Conserved Protein Domain Family
guided_IscB

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NF040563: guided_IscB 
RNA-guided endonuclease IscB
Statistics
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PSSM-Id: 468538
Aligned: 73 rows
Threshold Bit Score: -1
Created: 24-Apr-2023
Updated: 4-May-2023
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_005316048  15 VFVLARDGVPLMPCHPARARELLRRSRAVVVRLAPFTIRLKDRGRGESEvagvqlrIDPGSKATGIAVTDTkaerlvggs 94  Streptomyces pr...
WP_013194611   3 VFVISKNKKPLMPTRPAKARRLLKSGKAKVVRRTPFTIKLLYET-TEYTqpv-vagMDSGSKHIGCAAVVN--------- 71  Methanohalobium...
WP_007919374   4 VYVLSSERTPLMPCQPAIARLLLKQGKAKVRHRTPFTIQLLAQPEHVYTqll-thgVDTGSSIIGSAVANEh-------- 74  Ktedonobacter r...
WP_018703575   4 VYVLDHNRKPLMPTTPAKARILLRQGKAKVIRKLPFTIKLLQESTTTYTqpl-thgIDTGSKTIGSAVIRPk-------- 74  Anaeromusa acid...
WP_016250486   2 VYVLSINNEPLMPCSNVIARLLLKQGKAKVKYREPFTIKLTYET-TTYTqpl-tlgVDTGSQTFATAVTNGk-------- 71  Enterococcus ce...
WP_009300958   2 VYVISKDGNPLMSCCNVIARLLLKQGKAQVKKREPFTIKLNYET-TNYLqnl-tlgVDTGSRTIGTAVSNDn-------- 71  Thomasclavelia ...
WP_015569729   3 VFVLNMRGEPLMPCSQRKARLLLKSNKAIIYKYNPFTIQLAYAT-GEAKqgc-rigVDTGSKHIGLAVTSE--------- 71  [Eubacterium] r...
WP_003351677   3 VFVQNKHGEALMPCKPRKARLLLKAKKAVIVSYKPFTIKLLYGS-SGYKqav-nvgVDLGTKHTGIAITSQ--------- 71  Bacillus methan...
WP_003706674   5 VFVINQHGKALMPCKPRKARILLRDGKAKVLKKEPFTIQLLYGS-SGYKqdv-nigIDSGQRHVGLAVTSQ--------- 73  Ligilactobacill...
WP_003611449   9 VFLLNKDGKPLMPCRPRKARLLLTSGKAFVVKKYPFTIQLKYGS-YGYKqkv-slgVDTGQRHIGFAIVSQ--------- 77  Lactobacillus d...
WP_005316048  95 tatvRRGLVSVELLHRgEQ---IRRAMAQRAGYRRRRRSANCRYRAPRNRNRar---saGWLAPSLRHRVESVASVTDRL 168 Streptomyces pr...
WP_013194611  72 ----DEVLYQSEVELRdD----VSRKMKDRADYRRNRRSRKTRYRKPRFDNRgns-kkeNRIAPSIKNKVQSHDRERRFV 142 Methanohalobium...
WP_007919374  75 ----GHVVYLSEVEIRnD----IANTMKERARARRNRRQRKTRYRPARWLNRkks-iktGRFSPTMRSKIDTHLREIRFI 145 Ktedonobacter r...
WP_018703575  75 ----GNVLYLSEIEIRnD----IAGKMKDRSKYRRNRRNRKTRYRQARWRNRkns-iktNRFSPTMTSKINSHIKEINFV 145 Anaeromusa acid...
WP_016250486  72 ----GNILYTSEVVLReDKnhsIKKKMDQRRMYRRNRRNRKTRYRKARFNNRkns-krkNRFSPTMTSKLHSHQKEIEFI 146 Enterococcus ce...
WP_009300958  72 ----GDILYMSEVVVRnD----ITEKMTQRAKYRRNRRNRKTRYRKARWLNRans-iknDRFSPTMRSKLYSHVKEIECI 142 Thomasclavelia ...
WP_015569729  72 ----DKVMWKAEVELRqD----VKSKIDKRRMYRGNRRYRKTRYRKPRFLNRkr---epKWLPPSLQNRVNHTFHWIDVL 140 [Eubacterium] r...
WP_003351677  72 ----NNVLTKGEIELRqD----VKSLLNTRRIYRRSRRNRKTRYRKPRFQNRkr---peGWLPPSIRSRVDNTFFWIDKF 140 Bacillus methan...
WP_003706674  74 ----DKVLFQGEVELRqD----VKLLLDTRRIYRRSRRNRKTRYRKARFLNRvsn-rkdNWLPPSVASKVNHNINWIKRL 144 Ligilactobacill...
WP_003611449  78 ----NKVLHQSEVELRqD----VHKNLYTRKIYRRSKRNRKTRYRQARFLNRvhgkrdgLWLPPSIKGKVSHNIAWIKRY 149 Lactobacillus d...
WP_005316048 169 RRLAPVTEIHVEHAAFDTHAMSEGRgLE----AIEYRRGALAGTE-IRELLLVRWQRSCAYCG---ASGVPLNAEHIRPR 240 Streptomyces pr...
WP_013194611 143 ESILPVKKWIVETASFDIHKITNPNvSG-----TGYQNGDLKGYYnIRTYVLHRDNYTCQKCKn-rSKDPKLECHHIVFR 216 Methanohalobium...
