Conserved Protein Domain Family
Arginase-like_1

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cd09999: Arginase-like_1 
Arginase-like amidino hydrolase family
This family includes arginase, also known as arginase-like amidino hydrolase family, as well as arginase-like proteins and are found in bacteria, archaea and eykaryotes, but does not include metazoan arginases. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid.
Statistics
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PSSM-Id: 212523
Aligned: 72 rows
Threshold Bit Score: 121.966
Created: 28-Dec-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
active siteMn binding site
Feature 1:active site [active site]
Evidence:
  • Comment:Active site is composed of the metal binding (Mn), water and substrate binding (arginine) site.
  • Comment:Two Mn2+ ions are located in the active site. A The bridging water symmetrically positioned between them is responsible for hydrolytic attack on the guanidine group of the substrate.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                     
EHH67461    2 QLVLAPSNLGLsp--lQKGHVPGTWRAPEALmdaglgeavnySCLHSLSRpd----ysPEAQEGTRIRNGH-AIRAYDLI 74  Gluconobacter morb...
CAO97798    3 VKIICSQGRVGd---kTDATLRGAKLTADTLg----------RKFKRKISyigkfspcKNDQWKDSLPEAApTLALLQGE 69  Erwinia tasmaniens...
EFL06911    1 MEVIVSQGRIGd---rGAGMIEGAARTARALe----------ERYGAEPRyvg---tpAGPEDDDWPASLR-AAERTLSG 63  Streptomyces sp. AA4
BAI70376    2 IDLIVSQGRVAd---rAAWMIEGAARTARALeery---glkgHYVGEPAPh-------ADDDWSVALPQAReTLVAVREA 68  Streptomyces laven...
ABE58443    4 FDLILSQGRLAd---rKDGTIKGAKLTAQALa---------dEYSITPITcg----rpSAALNDNWKQSLS-AGSEVLNE 66  Chromohalobacter s...
Q6AG97      5 SFLVIPQWQGSgs-srAMRLIDGAEAVLGDLpvs------rtHVVTVPAA--------AGEALGTGVQRYS-SLTAIREL 68  Leifsonia xyli sub...
CAQ01566    4 SFVVVPQWQGSgs-srAMRLADGAEAIRGDLpas------atHVVEVPVE--------AGESLGTGVLRYA-SLLAVRTR 67  Clavibacter michig...
EAR25059    4 NYVVVPQWQGSgs-srAMRLVDGAESIRGDLpsa------atRTVEVPLE--------AGDQQGTGVHRLS-SLTLVRER 67  marine actinobacte...
BAJ73429    3 RFIVAPQWQGSss-srAMQLIDGAEAIAGDL-----------PRASTTVLdav---peAGDAQGTGVHRLS-ALMRMRER 66  Microbacterium tes...
ACU95984    2 RVHAVPQWQGAgwdgaPSRLPVGCEVLASLAe----------EVLGTPVSrvp--vdhEGSPVERGVVNRA-ALLGNRPA 68  Saccharomonospora ...
Feature 1                           #                        # # #                #           
EHH67461   75 LGETVGNVCts-geFALVIGGDCSLLLGALVGARQIGp---ISLIHIDGHSDFRHPGNydpaaaLNGAAGMDLALATGRG 150 Gluconobacter morb...
CAO97798   70 LQQCLEQDN-----TPILALNTCSASLATLPIAAAKYp--dMKLLWIDAHGDFNTPHTt----sTGYLGGMALAGACGLW 138 Erwinia tasmaniens...
EFL06911   64 LAQAVSASVaa-grRTVLAANTCSASLATLPAAVRAYp--dCAVLWIDAHGDFHTPDTt----eSGYLGGMALSGACGLW 136 Streptomyces sp. AA4
BAI70376   69 ATESIKGDN-----LTVLVNNTCSVSLATLPVVAREHp--dAVVLYIDGHGDFNTPETt----dTGYLGGMVLSGACGLW 137 Streptomyces laven...
ABE58443   67 IELAIESSLlk-ghHPCLIGNTCSSSFASLPLAVKYHp--tAKVIWIDAHGDFNTPETt----dSGYLGGMVLAGVCGLW 139 Chromohalobacter s...
Q6AG97     69 AAAEIEVLAa----PIVTVGGDCGADLASVQHAVSTRpggaLALVWFDAHGDLNDVATs----pSGAFHGMVLRALLGDG 140 Leifsonia xyli sub...
CAQ01566   68 QEAALRAASaagagPLVTIGGDCGVEIASIGHAAAAHp--gLAVVWLDAHADLNSPASs----pTGAFHGMVLRAAIGEG 141 Clavibacter michig...
EAR25059   68 THHVFAEDAa----IHITIGGDCGVELAAIEHVSASA----PAVVWIDAHPDLHTPDSs----pSGAFTGMVLRTLLGEG 135 marine actinobacte...
BAJ73429   67 IEDAVRAGDe----PAIVIGGDCGVALGSVSAVAGDD----LAVVWIDAHADLNTPASs----pSGAFHGMVLRAIAGEG 134 Microbacterium tes...
ACU95984   69 QLMVLENPEg----PVLTLGGDCASDLVPIGVARYRYgp-kLGVLWFDAHADANTPDTs----pSGAFHGMVLRALLGEG 139 Saccharomonospora ...
Feature 1                                                                                    #
EHH67461  151 EALLtawpdvsdplVSDANVIQIGERESHDPDfvwpdiantaiEQVDIFEAQKIgpSGLSQRIHDVLLrepeqSFWIHFD 230 Gluconobacter morb...
CAO97798  139 DSGYgh-------gIRPEQVILIGAHDIDEAEll-------slKQHSVRNIIPE--KVNPENVIKNIEg---sKVWIHID 199 Erwinia tasmaniens...
EFL06911  137 DSGQga-------gVDPSRVVLVGARDIDAPEre-------llDKAGVRILAPA--DVTGERVAAAVGg---aRVWVHID 197 Streptomyces sp. AA4
BAI70376  138 DSGHga-------gLRPEQAVLVGSRDIDEGEre-------liRKAGVRVIPPG--EATAQAVLDAVKd---aPVWIHID 198 Streptomyces laven...
ABE58443  140 ESGRkk-------gVNPESVIVAGVRDLDPEEer-------llHENKVTVLNPT--SFSVESVLEAVGe---sDVWIHID 200 Chromohalobacter s...
Q6AG97    141 PDGLastg---savLKPSSIVLAGTRALDEGEsa-------fvAKNGIRVVEPGd-FDDPDALVRAVGasgatAVYLHID 209 Leifsonia xyli sub...
CAQ01566  142 VDGLelp----agaVTADRVVLAGVRALDDAEsd-------lvDARGITLLGVD--AVGPEALVAAVSatgatDVYVHVD 208 Clavibacter michig...
EAR25059  136 PAALvpe-----hpLTADRVILAGVRSADPEEds-------yiQDAGIRSIGAI--EFSPEALLDAIAatgadSVYLHID 201 marine actinobacte...
BAJ73429  135 DDLHrle-----pgITPGRIVLAGTRALDAEEqr-------fiEHHGVRVIAPDd-LADPDVLAEAVVatgasRVYVHVD 201 Microbacterium tes...
ACU95984  140 DEDFvad-----paVEPGRAVLVGTRSFDPAEt----------EAVRAGVLRHVppPAEPADVVAAVResgaeRLYVHVD 204 Saccharomonospora ...
Feature 1      #                                          #                          
EHH67461  231 VDVMDQaIMPAVDCPGsPGLSPEYLVQILSPLVSsaGCLGMSLTIYDPdrd---pegQCATIIIDILHALP 298 Gluconobacter morbifer G707
CAO97798  200 WDVLDPgQINADYKVK-GGLPLSTLIDTLKAIPAs-QVLGLEIAEFSPdenrpeqneKDLINICDVVDALF 268 Erwinia tasmaniensis Et1/99
EFL06911  198 WDVLEPgTVPADYHVP-DGLLPAKIREILEAVPAa-DVLGLELAEFAAtgd----esTDARATESIVDMIA 262 Streptomyces sp. AA4
BAI70376  199 WDVLEPgSIPADYTVP-DGMLPAQIRAVFEAIPAe-RLIGVELAELNAp--------ADSERAEQAVAVIL 259 Streptomyces lavendulae sub...
ABE58443  201 WDVLEPgYIPADYSVT-GGLVPSQIECLLSSLSG--RILGLEVTEFCAet-----gcNHTAELNYIVKTLA 263 Chromohalobacter salexigens...
Q6AG97    210 LDVLDPaVVDGIGSPEpFGVTTEQLCDAIRALRArfELAGAAVTEFAPesae--aavRDLPVILRVLGALT 278 Leifsonia xyli subsp. xyli
CAQ01566  209 LDVLDPgAMSGVGHPEpFGLDVPAVTESIKAMRRsfGLAGAGITEFAPsspa--aavDDMGTILRIIGALT 277 Clavibacter michiganensis s...
EAR25059  202 LDVLDPaEFAGLGSPVpFGVSPTALAETIRAVVAkyPLAGAGITEFAPasia--qavDDLPTILRLIGAIT 270 marine actinobacterium PHSC...
BAJ73429  202 LDVLDPaEMTGVALPEpFGARTADVVASIRRLRErlPLAGATLTEFSPsspa--aavDDLGTILRLIGALA 270 Microbacterium testaceum St...
ACU95984  205 VDVLDPgEFSGTHYHEpGGLTVERLVACLDALAEf-DVVGAALTECTAqd------rTEAAALIPVVRALH 268 Saccharomonospora viridis D...

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