3H38


Conserved Protein Domain Family
PcnB

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COG0617: PcnB 
tRNA nucleotidyltransferase/poly(A) polymerase [Translation, ribosomal structure and biogenesis]
tRNA nucleotidyltransferase/poly(A) polymerase is part of the Pathway/BioSystem: tRNA modification
Statistics
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PSSM-Id: 440382
Aligned: 755 rows
Threshold Bit Score: 203.507
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3H38_A        14 RVDPKILNLFRLLgkfgDEVNMPVYVVGGFVRDLL-LGIKNLDIDIVVEG--NALEFAEY-----AKrf--lP-GKL--- 79 
WP_114594717  64 TGHPALLDVIAAF----DAEDIPLHAVGGCVRDLIrTGTPGNDLDLTTPA--DTDTIRRL-----LDpl--gS--LT--- 125
WP_110173790   6 dslsLARAIAEQV----RACGGRALVVGGFVRDAL-LGHPSKDLDVEVFGl-PAAELKTL-----LGqw--gA-VNT--- 68 
WP_013134459  12 KLPNTLTKILKLL----QEKGAKPILVGGCVRDHF-LNLEIKDYDIEVFHieDFETLTKY-----LEqf--gK-VKL--- 75 
WP_011956665   8 ALLERLDPLFAAM----MRVGGHPLLVGGAVRDLL-LGLTPTDIDIEVYGv-DGQTLAAA-----LApf--gR-VNV--- 70 
WP_100277576  15 SLPARLMTLCNQI----AQTGGRGWLVGGSVRDML-LGHPPKDFDLEVYGi-EAKALETL-----LKtm--gR-TEA--- 77 
WP_096055673   2 QLPEPLLVALRAL----RTM-GSPRLVGGCVRDWL-LGLEPKDFDVEVPGv-TFEQLHRA-----LAsf--gS-TDV--- 63 
WP_095558681 102 RYKSIIDKISITA----VENSFDVYIVGGFVRDLF-IKREPKDLDIMVCG--RGSNLSMQsaginFSkilakKyKLDkpv 174
WP_077024731   1 ----MLSTIVNEI----VQSGGRAFEVGGCVRDYI-LSLPCKDLDIEVFDl-DADTLTAI-----LEkf--gR-VDQ--- 59 
WP_046297156   2 HLPAELLPVLAAL----QSV-GRPRLVGGCVRDWL-LGIAPTDFDLEVASa-SFDSLHRV-----LApl--gA-TDV--- 63 
3H38_A        80 VkHDKFMTAsLFLK-GGL-RIDIATARLEYYESPAKL-PD-VEMS---TIKKDLYRRDFTINAMAIKLnPkdfGLLIDFF 152
WP_114594717 126 LeGVSFGMV-RLCR-KGMpDVEITRYRTETYDDEGSRkPT-TRTAs--DLVEDLERRDFTVNAMAVDLmS---GDLVDPF 197
WP_110173790  69 V-GESFTVF-KVQ---G---LDVSLPRRESKVGRGHR-GFeVHGDpslPFAEAARRRDFTINAMGWDPlT---GEYLDPH 136
WP_013134459  76 V-GKSYGVL-KLSV-DKQ-EYDFALPRVEKKIAKGHK-GFeVISNsylSFKEAAIRRDFTINALGYDFiN---EEILDPF 147
WP_011956665  71 V-GRSFGVL-KMRL-DEY-EVDVALPSRRHPLPDEET-GAlPDYDpslTPREALARRDFTINALALTP-S---GDLIDYF 141
WP_100277576  78 V-GRQFGIL-KLWT-GGL-EIDVALPRTERKTASGHC-GFaIHTDpylSPEKACLRRDFSINAMMFDPlT---CSLLDFH 149
WP_096055673  64 V-GRSFGVI-KLRV-AET-EYDFSLPRRESKTGAGHR-GFaVEPEpnlTDAEAAARRDFTVNAIAYDPfA---ETVIDPH 135
WP_095558681 175 I-FERFGTS-KLFM-DSE-EVEFVMPRREYYNANSRN-PD-TQIA---SVEQDALRRDFTINALFLRLnD---MKILDFT 242
WP_077024731  60 V-GASFGVI-KLKAnDGT-EFDFTLPRRESKTGQGHR-GFqVDVDhtmTLAEAAARRDYTLNAIYRCAsN---GEILDPH 132
WP_046297156  64 V-GRSFGVI-KLRLrSGT-EYDISLPRRESKTGAGHR-GFaVAPDptlSEAEAAARRDFTLNAIAWDPaA---RHLIDPH 136
