2R9Y


Conserved Protein Domain Family
serpinF2_A2AP

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cd02053: serpinF2_A2AP 
serpin family F member 2, alpha2-antiplasmin inhibitor
Alpha2-antiplasmin inhibitor (A2AP/API, also called plasmin inhibitor/PLI or alpha-2-antiplasmin) is the primary inhibitor of plasmin, a proteinase that digests fibrin, the main component of blood clots. Alpha2AP forms an inactive 1:1 stoichiometric complex with plasmin. It also rapidly crosslinks to fibrin during blood clotting by activated coagulation factor XIII, and as a consequence fibrin becomes more resistant to fibrinolysis. Therefore alpha2AP is important in modulating the effectiveness and persistence of fibrin with respect to its susceptibility to digestion and removal by plasmin. This subgroup corresponds to clade F2 of the serpin superfamily. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants have been associated with blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.
Statistics
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PSSM-Id: 381009
Aligned: 18 rows
Threshold Bit Score: 593.872
Created: 9-Nov-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
reactive center
Conserved site includes 24 residues -Click on image for an interactive view with Cn3D
Feature 1:reactive center loop (RCL)
Evidence:
  • Comment:depending on the conformational state, the RC loop is surface accessible in the active form or buried and inserted as the central beta strand in the inactive form.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
2R9Y_A        14 TAEETRRLAQAMMAFTTDLFSLVAQTSTSSNLVLSPLSVALALSHLALGAqNQTLHSLHRVLHMNTGSCLPHLLSHFYQN 93  house mouse
AAA35543      72 TPEQTHRLARAMMAFTADLFSLVAQTSTCPNLILSPLSVALALSHLALGAqNHTLQRLQQVLHAGSGPCLPHLLSRLCQD 151 human
P28800        76 TPEQTRRLARAMMTFTTDLFSLVAQSSTRPNLILSPLSVALALSHLALGAqNQTLQRLKEVLHADSGPCLPHLLSRLCQD 155 cow
AAH81282     322 SQEEMRKFSQSITSFSIDLLKEIDPESKKPSVVMSPFSIALGLLQLSLGSgKEMEEKLMKTLHVESLHCLHNKLKTVRKE 401 African clawed ...
XP_006006155 166 TQEQMTMLGDAMTKFGLKLFQEVKLKREEPNVIVSPLSIALGLSQLALGAeNTTETLLLDTLHVRSLNCFHNVLKTVLKE 245 coelacanth
XP_007443536  92 LSPSVHKIAWAMRALGVDLLRELEAEQSKDNTLFSPLSLSLSLAHLALGAaNQTQKRLLEVLHMDSVPCLHQALRRVSRR 171 Burmese python
XP_007668099  99 SPKRMRKLAAAMMKFTADLFGDVLLKSDRPNVVLSPLSVALALSHLTLGAgNRTEKKLLEVLHTTSVPCLPDTLNRVRVE 178 platypus
KFP01834      48 TWKERQRLADGLMRFSIKLLREVQLESNRTNVILSPLSIALALSHVALGAaGQTEKHLLEVMHLESVPCLHQVLGTLRSK 127 Anna's hummingbird
XP_015277358 124 PPEKMHVIAEAMLKFTADLVREVELEKGQDNLFLSPLSITLALAHLALGAaNRTEKALLEALHLAEVPCLHQALHQVRQQ 203 Gekko japonicus
XP_018413153 173 SREEMRKFADAMMTFSKDLLKQVYLESTSPNVVVSPLSIALGLLHLTLGAeKETEKELLQTLHVESLPCLHEKLQKISKR 252 Nanorana parkeri
Feature 1                                                                                        
2R9Y_A        94 LgPGTIRLAARIYLQKGFPIKDDFLEQSERLFGAKPVKLtgkqeEDLANINQWVKEATegkiedflsELPDSTVLLLLNA 173 house mouse
AAA35543     152 LgPGAFRLAARMYLQKGFPIKEDFLEQSEQLFGAKPVSLtgkqeDDLANINQWVKEATegkiqeflsGLPEDTVLLLLNA 231 human
P28800       156 LgPGAFRLAARMYLQKGFPIKEDFLEQSEQLFGAKPMSLtgmkgEDLANINRWVKEATegkiedflsDLPDDTVLLLLNA 235 cow
AAH81282     402 LtKSILRTATRIYLKKGFKIKKSFLKRSEKWYGSKPLNLantkkQNLDSINKWVKDVTegqipqflsDLPQNVALILLNA 481 African clawed ...
XP_006006155 246 LtETATTAVTRIYMKKGFEAKNKFIKESEKFYGTKPATLggdqgDNMKAINKWVEEKTkgkikefllEIPDNLVLLLLNA 325 coelacanth
XP_007443536 172 LhETALSIAGRLYLEKGFPIKEKFLKESQRFYGVKPAVLsgnseADLAAINSWVEEATngqistmltELPPSVVMVLLNA 251 Burmese python
XP_007668099 179 LgRSVLKLAARMYLEKGFPIKEEFLEKSERFFGAKPYSLtgnneEDLRVINKWVKEVTsgkierflsDLPPRTVLLLLNA 258 platypus
KFP01834     128 LaESTLSLASRLYLQKGFEVKQKFLEDSEKFYGAKPMTLsgiseNDLVAINKWVKEATngqiptllqQLPENTVMLLLNA 207 Anna's hummingbird
XP_015277358 204 LdQAMLSVASRLYLQKGFEVKETFLEDSEKFYKAKPVTLsgngeEDLAAINSWVKAATrghipeilsELPVDVSMILLNA 283 Gekko japonicus
XP_018413153 253 LvQTALSIAARIYVQKGFQIKKSFLEKSEKLYRSKPVNLgpsmkENVKSINKWVSDATkgkitnfltSIPEEVVLILLNA 332 Nanorana parkeri
Feature 1                                                                                        
2R9Y_A       174 IHFHGFWRTKFDPSLTQKDFFHLDERfTVSVDMMHAVSYPLRWFLLEQPEIQVAHFPFKNNMSFVVVMPTYfewNVSEVL 253 house mouse
AAA35543     232 IHFQGFWRNKFDPSLTQRDSFHLDEQfTVPVEMMQARTYPLRWFLLEQPEIQVADFPFKNNMSFVVLVPTHfewNVSQVL 311 human
P28800       236 IHFQGFWRSKFDPNLTQRGAFHLDEQfTVPVDMMQALTYPLHWFLLEQPEIQVAHFPFKNNMSFVVLMPTRfewNASQVL 315 cow
AAH81282     482 MHFKGIWKNTFDPSLTSEDTFYINDDdGIQVEMMNAPKYPFSWLHLEAIEGHVAKLQFKGNMSFVILMPFSstwDLSKLL 561 African clawed ...
XP_006006155 326 IHFKGLWKIKFDPSQTKLDTFYINNEtYINTDMMTSSTLPLSIITDENWLAQVGRFSFKGNISLIVIVPYNr-kLNASIF 404 coelacanth
XP_007443536 252 VYFQGFWKTKFDPLLTEPSMFHLDDEfAVSVEMMKEQEYPLSWFSMEPLNGQVAKFPFKGNTTFVAIIPSHherNFSQFL 331 Burmese python
XP_007668099 259 VHFQGFWRTKFDPTLTKTDVFHLDEQfTVPVQMMKAQRLPLSWLSFDELEVQVARIPFKSNVSFVVVIPNKfewNISQVL 338 platypus
KFP01834     208 VHFHGFWRNKFDASFTGPDVFHLDNEfVVPVEMMKAQQYSLSWFTLESQDIQVAKFPFKNNMSFVVIVPNQytwNTSHVL 287 Anna's hummingbird
XP_015277358 284 VHFQGFWRTKFDPELTEPGAFHLDDEfVVSVEMMKAPKYSLSWYSPDSLDVQIARFPFKGNMSLVAIVPNHaerNISRLL 363 Gekko japonicus
XP_018413153 333 IHFKGIWKNKFDPSQTSEDTFFVNDEeSKLVDMMHAALYPLSYHMVEKLDSQVARLPFKGNMSFVIVMPYQtewNVSNIL 412 Nanorana parkeri
Feature 1                                                                                   #####
2R9Y_A       254 ANLTWDTLYHPSLQERPTKVWLPKLHLQQQLDLVATLSQLGLQELFQGPDLRGISEQNLVVSSVQHQSTMELSEAGVEAA 333 house mouse
AAA35543     312 ANLSWDTLHPPLVWERPTKVRLPKLYLKHQMDLVATLSQLGLQELFQAPDLRGISEQSLVVSGVQHQSTLELSEVGVEAA 391 human
P28800       316 ANLTWDILHQPSLSERPTKVQLPKLHLKYQLDLVATLSQLGLQELFQAPDLRGISDERLVVSSVQHQSALELSEAGVQAA 395 cow
AAH81282     562 ANFNQTDLYSRFSKEKVSNLKMPKLNLDYKLELNEALTNLGLGQLFTNPDLSGISDEPLFVSSIQHQSCLELNEEGVEAS 641 African clawed ...