WP_007919374 146 RSLLPITSTILETGSFDPHALRNPEvLQk---KWLYQRGINYGFAnTKAYVLTRDGYLCQQCKg-kSKDRRLEVHHIIFR 221 Ktedonobacter r...
WP_018703575 146 KSILPITKTILETATFDPHALKNPEvLTn---KLLYQQGINYGFAnTKAYVLTRDQYTCQHCKg-kSKDHRLEVHHILYR 221 Anaeromusa acid...
WP_016250486 147 KSILPIAKLILETGTFDPHLMKNPSlANlkvkPWGYQQGPNYGFEnMKARILARDNHTCQICKk-kPKNERLEVHHIIFR 225 Enterococcus ce...
WP_009300958 143 KSILPITQMVFETGQFDTHLMKNPSlANprirRWGYQKGPNYGYEnTKAMVLNRDNYTCQCCKg-kHKDSKLEIHHIVFR 221 Thomasclavelia ...
WP_015569729 141 SSLVPNPNLHIEVGKFDTAKMINPEiNG-----VDYQHGQTYGFYdERYFVFARDNYTCQCCGkskDK--ILNTHHIIYR 213 [Eubacterium] r...
WP_003351677 141 CSLVPNPNLTIEVGKFDPHKMINLDiQG-----VDYQKGQTYGYYdVRYFVFARDQYTCQVCKk-kNK--ILKTHHIVYR 212 Bacillus methan...
WP_003706674 145 LSVLPKADLHIEVGKFDMQKMKNPAiNG-----EGYQQGDLYGYQtVKQFVLARDDYTCQVCKk-kGG--KLKIHHIIYR 216 Ligilactobacill...
WP_003611449 150 LAVLPNPDLHIEVGKFDMAKMVNPEiSG-----KQYQEGSLKDWKnYEYYVLARDEYTCQLCHk-hGEGVKLVVHHIVYR 223 Lactobacillus d...
WP_005316048 241 SRGGSSRLSNLTLACVPCNKAKGATPVEEFlagspeRLERILRdvgvpLHDAAAMNATRGRLISALEHLGppVHTWTGAR 320 Streptomyces pr...
WP_013194611 217 SNGGTDRPDNLITLCETCHGKLHDGe---------fTIN---K-----KPSNTKHPTEMGIVRSQIRKLNwkFQETFGYI 279 Methanohalobium...
WP_007919374 222 SRNGSDEEANLLTLCKTCHDGLHAGt---------iTLKLTGK-----KKGTLQHATQMNSIRTQLLKRVe-AEETWGFV 286 Ktedonobacter r...
WP_018703575 222 SEGGSDDQENLITLCKPCHDKVHSNe---------iTLKLKGK-----KKGQLSHATQMNTIRVQLLKQLptVQETFGFI 287 Anaeromusa acid...
WP_016250486 226 SQGGSDEENNLVTVCHSCHVELHKGl---------iHPNFEGS-----LKNALKYATQMNSIRVQLLKLYpdAIETFGYV 291 Enterococcus ce...
WP_009300958 222 SKGGSDEASNLITLCHTCHKDLHSGk---------iNPKLKGR-----IKGNLKFATQMNTIRKQLFRLYpnAIETFGYI 287 Thomasclavelia ...
WP_015569729 214 SNGGTNRVDNLITICTDCHTSQNHKKGGILy----kWQEQHKK-----VTQ-YKESPFMNTLRRRIFTAYpdAKITYGSE 283 [Eubacterium] r...
WP_003351677 213 SYGGTDRADNFITVCTDCHTHENHQKGAIFw----kWMNEGKK-----LLR-YKEGTFMNIFRKRVFTKYpqAEITYGSI 282 Bacillus methan...
WP_003706674 217 SLGGTNTIDNLITVCADCHTAKNHQSG-ILa----kWCKDKKK-----VNKSYKGATFMNILRRRLFNAFpqAKFQYGAC 286 Ligilactobacill...
WP_003611449 224 SQGGTDRVDNLITLCTNCHTTKNHQPGGKLy----kWMKAKKK-----VIKQLKGATFMNILRKRIMTAFpeASFQYGSQ 294 Lactobacillus d...
WP_005316048 321 TKWNREAMG-LGKTHTLD-ALSVG 342 Streptomyces pristinaespiralis
WP_013194611 280 TKYKREQKLnLEKTHYNDaVAICC 303 Methanohalobium evestigatum
WP_007919374 287 TKEHR-LLVgLPKEHIFDaAVIAT 309 Ktedonobacter racemifer
WP_018703575 288 TKEHR-QQHtNEKKHYIDaIFIAT 310 Anaeromusa acidaminophila
WP_016250486 292 TKANR-LNLgLPKEHYVDaAVIAT 314 Enterococcus cecorum
WP_009300958 288 TKANR-LQLgVNKEHYYDaCTIAT 310 Thomasclavelia ramosa
WP_015569729 284 TTPKR-KDMgLNKTHYNDaIIISG 306 [Eubacterium] rectale
WP_003351677 283 TTPRR-KELgLEKSHANDaIAISG 305 Bacillus methanolicus
WP_003706674 287 TTLQR-ADLnLTKSHYNDaVAISG 309 Ligilactobacillus salivarius
WP_003611449 295 TYVDR-KNLlLPKGHFMDaIAISG 317 Lactobacillus delbrueckii
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