3H38_A       153 G-GYRDLKEGVIRV--LHT--LSFVDDPTRILRAIRFEQRFDFRIEETTERLLKQAV--EEgyLERTTGPRLRQELEKIL 225
WP_114594717 198 G-GAADLHAGVLRA--VGDptERFAEDPLRVIRAIRFSAQRGWRPDPDTRAAAKQTVadGR--LGIVSDERIVAEAQKIL 272
WP_110173790 137 G-GRDDLAQRVLRM--VDg--RTFGEDSLRVLRALQLASRFECSVDPGTRDVCRA----TP--LDDLAAERVWGEVEKLL 205
WP_013134459 148 G-GLEDLENKTLRH--IDd--NSFIEDPLRVYRAVQFASRFDFTLDEKSFDLCKKMVsnND--LEELANERIFEELKKLF 220
WP_011956665 142 G-GRADLEARVLRH--TS---EAFGDDPLRVLRAMQFAARFAMRLAPETAALCRTLL--SQ--AAGLPPDRIWREWQKWA 211
WP_100277576 150 N-GQRDLKAGILRH--VS---SAFAEDPLRPLRAVQFAARFKLTLEKDTADLCRSLL--AE--ADKLPPSRIWDEWKKWA 219
WP_096055673 136 N-GVHDLRARVLRH--TS---AAFTEDPLRVLRGFQLAARFNFTLAPETVALCRSIS--GT--FHELPVERIWGEWAKWA 205
WP_095558681 243 SqGVVDIKNKIIRVtdPSNieIIFKQDPLRILRAVRQSVQLDFKIETETYNAMKISS--PS--IEIVSPERIRDEINKIL 318
WP_077024731 133 G-GLADLNSKTLKA--TS---PHFAEDPLRVLRGMQFAARFDMSIDSHTASLARSLR--AE--YSTLARERVWAEWHKWA 202
WP_046297156 137 G-GEADLRARRLRH--VG---PAFVEDPLRVLRAMQLAARFDLTLDPATADLCRSIA--PT--FAELPVERIWHEWAKWA 206
3H38_A       226 E-EK----NPLKSIRRMA---QFDVIKHLfpktyytpsmdekm-------------------enlfrnipwveenfGEvd 278
WP_114594717 273 V-SP----HPAAMSRAIRgahSLGCLYRLfpgvsvmagmqqt--------------------------asgmdrcdepad 321
WP_110173790 206 LrAA----RPSIGLHLAR---DLDVVSRLwpalealagcpqdpewhpegdvw-thtcmvvdqaasrkegflypeqvSL-- 275
WP_013134459 221 LkST----KPSVGFELLK---ELGILKYypelkaligceqepeyhpegdvw---ihtlmcldemakiktndeykdlVL-- 288
WP_011956665 212 LlGV----FPSAGLRALD---ESGWLALypelaalqgcpqhpryhpegdvwthtlhvcdaavriadrdaldgherlTL-- 282
WP_100277576 220 L-SQ----HPSYGLSALA---ESGWLVRypelepmmgceqephwhpegdvwkhtlqvcdqaanlctrkelndetrmLL-- 289
WP_096055673 206 EkST----HPSRGLAVLE---ETGWLAHfpeiaalrgtqqdpewhpegdvfthtahccdalvcleawrnapadrrrQL-- 276
WP_095558681 319 I-EK----IPSKAFKIMD---EINLSVKIlpevarlknleqlekyht-----------ddvfvhtlkvldrtkndiIL-- 377
WP_077024731 203 TrGR----TPSCGLRLLE---STGWLELypelsalidvpqdpewhpegdvwthtqlvcdaaaaiadreeldefdrtVL-- 273
WP_046297156 207 EkSAtprgRPSAGLRVLA---ATGWLAHfpelaaldgcpqdpewhpegdvfthtghccdalardpewinsdprrrrLL-- 281
3H38_A       279 RFYAVLHvfle-----------------------fyddESWKEVRDRYSLR----RNLINE---IRHVEK----SA--P- 321
WP_114594717 322 RLAFMIklsg-------------------------pdpkAIGSILKRAKWP----HEQVDAavrIARLAKvadrYSpdVr 372
WP_110173790 276 MVGALLHdigkplvtavidg------rirspghegegvPLATGLLDAWQLHtldgYPVRAQ---VLGLVA----WH--M- 339
WP_013134459 289 FFAILCHdfgkplctkvidg------kitshkheslgiEPTVSFLEKLTND----KKLIAD---ILPLVK----YH--L- 348
