMLAAIIGDERTMYNLMKKELREVKKNFATPRLSSLE 483 Streptococcus pneum...
Q45066   407 NLIAKYEFTEPQAEAIVSLQLYRLTNTDITALKEEAEELGKKIEELESILSNDKKLLKVITNSLKALKKKYADTRRSVIE 486 Bacillus subtilis s...
P47446   405 KLIDNFKFTFNQAEAIVSLRLYQLTNTDIFELNQEQNELEKTVISSEQLIASEKARNKLLKKQFEGYKKQFHQQRRSQIC 484 Mycoplasma genitali...
AAF30879 488 DELVKVEINEDQMIEKQNLNLVISRDG-YIKTVSKKSFESSKYDELGLKTNDILFYHNIINSHDKILIITSKAKLINLVA 566 Ureaplasma parvum s...
AAF85901 484 DTAKAIEIDTASLIAEEDTYVSVTKAG-YIKRTSPRSFAASTLEEIGKRDDDRLIFVQSAKTTQHLLMFTSLGNVIYRPI 562 Streptococcus pneum...
Q45066   487 EKIEEIKINLEVMVASEDVYVTVTKDG-YLKRTSQRSFAASNGQDFGMKDTDRMLHQFEMNTTDVLLLFTNKGSYIYCPV 565 Bacillus subtilis s...
P47446   485 GFINQKKVEESELIENKTYGVLITKAGnYHKFESNQLLKST--TDFKSESDTIIFAQTIAN-TDQIFIVTSLGNIINIPV 561 Mycoplasma genitali...
AAF30879 567 HKITSMRWKDVGEHLNNYVK-FDANEKVIAVYIWNEQFkiDEYQLVLASRLNLIKRIELSELDINKN--SKQISIMKLND 643 Ureaplasma parvum s...
AAF85901 563 HELADIRWKDIGEHLSQTITnFETNEAILYVEVLDQFD--DATTYFAATRLGQIKRVERKEFTPWRTyrSKSVKYAKLKD 640 Streptococcus pneum...
Q45066   566 HQLPDIRWKDMGQHFSNLIT-IDRDETIVKAIPIKEFD--PSAYLLFFTKNGMVKKTELTHYKAQRy--SKALVALNLKG 640 Bacillus subtilis s...
P47446   562 YKLAFNSKNKLASLVSKKPI-LLEYETIVFVGTMNSv---NQPILVLTSKLGMVKRIDLTKLNIKP---LKATLCISLRD 634 Mycoplasma genitali...
AAF30879 644 NDNLISANLIKKghNQFIIAISKLGLALLFLVHEINCLNRLAKGIKIMKLKPNDEVSAILITPNNgYNVQLFLERGSKCF 723 Ureaplasma parvum s...
AAF85901 641 DTDQIVAVAPIK--LDDVVLVSQNGYALRFNIEEVPVVGAKAAGVKAMNLKEDDVLQSGFICNTS-SFYLLTQRGSLKRV 717 Streptococcus pneum...
Q45066   641 EDELIDVHVTNG--ESQIFMATHLGYGLWFGEDEVNVVGARAAGVKGINLKEDDFVVSGEILQQSdSIVLFTQRGAVKRM 718 Bacillus subtilis s...
P47446   635 KDHLVSAFLQQD--DKLICLVSDHNYYTVFHTNEIPLISSKGMGVKGMKLKLEDQIKFVVAFEANePLVMICSDGSVINL 712 Mycoplasma genitali...
AAF30879 724 NISELKLSKRAATPTNLY-PITKKVQ 748 Ureaplasma parvum serovar 3 str. ATCC 700970
AAF85901 718 SIEEILATSRAKRGLQVLrELKNKPH 743 Streptococcus pneumoniae
Q45066   719 SLSEFEKTSRAKRGVVMLrELKKNPH 744 Bacillus subtilis subsp. subtilis str. 168
P47446   713 KQTELVVVSRMATAKKL--PVKKAIN 736 Mycoplasma genitalium G37
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