Conserved Protein Domain Family
bZIP_ATF3

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cd14722: bZIP_ATF3 
Basic leucine zipper (bZIP) domain of Activating Transcription Factor-3 (ATF-3) and similar proteins: a DNA-binding and dimerization domain
ATF-3 is a Basic leucine zipper (bZIP) transcription factor that is induced by various stress signals such as cytokines, genetoxic agents, or physiological stresses. It is implicated in cancer and host defense against pathogens. It negatively regulates the transcription of pro-inflammatory cytokines and is critical in preventing acute inflammatory syndromes. Mice deficient with ATF3 display increased susceptibility to endotoxic shock induced death. ATF3 dimerizes with Jun and other ATF proteins; the heterodimers function either as activators or repressors depending on the promoter context. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.
Statistics
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PSSM-Id: 269870
Aligned: 8 rows
Threshold Bit Score: 82.125
Created: 3-Sep-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:
  • Comment:based on the binding of mammalian c-Fos to DNA
  • Citation:PMID 7816143

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #  ## ### ## ### ###                                         
1604249C     129 RKKRRRERNKIAAAKCRNKKKEKTECLQKESEKLESVNAELKAQCEELKNEKQHLIYMLNLH 190 human
NP_001087487  88 RKKRRRERNKVAAAKCRNKKKERTDSLQKESEKLESINADLKAQIEELKNEKQHLIYMLNLH 149 African clawed frog
EFX84861     185 RRRRRRERNKVAATKCRNRKKERTGILMQESDALEDQNVNFRSEIQRLEAEKRRLMDVLAMH 246 common water flea
NP_620473    207 RRRRRRERNKIAATKCRMKKRERTQNLIKESEVLDTQNVELKNQVRQLETERQKLVDMLKSH 268 fruit fly
XP_003216026  88 RKRRRRERNKIAAAKCRNKKKEKTDCLQKESEKLETINAELKAQIEELKNEKQHLIYMLNLH 149 green anole
NP_001002493  72 RKKRRREKNKVAAARCRNRKKERTDFLQKESERLEMLNSDLKSQIEELKSERQQLIVMLNLH 133 zebrafish
XP_002416098 110 KRSKRRERNKIAASKCRNRKKERTVRLSEESEDLQRGNAELRRELQRLRQEVQHLSHLLRVH 171 black-legged tick
BAE06318     146 KRERRRERNKVAAAKCRFKKKILSEQLQEESEHLENLNAKLKREIEKLQEERQKLMHLLNGH 207 Ciona intestinalis

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