WP_011956665 283 IVAALCHdlgkppttviddd-----giprsighseagvSLTQTFLVRIGAP----HWIERR---VTPLVR----EH--L- 343
WP_100277576 290 VLSSLCHdvgkpdtsfvndq-----gricspghaevgvDISRSFLKRIAAP----LRLTDM---ILPLVK----EH--I- 350
WP_096055673 277 LFAVLAHdfgkpsttsfadrrg--qlrwispghesaggPLAASFLTRIGAP----RELIAH---VRPLVV----LH--L- 340
WP_095558681 378 RMAALLHdtgkyatckkngg------ricfyghdaesaKEAEAVLKRLKYS----KEFIQK---TVSVIK----NH--M- 437
WP_077024731 274 IFSALCHdlgkatttkfvdg------rwrarghceagvPLTRRFLESIGCP----ESIIVV---VEPLVA----EH--L- 333
WP_046297156 282 MFAVLLHdvgkpavtrqetkagspalrwvspghepagvALSEAFLRSIGAP----HDHAPA---ITPLVA----NH--M- 347
3H38_A       322 ---ALLemls--ervP-ASFVYPLVKgvSNETICHFLAy------------lSGEK--EGL---------FKSYLLKI-- 370
WP_114594717 373 geeRIHghp----gsEpDiEARRLVRtysDAELDAAARiar---------adrSGL--HPS---------VAQARKDa-- 426
WP_110173790 340 ---LPGswskaaepvS-DGAFrRLARkvd---mvLLARlaesd-----cngrsGTFdcsf-------gqwFLDRVEAlgv 400
WP_013134459 349 ---SPFqlyl--hnsS-DKAVkRLALkv---diEMLCLvcladc---------lgrtiEDKckcheaiswLKNKASQlev 410
WP_011956665 344 ---AHLnv-----qpT-PRVVrRLAHrlaPATLQQWERlvead-----asgrpPc--pPDRpa-----aaFLAVAEAega 402
WP_100277576 351 ---THLhg-----epT-ERAVrRLADrltPANIELWEMlvead-----asgrhPa--pASRpa-----lgWLKLAEElkh 409
WP_096055673 341 ---AHHsgq---gdfS-DSRIrRLARklaPATIDELCIvmhad-----hdgrpPLHspETLari----aeLQSRATAlal 404
WP_095558681 438 ---YPKmys---ddwT-DGAVRRFVKr-CSGELDLIMEisradygkdsndvkLVKL--KKR---------IEDLKLKNm- 497
WP_077024731 334 ---AHAnp-----aqS-PKAVrRLSHrlgDATMVQLVHlvead-----mngrpPl--pRGLpds---vrqMMEIAGKlnv 394
WP_046297156 348 ---VHHhggp--dglG-PNAIrRLARrlaPATIDELALvmrad-----segrpPLHspETLali----drLRARATElal 412
3H38_A       371 -KNTKLEKINGEYLIRK-GITSGKIIGEVLEKILMKKLDGD-TRDEE---Ei--LEE--VLA-SL 424
WP_114594717 427 dVWRAPLPVNGHDAMTA-GLR-GPAIGTALRTCESLYLRGM-TTRED-------LLT--WLR--- 476
WP_110173790 401 eHAPPAPLLLGRHLIAL-GVAPGPRMGDILRDVYEQQLDGVvATVEDaq---vaARA--ILSgNA 459
WP_013134459 411 tNSGPKAIVMGKDLITL-GFTPGVLFKEILDYAFDLQLDEDlP--KDliiEk--IKEk-YIKg-- 467
WP_011956665 403 aMSRPAPLVRGRDLIAA-GVAPGPRLGALLRRAYEAQLDGVfSTAEEgv---twVLQtdEV---- 459
WP_100277576 410 qHNRPEPLLTGQMLLDL-GEKPGPGMGEIISKAYQAQLDGTiSDKHSavqwyndFRPw---Sq-- 468
WP_096055673 405 tSSAPRPILLGRHLIAL-GLSPGPDFKKTLDAAFEAQLDGAfSNETDal---vwLKN--HLpapp 463
WP_095558681 498 -LYPKPELLTGREMMRIfNRLSGKWIRKAKSKIEEMRFENPgITKEE---AieiIRE--MFR-K- 554
WP_077024731 395 qKSSPQPIILGRHLIAL-GHQPDVWFGDVLRACFEAQLDGDfESEAEgi---rfLKK--TLSnQ- 452
WP_046297156 413 gDAAPRAILQGRHLIAT-GLAPGPDFKALLAAAFEAQLDGAfVDEATal---iwLSK--NVpppp 471
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