XP_006006155 405 QDLNVTDLYNKLPKEKPIFVKLPKFKLDFSLELSKVLSALGLEELFKNPNFGKITDEPIFVSNVQHKSTLELQEDGAEAA 484 coelacanth
XP_007443536 332 SEVLQVNLETSFPEERSTMVKMPKLHLQDHTDLNQALIRLGLGELFSSPDLRPIAEGPLLVSSVQHQATLDLAEAGVQAS 411 Burmese python
XP_007668099 339 VNLSQAILHQSFPRERPTDVKVPKLHLDHQLDLSATLSHLGLQELFQGPDLSKISEQNLVVTSIQHQATLELNEEGVEAS 418 platypus
KFP01834     288 ENFPYQQLCRLFPKEVPTTVKIPKMKLDYELELNNVFSQMGLQELFTNPNLQKITDGPLFVSSIQHQSTLELKEDGVEAS 367 Anna's hummingbird
XP_015277358 364 SQLRPASLLSHFPKEMPTMVKMPKVHLESHLELNQAISQLGLGELFSSPDLRRIAEGPLFVSSIQHRSALDLVEDGVEAA 443 Gekko japonicus
XP_018413153 413 DKLNKSELYSRFHKQKPTTLKVPKLNLNFKLELTRALSNLGLGKLFTDPDLGRISNEDLVVSSVEHQATLDLNEDGVEAA 492 Nanorana parkeri
Feature 1        ######### ##########                        
2R9Y_A       334 AATSVAMNRmSLSSFTVNRPFLFFIMEDTIGVPLFVGSVRNPNP 377 house mouse
AAA35543     392 AATSIAMSRmSLSSFSVNRPFLFFIFEDTTGLPLFVGSVRNPNP 435 human
P28800       396 AATSTAMSRmSLSSFIVNRPFLFFILEDSTSLPLFVGSVRNPNP 439 cow
AAH81282     642 AATAVITSR-SHSIYRIDRPFIFFLFEDTMGLPLFMGQVRDPSS 684 African clawed frog
XP_006006155 485 AATSITMSR-SFVGFHVNSPFFFLLMDDNSGVPLFLGSVTNPNP 527 coelacanth
XP_007443536 412 AATSVVAYR-SFSAFCLDQPFIFMILEKTTGVPLFFGSIRNPNP 454 Burmese python
XP_007668099 419 AATSISMSRmSAASFRVNRPFLFFIFEDTAGLPLFVGSVKNPNP 462 platypus
KFP01834     368 AATSIAISR-SISAFSLDRPFVFIIFEDETGIPLFIGRVQNPNP 410 Anna's hummingbird
XP_015277358 444 AATSVVMSR-SLSTFVIDRPFIFFILDDTAGVPLFFGSIQNPKP 486 Gekko japonicus
XP_018413153 493 GATAILTSR-SLSTFSVNRPFFFFLIDDNTGVVLFCGYVRDPKP 535 Nanorana parkeri

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