Conserved Protein Domain Family
DiSB-ORF2_chro
?
pfam16506: DiSB-ORF2_chro (this model, PSSM-Id:406817 is obsolete and has been replaced by 465149)
Putative virion glycoprotein of insect viruses
DiSB-ORF2_chro corresponds to a short conserved region at the N-terminus of putative glycoproteins from chroparaviruses. It carries two putative disulfide bridges. No similarity can be found with any other glycoproteins outside this region.
Links
?
Statistics
?
PSSM-Id: 406817
Aligned: 22 rows
Threshold Bit Score: 43.3871
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
APG77855     142 CMsAIDRHE-FEITGCK--LaSQCSYIQAHHF------FNTTICYGRrgdnvkymalapykipyvplt------------ 200 Xinzhou nematod...
APG77752     319 CV-LLDTEKlWQSPDCFdqI-LSCQNPTLLTLehhwygSSVTLCLAL--------------------------------- 363 Hubei hepe-like...
YP_009315902  85 CIkFIETHS-LIPDDCQsiLgDECEGATFKSIetkwhgLQLGICHPTpnctfqdfdqsyqcgnakyvlyheytfdipyvv 163 Lodeiro virus
YP_009337716 111 CLdALSENL-IQDYDCE--LdYSCEPHIRIKVahtwygSAVYACLGLnrt------------------------------ 157 Hubei virga-lik...
YP_009345039 148 CMsAYNKSF-NEDIDCR--LsSLCFGVIKKNV------DGLFICSGYsknlfrhyrlakstlladvf------------- 205 Xingshan nemato...
YP_009344995  82 CIsVVKTNA-LLEVDCQ--LpSRCGTLHHKLLsktfygQEVRVCYSFhhsvyadainlyt-------------------- 138 Wuhan insect vi...
APG77767      62 CIsVVKTNT-LLEVDCQ--LpQHCGVLHHRKMpqgwfgQEVILCYSFhqttlggalkvs--------------------- 117 Wuhan house cen...
ASA47335      64 CLsVYRTND-WFYSQCA--LpSNCSEPSVIKLersffgQETVICHSDlkhsrkdvyefftpk------------------ 122 Culex negev-lik...
APG76534     289 CLtLLETNT-LAHSDCP--LsRSCSNVAYHQLdvkwygKESGLCTGTllphvt--------------------------- 338 Wuhan insect vi...
AVK59479      94 CVkVLQTNR-LAPTYCEdiLpAYCDPTRWNLTsstwygEEIGICYGEgrcdtsclppfpckpcnldniay---------- 162 Nephila clavipe...

APG77855     201 --------------------rnsqqifsiycnittstivvLPTYFLQSYDNVALDYYNYTLHHPyit----lvdFSYQNV 256 Xinzhou nematod...
APG77752     364 ----------------------------------------EHFNFTAVSHSFFLSRFNHEFTIY----------HSPHGF 393 Hubei hepe-like...
YP_009315902 164 fvpvkrnnkvtwtaileyneedlskyqspgsfslkshmqqSSYYIKQLFDRSLPDDVKYETQIQqtecveslpfYDADGF 243 Lodeiro virus
YP_009337716 158 ------------------------------------------------------------------------rvFNSTNV 165 Hubei virga-lik...
YP_009345039 206 ---------------------plregqfefycnvsnnrplLVHKSLLNGDKRFVDPFSVLLQSDfpf-----ltFSDGGY 259 Xingshan nemato...
YP_009344995 139 ----------------------------ikfprdlhygmlTQHDSVDVHDIVPVDFFEHIVI------------ANATDG 178 Wuhan insect vi...
APG77767     118 ----------------------------tmdfspssftyeSPNGPLTVEDWTSVDFFSHVYL------------LNSNDR 157 Wuhan house cen...
ASA47335     123 --------------------------fvpknltlrdpisiLGNNFNLLTNLTPVSFFEWFYIV-----------KSADGR 165 Culex negev-lik...
APG76534     339 ----------------------------------vfngtaTNRHGTLSTDWGPLYSFVDA--------------GSWTDV 370 Wuhan insect vi...
AVK59479     163 -----------------yvyrldmaeptsfltekhnrlqpGTRGFTEVRANQQALLINYFYSVYnpy-----imYTQDNK 220 Nephila clavipe...

