Conserved Protein Domain Family
DUF1289
?
pfam06945: DUF1289 
Protein of unknown function (DUF1289)
This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N-terminus. The function of this family is unknown. Structural modelling suggests this domain may bind nucleic acids.
Links
?
Statistics
?
PSSM-Id: 462046
Aligned: 175 rows
Threshold Bit Score: 35.6126
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
jgi:HIMB59_00010630   6 SPCISVCKTDpETGYCYGCGRTNEEKSIWKeeNTSSDWK-HENLEIIKCRL 55 
WP_014109640         14 SPCIGVCQSG-PRGYCKGCFRSREERLHWL--DIDDQTK-RIIVKACSRRK 60  Glaciecola nitratireducens
WP_007641863         11 SPCIGVCQSG-PKGFCVGCFRSREERVHWI--NLEQDVQ-SKIIKACATRK 57  Paraglaciecola psychrophila
WP_013950514          5 SPCIDVCKFK-HAGHCIGCGMTKKQRKKFK--RLDGRKAkLAFIEALRLRq 52  unclassified Hyphomicrobium
Q88GU1                7 NPCVSLCQLN--SELCVSCGRTRDEIRKWR--GMKRPEK-MATVQRAATRM 52  Pseudomonas putida KT2440
Q883A4                7 NPCISVCQLS--GDLCVSCGRTKDDIRKWK--RMKRPEK-MAAVQRAAQRM 52  Pseudomonas syringae pv. tomato
Q885L7               43 NPCISLCKFD--DDICLGCGRSKREIKAWK--KLDKDDK-RTVLDESAKRL 88  Pseudomonas syringae pv. tomato
jgi:Pmen_1840         4 NPCIKVCEFE--RDICLGCGRSRQEIKGWK--RLSKSER-LMLLAEADMRL 49 
WP_014242487          8 NPCTKLCRYD-AADRCMGCFRTRAEVRHWK--RLPDETK-AAINARIAARG 54  Azospirillum
jgi:Turpa_4138       19 SPCIAVCKLDdAGRICIGCYRTVDEITTWP--QLDRQGK-YAVIENARRRR 66
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap