Conserved Protein Domain Family
TF_pcaQ

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TIGR02424: TF_pcaQ 
pca operon transcription factor PcaQ
Members of this family are LysR-family transcription factors associated with operons for catabolism of protocatechuate. Members occur only in Proteobacteria. [Energy metabolism, Other, Regulatory functions, DNA interactions]
Statistics
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PSSM-Id: 274127
Aligned: 7 rows
Threshold Bit Score: 399.859
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAE17503       5 RRLKLRHLEAFVEVSRQNSVSRAAEVLHLTQPAVTRTIRELEEICGQPLIEKDGRGIRITHYGEVFLRHAGTSLAAARNG 84  bacterium SB2
AAR21627       9 TRIKFRHIQSFVEIVRQKSLKRASEQLFVTQPAISKTLRELEEILGHPLLTRNRAGIALTPQGEVFLHFAEMSLAALRQG 88  marine alpha pr...
AAF65830       8 TQVKLRHLEAFSAIARLGSLKAACAALHLSPPALSKTLKELEEGLGTTLMTRDRGGTRLTPQGALFLDFTNQSLAALHRG 87  Sagittula stell...
AAR21648       5 SSLKLRHLEVFVEVARKMSVTQAAEALGMTQPAVTRALRELEAVCGKPLVEKHGRGIRLSSYGELFRDHAGRSLALARDG 84  marine alpha pr...
P52668         4 QRIKFRHLQTFVEVARQKSVIRAAEILHVSQPAVTKTIRELEDVLGVSLLEREGRGIRISRYGEVFLRHAGATMTALRQA 83  Agrobacterium t...
AAO55849       5 TRIKFRHLVCFLEVARQGSLARASDALAISQPALSKSLKELETLLATTLFVRSKSGAALTDAGVAFMRFAGPSVQALRDG 84  Pseudomonas syr...
WP_009934393   8 GRVKFRHLQCFLAVAQFGSVQKAAHSLSITQPAVSKTIAELESILGVRLFERGRQGARPTREGQLFMPHASACVLALRQG 87  Burkholderia ps...
CAE17503      85 PNALTQLNYSDGPMVRIGALPTVAASLIPQAVKAFLDTGLRNRLHIVTGENHVLLDQLRNGELDLVMGRLPAPENMQGLM 164 bacterium SB2
AAR21627      89 IAGVEELGRQGSTSFTVGSLPSVAARLMPLVTEEFLERAPDVTLRIIDGPHGYLIDLLRRGHIDLVIGRLGAPDTMQNIS 168 marine alpha pr...
AAF65830      88 IAGVSDLRDGGRETLRVGALPSVAARLMPEAVARFRRAAPDTQLMLRDGSHGVLTDALKSGALDMIVGRMGAAEAMQGLS 167 Sagittula stell...
AAR21648      85 VALLQGLGEAEGPQVSIGALPTVAADLVPDTLAQLHAGRAPGRFVVMSGGNQYLIDQLRRGSLDVVVGRLPAPETMAGVE 164 marine alpha pr...
P52668        84 VDSVSQEAARAGPPVRVGALPTVSVRIMPKAMSGFLAEKTGSPVKIVTGENAVLLEQLRVGDLDLVVGRLAAPQKMAGFS 163 Agrobacterium t...
AAO55849      85 VSSLRS-GEHETVTARLGVLSTAESLLVPEVVKRLHTRHPALIVSVMTGPSAYLLSQLRVGELDLVVGRMTDSPQIQGLT 163 Pseudomonas syr...
WP_009934393  88 VGLLAREGGGAAATLEIGMLPTVAASLAPAVLKTLAAEWPRAVVRITTVANAELLERLKAGAIECAIGRLSEPERMVGLS 167 Burkholderia ps...
CAE17503     165 FEPHYRERVVFAVDKNHPLAGKPqiSVNELDAYPVLIPSAASIIRPFVDRLFIEHGIPEPEQAIETVSDSFGRAFTQEYN 244 bacterium SB2
AAR21627     169 FTQLYNEHLDFVVRPGHPLLAQP--DIRRIADWPVIFPPEGAAIRALAERVLIAHGVGALPRRLETVSGAFGRRYVPNSD 246 marine alpha pr...
AAF65830     168 FTQLYLEPVVCVARAGHPLTKAPv-SVDALADCCILYPPEDAAIRPLLDRWCLAQGLAPFPERIDCVSGAFGRNYLRVSD 246 Sagittula stell...
AAR21648     165 FDPLYRERVAVVVAAGHPLAGAAhlPSAVFEDYPVLMPSEGSIIRPLVERMFLEQGLSLPRFPVETVSSSFGRRFVLAHQ 244 marine alpha pr...
P52668       164 FEHLYSEKVRFVVRAGHPLLSPGlsVFDHLHEYPVLMPTRQSVIGPVVEQFLIANGVPALPIRIETVSDAFGRAFLRTSD 243 Agrobacterium t...
AAO55849     164 FEHLYHESMTLVVRNDHPLLAAPl-KRESLEQFPLVLPLAGTTIRKFADSLFVQCGIQMPRQRLETLSLTLSRRYVQCSN 242 Pseudomonas syr...
WP_009934393 168 FEHLYNEPLVAVVRAGHPLAASAs-PAAQLARYPVVLPPYGTMIRQAAEQLLSACGAPPLESFVEVLSVSVARALALEND 246 Burkholderia ps...
CAE17503     245 AIWIISRGVIAREIESGQFVELPIDTRATVGSVGLNMRAGETLDTAAQCFAEILMGLSEQ 304 bacterium SB2
AAR21627     247 AVWIISAGVVAKEIADGQLARLPFDTAISNGPVGLMARPDETAPPAAQIFRLAVASAVEQ 306 marine alpha proteobacterium SE45
AAF65830     247 ALWFISEGVIAQDLADGRLVSLDFDLRLTAGPVGLMTRPDTVTSRSRQLFEKALRHAVHD 306 Sagittula stellata E-37
AAR21648     245 AVWIISHGVVRPDLQAGTMTALPVNTDSTLGPVGLCTRREHRLSAAAQRFCAALRSHCAA 304 marine alpha proteobacterium Y4I
P52668       244 AIWIISEGVVAADVADGILAILPVETGDTSGPVGLTVRADTQPSLPLSLLMQAIREAAGE 303 Agrobacterium tumefaciens str. C58
AAO55849     243 AIWIAPLDAVLLELKGGTLVELDMGIREPGGSVGLCSNPALPLTRAAQWCVDELRTVGAA 302 Pseudomonas syringae pv. tomato str...
WP_009934393 247 AVWFVPRYAAEFDLAAGTLTRLALPVDGADEPVGLILRTDAQPSPVARALIDAVRAIARR 306 Burkholderia pseudomallei
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