APG77855     257 FLP------------------------------------------------------Mlhssfsplqlkldqpfkyvcnd 282 Xinzhou nematod...
APG77752     394 FFLsdhfidslisldpphifsqttvf---------lyhtlpiwdyfkqvdllffsltS---------------------- 442 Hubei hepe-like...
YP_009315902 244 YHeniaylnhdwkrmcfslapqgsycdslwwvddyfdkttlvka------------------------------------ 287 Lodeiro virus
YP_009337716 166 LVRvhklafpgvgiymknvsdiygnlddsglryddlvladyeidgvrkfiftykymlNqssaaftdayriygdwdnvcve 245 Hubei virga-lik...
YP_009345039 260 RALv----------------------------------------------------fSqfvdsystvslatagfkyvcnd 287 Xingshan nemato...
YP_009344995 179 YHLfpqic---------------------------------------------lqqyTsysddlppsvvfkesddtlcvs 213 Wuhan insect vi...
APG77767     158 YSLipric---------------------------------------------ldhyTssnddqpqsvqfeftesqvcvh 192 Wuhan house cen...
ASA47335     166 YGLlpri----------------------------------------------cdetHrnsthlpknvhlehngdrvcli 199 Culex negev-lik...
APG76534     371 YNVlpslrllrlpgrdimfs---------------------ydatlnlvalksdpykPvtvpviiqpyyaegkgqefcmw 429 Wuhan insect vi...
AVK59479     221 YALitsec---------------------------------------------llytRktseifphhalqsyknsdtatk 255 Nephila clavipe...

APG77855     283 slfek---------------------------------------tsfvddynvfrsprgcenfiyfyeyeQHINICVDYL 323 Xinzhou nematod...
APG77752     443 ----------------------------------------------------------------------YNITIPVNNT 452 Hubei hepe-like...
YP_009315902 288 ----------------------------lleeipwyivyhdwnslkqsikdqvktdceiendihlrwnvtHCYQGDFKCM 339 Lodeiro virus
YP_009337716 246 nkvskfmyyyfgyiakyngtdkviphmplmvyvgrrnaaadyasefftyyqcteenlkepllvnvggldfLKYNKPNCTD 325 Hubei virga-lik...
YP_009345039 288 tlfae---------------------------------------ssiiddvnvfrsfrgcrnfvltegsdVSSKICVDHL 328 Xingshan nemato...
YP_009344995 214 -------------------------------------------------htslanvdcrplffpsvaaivTTFDFPIAFK 244 Wuhan insect vi...
APG77767     193 -------------------------------------------------qslhpetdcepewyesmekliVSYDYPVAYR 223 Wuhan house cen...
ASA47335     200 -------------------------------------------------etsytthscipklynsiftllQLYDFPIEFD 230 Culex negev-lik...
APG76534     430 vnpper-------------------------------------sralviydgptltewppftpvlavhdlDTYQPPICLD 472 Wuhan insect vi...
AVK59479     256 ecylq---------------------------------------kkpnvedcqslaededlenllqrlrnDSFLQIIAFN 296 Nephila clavipe...

