Conserved Protein Domain Family
TcdA

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COG1179: TcdA (this model, PSSM-Id:224100 is obsolete and has been replaced by 440792)
tRNA A37 threonylcarbamoyladenosine dehydratase [Translation, ribosomal structure and biogenesis]
Statistics
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PSSM-Id: 224100
Aligned: 24 rows
Threshold Bit Score: 210.232
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
19114114  90 EDEGISkgvpydeNLIREQLARNYAFFGEDGMERLRNSFVIVVGCGGVGSWVINMLARSGVQKIRIVDFDQVSLSSLNRH 169 fission yeast
15613818   1 ---------megeEGMLHQFSRNELAIGHDGLERLKQSKVAVLGVGGVGSFSVEALARSGVGRIVIVDKDDVDITNVNRQ 71  Bacillus halodurans
16079808     --------------------------------------------------------------------------------     Bacillus subtilis
15894195   1 --------------MRQHFLSRTELLIGKERLEKLKNSKVIVFGIGGVGSYAVEALTRSGVGRIVLIDDDTVCLTNINRQ 66  Clostridium acetobu...
15791662   1 --------------MMNDRFTRIKWLVGEEKFQKISQTKVLVCGLGGVGGICVDALYRSGFKNLTLIDADKFEITNQNRQ 66  Campylobacter jejuni
15645374   1 -------------------------MFKN-DFEKIRQQRVLICGVGGVGGFALDALYRVGIGQITIIDKDVFDVTNQNRQ 54  Helicobacter pylori...
15927208   1 ---------------MKHQFSRNELAIGQQGLDLLKQQTVVILGVGGVGSFAAEALARTNIGHIILIDKDDVDITNVNRQ 65  Staphylococcus aure...
731629    38 knkTVSrprqyddHLFREQLARNYAFLGEEGMRKIKEQYIVIVGAGEVGSWVCTMLIRSGCQKIMIIDPENISIDSLNTH 117 baker's yeast
549663    50 TKSDTDkyhqydeQFIRQSLKNNVEFLGEDTIEKLSNQYVVVVGAGGVGSWVVNSLVRSGCRKIRVVDFDQVSLSSLNRH 129 baker's yeast
15611759   1 ------------mSEPIDRFTRIRWLFKN-DFEKIRQQRVLICGVGGVGGFALDSLYRVGIGQITIIDKDMFDVTNQNRQ 67  Helicobacter pylori...
19114114 170 SIATLQDVGTPKTLAIKKAIKKFAPWIEVDARNALFNPDSADDLLSG---NPDFVIDAIDNIQTKVDLLSYCYNHKL-PV 245 fission yeast
15613818  72 IHALLSTVGRPKVDLMKERISDINPECEVIALKMFYTEETYEQFFSy---ePDYVIDASDTITYKIHLMKECLKRNI-PI 147 Bacillus halodurans
16079808   1 ----------------------------MIALKMFYTEETYEQFFDy---gLDYVIDASDTICYKIHLMKECLKRDI-PL 48  Bacillus subtilis
15894195  67 IQATFKTIAKPKVDVMKERILDINPNCQVETHRIFVTEDNISDLIAPd---TNYVIDAIDTVSAKISLILWCQKNNI-NI 142 Clostridium acetobu...
15791662  67 IHSE--NIGEEKAKVFERIYK-------VKGIVSKIDENFLKNFDLS---EFDLIIDAIDDIPAKVALAH-LIDFKKqIF 133 Campylobacter jejuni
15645374  55 IGSE--RIGESKVLVLQDLYKG------IQALNLHIDEAFLNSFNFR---DYDYILDCMDDLPIKTSLAIKCQNFAYgKF 123 Helicobacter pylori...
15927208  66 LHALTTTVGQSKVSLMEERIKLINPDCKVTPLHMFYTEETYEEIFDNy--dIDYFVDASDTIMYKVHLMKECLDRGI-KV 142 Staphylococcus aure...
731629   118 CCAVLSDIGKPKVQCLKEHLSKIAPWSEIKARAKAWTKENSHDLIFAdgeSPTFIVDCLDNLESKVDLLEYAHHNKI-DV 196 baker's yeast
549663   130 SCAILNDVGTPKVECLRRHMREIAPWCEIDPINELWTLQNGERLTLGn-gTPDFIVDCIDNIDTKVDLLEFAYNHGI-KV 207 baker's yeast
15611759  68 IGSE--RIGESKVLVLQDLYKG------IQALNCRIDEAFLNSFNFR---DYDYILDCMDDLPIKTSLAIKCQNFAYgKF 136 Helicobacter pylori...
19114114 246 IASTGSACKSDPTRVNIADISATSEDPLSRATRRRLRLL--GIMEGIPVVFSTEKP-DPRKASLLPLSEEEFEkgdvdel 322 fission yeast
15613818 148 ISSMGVANKMDPTRLRIADISKTSYDPIAKVIRTRLRKE--GIHKGIEVVYSDEQPiRIREDIRKEIVP---Eaa----e 218 Bacillus halodurans
16079808  49 ISSMGAANKTDPTRFQIADISKTHTDPIAKVVRTKLRKE--GIKKGVQVIFSDESPiVIREDVRKEVGn----------d 116 Bacillus subtilis
15894195 143 ISCMGTGNKLDPTRFEITDIYKTSICPLAKVMRHELRKR--GVKS-LKVLYSKEMPmKPKSDEVITCKEGCVCan----g 215 Clostridium acetobu...
15791662 134 ISSTGGARKLDPTRIKTTSIFKTHGDALAKKFRYELRKSgfKGNFDV--VFS------DE-------EAH---------- 188 Campylobacter jejuni
15645374 124 ISSMGSAKRLNPKHIQVGSVWESYGDKFGRKFRDFLKKRrfKGDFKV--VFS------PE-------IPH---------- 178 Helicobacter pylori...
15927208 143 ISSMGAANKTDPTRFTISDISKTHTDPMAKIIRQKLKKL--GIRKGIPVVFSDESPiVIREDVKDIVGd----------k 210 Staphylococcus aure...
731629   197 ISSMGVATKSDPTRVSINDISMTEFDPISRCVRRKLRKR--GIATGISVVFSNEML-DPRRDDILSPIDCEHRa-----i 268 baker's yeast
549663   208 ISSMGASAKSDPTKLNVGDLATTEEDPLARVVRRKLKKR--GILSGIPVVFSAEKP-DPKKAKLLPLPDEEYErgkvdel 284 baker's yeast
15611759 137 ISSMGSAKRLNPKHIQVGSVWESYGDKFGRKFRDFLKKRrfKGDFKV--VFS------PE-------VPH---------- 191 Helicobacter pylori...
19114114 323 SALPEFRARILPVIGPMPGIFGLTIATYVLTSIAKYPMDPI 363 fission yeast
15613818 219 SGKIRKAKMPPSSNAFVPSVSGLFMAGHVISKLLDGIEIQR 259 Bacillus halodurans
16079808 117 EAKIRKAKMPPSSNAFVPSVAGLIMGGHVVMDLLKDIEIKR 157 Bacillus subtilis
15894195 216 SRKCTAKRQIPASISFVPPVAGMIIGGEVIKDIMDS----- 251 Clostridium acetobutylicum
15791662 189 ------CKD-LGSFMGVTASFGLALASLALRKVLAKKS--- 219 Campylobacter jejuni
15645374 179 ------CIE-LGSFNAVTASFGLQIASEVVQDIINDKRK-- 210 Helicobacter pylori 26695
15927208 211 NAINRKGQMPPSSNAFVPSVVGLICASYVVNDVLKDIPVRR 251 Staphylococcus aureus subsp. aureus N315
731629   269 NAVRDEALRHLPELGTMPGIFGLSIATWILTKVSGYPMKEN 309 baker's yeast
549663   285 SALKDFRVRILPVLGTMPSLFGLTITTWILSNISDKPLEPV 325 baker's yeast
15611759 192 ------CIE-LGSFNAVTASFGLQIASEVVQDIIKNERQWN 225 Helicobacter pylori J99
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