Conserved Protein Domain Family
STKc_CDKL5

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cd07848: STKc_CDKL5 
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270838
Aligned: 5 rows
Threshold Bit Score: 579.259
Created: 24-Sep-2008
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:active site [active site]
Evidence:
  • Comment:includes ATP binding and substrate binding sites
  • Comment:based on the structures of human CDK2 and DYRK1A bound with ATP or inhibitor and substrate peptides, and on the structures of other CMGC kinases, bound with ATP or ATP analogs
  • Citation:PMID 9739089

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                 #####   #            # #                                             #  
O76039         11 NKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSE-----------------------------ENEEVKETTLREL 61   human
AAI59156       11 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE-----------------------------ENEEVKETTLREL 61   western clawe...
XP_425571      11 NKFEILGVVGEGAYGVVLKCRHKETHEIVAIKKFKDSE-----------------------------ENEEVKETTLREL 61   chicken
NP_001124243   11 NKFEVLGIVGEGAYGVVLKCRHKETKELVAIKKFKDSE-----------------------------ENEEVKETTLREL 61   zebrafish
CAF99817        8 NKFEVLGIVGEGAYGVVLKCRHKETNELVAIKKFKDSEgewrneegkrrwsdrkkggdnsiipvsftENEEVKETTLREL 87   Tetraodon nig...
Feature 1                    #               ####  # ##                                    # # ## 
O76039         62 KMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENL 141  human
AAI59156       62 KMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVTNYIYQLIKAIHWCHKNDIVHRDIKPENL 141  western clawe...
XP_425571      62 KMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENL 141  chicken
NP_001124243   62 KMLRTLKQDNIVELKEAFRRRGKLYLVFEYVEKNMLELLEELPNGALPDKVRSYIFQLIKAIHWCHKNEIVHRDIKPENL 141  zebrafish
CAF99817       88 KMLRTLKQDNIVELKEAFRRRGKLYLVFEYVERNMLELLEEHPTGAPPDKVRSYIYQLIKAINWCHKNEIVHRDIKPENL 167  Tetraodon nig...
Feature 1         #          #  #            # #### #                                    #        
O76039        142 LISHNDVLKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLLGAPYGKSVDMWSVGCILGELSDGQPLFPGEsEIDQLF 221  human
AAI59156      142 LISYNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGEsEIDQLF 221  western clawe...
XP_425571     142 LISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGEsEIDQLF 221  chicken
NP_001124243  142 LISANDILKLCDFGFARNLSEGSDANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGEsEIDQLF 221  zebrafish
CAF99817      168 LISSDDILKLCDFGFARNLSEGTDANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGEsEIDQLF 247  Tetraodon nig...
Feature 1                                                                                     
O76039        222 TIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTF 297  human
AAI59156      222 TIQKVLGPLPAEQMKLFYSNPRFHGMRFPAVNHPQSLERRYLGIISSVLLDLMKNLLKLNPSDRFLTEQSLNHPAF 297  western clawed frog
XP_425571     222 TIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLDPADRYLTEQCLNHPSF 297  chicken
NP_001124243  222 TIQKVLGPLPPEQMKLFYSNPRFAGLRFPSVSHPQTLDRRYLGIINGLMLDLMKNLLCLNPTERFLTEQCLNHPVF 297  zebrafish
CAF99817      248 TIQKVLGPLPAEQMKLFYNNPRFHGIRFPSVTHPQTLERRYQGILSGLMLDLMKNLLLLNPTERYLTEQSLNHPAF 323  Tetraodon nigrovi...

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