APG77855     324 FLPTSS---------------LISKcpddwndfssaraprnyvtliirshlndtwsmikynidyfisrlsktilqisttt 388 Xinzhou nematod...
APG77752     453 FTFFTThnss--------tqyYREV------------------------------------------------------- 469 Hubei hepe-like...
YP_009315902 340 YGPFPCsdsanrvskc---------------------------------------------------------------- 355 Lodeiro virus
YP_009337716 326 YVKVSSdefqcnvifdlgnpfLKAIcpddyivkkdvvdhnkndfdtevncikvrtikks--------------------- 384 Hubei virga-lik...
YP_009345039 329 YQDFQA---------------LVDRcpedwytfdhavatfetytigindysevlwktipqvvtdllryfdrnhinvrvqd 393 Xingshan nemato...
YP_009344995 245 YNPYNYllhl--------kfrNQDPdvfgyaadttrgyfpisfinnlnyvsrsplsshfldrng---------------- 300 Wuhan insect vi...
APG77767     224 GNPYELvthi--------rygNQDPnvinyvssnklnhvfsvidgktyssavglshmylhg------------------- 276 Wuhan house cen...
ASA47335     231 GVPFSQgsfs--------ltnNKVIgadsyitnsvgktpivvdkvggsymltyesfds---------------------- 280 Culex negev-lik...
APG76534     473 YQPRPDmpln--------ghrRVTMgdgdvgrvv---------------------------------------------- 498 Wuhan insect vi...
AVK59479     297 FNPSGIeqls--------kseSSPLvhinsthairpdafqssdviadesihepv-------------------------- 342 Nephila clavipe...

APG77855     389 fdsfirtfdtyflkfldlfqrflsdfesgiffktsvyenffaylslflspsqfnlrqlikdsivfffktmtgnftqlpsd 468 Xinzhou nematod...
APG77752         --------------------------------------------------------------------------------     Hubei hepe-like...
YP_009315902     --------------------------------------------------------------------------------     Lodeiro virus
YP_009337716 385 ----------------------------------------------------------------wfselfvflekkvlhl 400 Hubei virga-lik...
YP_009345039 394 fekfykdfvdyvrsfg------------tltnvtvrfadqvfdgiganlrlldsftfrnfsenfvdyfwakamgvdveqi 461 Xingshan nemato...
YP_009344995 301 ------------------------------------------------------------sstvfsrnyiyfdsrvhsfs 320 Wuhan insect vi...
APG77767     277 --------------------------------------------------------------isspenyivlvdpsplkv 294 Wuhan house cen...
ASA47335     281 -----------------------------------------------------------------nqpfyivrnqrhlpt 295 Culex negev-lik...
APG76534         --------------------------------------------------------------------------------     Wuhan insect vi...
AVK59479     343 ----------------------------------------------------------------------avcftrtesy 352 Nephila clavipe...

APG77855     469 netlymdtnmfgldigkwLADAFTSILKPFWQLFLTILEDALNIISDFLFDL 520 Xinzhou nematode virus 1
APG77752     470 ------------------RLDTSRHTIPWYARPFFNLLEAFLRLIIKILFTL 503 Hubei hepe-like virus 1
YP_009315902 356 --------ldveehftspVTFHAVKVVRDVVKAILPYIKTIFTTVLGIIVDV 399 Lodeiro virus
YP_009337716 401 vegiikeiaqvlsesvkvLVDELVKVLKDMGPIFKPLLEDIFKDVKEIAKEV 452 Hubei virga-like virus 17
YP_009345039 462 rdtthfesihsvtsvsgwLAQAISSFVRPFWQVFLELLEDILDIIIRVLFDL 513 Xingshan nematode virus 2
YP_009344995 321 skdycyrieslyknpisvLASTLISVVSPIFYELLELLEIEVENIIRLIVKA 372 Wuhan insect virus 8
APG77767     295 nqsfcypiqsvyknplsaVINSIIDALEPIILKLLSILEQYLEKFLKIFIKA 346 Wuhan house centipede virus 1
ASA47335     296 enhqcfnllshysspltsIFHHISTFIRKELSYLVEFLKQLAGEIALILFKI 347 Culex negev-like virus 2
APG76534     499 ---------qdtpalacaPFKHISSYSVPGSIWLKSMLAFVIESIETVVAAA 541 Wuhan insect virus 21
AVK59479     353 sdpisrstlritkviiqlIIQVITSYVIELEDLLMSIIVVLLHAINSVLLEL 404 Nephila clavipes virus 3
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap