3CXJ


Conserved Protein Domain Family
T3SC_YbjN-like_2
?
cd17510: T3SC_YbjN-like_2 
Click on image for an interactive view with Cn3D
Uncharacterized protein is structurally similar to type III secretion system chaperones and YbjN family proteins
This family includes an uncharacterized protein from Methanothermobacter Thermautotrophicus that is structurally similar to type III secretion system (T3SS) chaperones (T3SC) that bind effector proteins, and is homologous to YbjN, a putative sensory transduction regulator protein found in Proteobacteria.
Links
?
Statistics
?
PSSM-Id: 409322
Aligned: 34 rows
Threshold Bit Score: 103.878
Created: 6-Jun-2017
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
 
putative
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:putative tetramer interface [polypeptide binding site]
Evidence:
  • Structure:3CXJ: two homodimers of uncharacterized protein from Methanothermobacter Thermautotrophicus form a tetramer; contacts at 4A.
Download Cn3D for Viewing 3D StructureScroll to Sequence Alignment Display
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Feature 1                                                                ##                      
3CXJ_A         4 SQEXIKKWLDEEGFlrx---evpDENARFHYVVNYp--eDHVIDIIQPAg----kDDXILIACATSVSPehqagiralsx 74  Methanothermoba...
WP_054845283   2 NDDKVRLLFEALNMktf---rptQAQEFFHLSVSPpq-gGPVVDVIRLKe----sSNFYIIAMGIQIAEdhlqklssmkp 73  Sulfolobus sp. ...
AAK42903       6 SDSEVFNWFKELGMrve---qvkSGDLYFHFTVAPpm-gGLPVSVIRPRp----dSTYYIVAVLLELDQer--------l 69  Sulfolobus solf...
AHC52128       3 SDSEVVEIFKELGMkvk---eekQQGLHFHVNISPptanSAIVSIIRPTa----fSKYYIVTMAIEVDPp---------- 65  Sulfolobus acid...
ACL10895      10 VQDLIVKWLMEESFttrkleappGAGIKWGINVTTpgnpGVNFTVVNPVd----kPDRYILALAIVVSPeharelekmkp 85  Desulfurococcus...
ADL19221       3 LKDDVARWLKDEEIdvdevpvpaGAPVEWALNATV----KAPLRVLLGVqkpktkADRLVISMVVKVADqhkaalssmap 78  Acidilobus sacc...
WP_054838614   3 LDQEITEWVKELGMkve----klEGNNFFQIKVTPpl-gGPSVAILRPKm-----EDTYYIFTIVVDIDv---------- 62  Sulfolobus meta...
BAA80700       7 LKNKILAWLADEFNvsvk-slpkNAPLDWAIKAETqa-pVKVALVIQKPr----gRDVVAVTIGIALSQkhrealsklgp 80  Aeropyrum perni...
WP_015232417   3 LKEEIIKWLKEENLevseipipkDAPIEWAINTMVnapfRVAISIQRPKg----kTEKFAFTMAVKVAEqhkekiikmpe 78  Caldisphaera la...
EZQ02015       2 NDEDVISLFKELGMkve----kvNGPMFFQVNISSla-gGPVVSVIRTSq----nANYYIITTILDLPP----------- 61  Candidatus Acid...

Feature 1               #  ##  ## ####                  ### #        #                     
3CXJ_A        75 eKRTEFIWKVRFTLNRFGVDFQLDhpe--nvLNSYLVTDEIFFDg---LSKDRLISSIKNVFRAKLQVXWXIQE 143 Methanothermobacter t...
WP_054845283  74 eERGEFLLNIQKEALLNGVDIATLplg-qqvPQVIQLTKAIFDV----ADENDFLETFVKVRNIGIFIMLSFTT 142 Sulfolobus sp. JCM 16833
AAK42903      70 rNNKRLVEQIKRELLRMNVEFFFTpnd--kePKSIQVARLMFTDg---LTKNEALNNVTLVKNSALLVLQLINE 138 Sulfolobus solfataric...
AHC52128      66 kLNKKVLREIGVELARLNVEFYVMpp---ekPTAIQIAKLLYQEd---LSKNELINTVTLVKNAGFIVFNILSG 133 Sulfolobus acidocalda...
ACL10895      86 aERLRVMNSILSKALTVCIDCKIMvqpnivtPQTITVNMEFFEDelrsYGKSFFLRLVWRFLNTYLAIVSGFNE 159 Desulfurococcus kamch...
ADL19221      79 kERAKLMSQLLVNVTSLCPSCIIVfqpqldlPDTIVVSKVIYDEn---IGPSAIGESVRVLVNEYALIVSFFNA 149 Acidilobus saccharovo...
WP_054838614  63 eTQLKVLRQIMLDLMRMNVEFFLTpq---gkPDKLHLARLVFADg---LTKNQMLENLTLVKNAAYLAITWLKN 130 Sulfolobus metallicus
BAA80700      81 gAREEFAVSLVRDLIALCPHCRVIaqpnprdLQTILISRELYSDs---LTRQSLIDASVTLVNMFLVTVLKLNQ 151 Aeropyrum pernix K1
WP_015232417  79 qERANMIGELLKNLYMMCPSCITIfqpdinnPDNIIVTKIIYQDk---ITPSEVTDSVRILSNAYGLIVTHFTI 149 Caldisphaera lagunensis
EZQ02015      62 -IDDKTMKQIGLELSKMNIEFFLTqen--enPRGLQLAKLRYAEg---LSKDQMLDSVTLVKNASYMVVNLLDL 129 Candidatus Acidianus ...

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap