Conserved Protein Domain Family
Rer1

?
pfam03248: Rer1 (this model, PSSM-Id:397380 is obsolete and has been replaced by 460860)
Rer1 family
RER1 family protein are involved in involved in the retrieval of some endoplasmic reticulum membrane proteins from the early golgi compartment. The C-terminus of yeast Rer1p interacts with a coatomer complex.
Statistics
?
PSSM-Id: 397380
Aligned: 119 rows
Threshold Bit Score: 170.787
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q5KPE9               71 ENTNVWAR---KWQGLLDRSTPHVLERWLVTLGLFLLFALNVILRQGWYIVCYALAIYILNLFLAFLQP-RFDP--SLAE 144 Cryptoco...
XP_001611309         17 rlQNRLAFfqrGRQAILDYISTHIVLRWIYFVILFYVFWYRVIAYASHFVIAYMYAVYALNSVIRFLTPlDF------QD 90  Babesia ...
Q57XM3               15 KFTDNIKM---TWSRLLDQTVPHRPLRWVMFVFMLSLYILRVYFCGGFYVISYVLGIHLLFLLVQVITP-LADE--DLGS 88  Trypanos...
Q4D9J0               15 EFKRKAHL---TYQRYLDKTVPHRAMRWAMFGFLLMFYILRVFFHGGFYVITYGMGIHLLYLLLLLVTP-LAED--EFAE 88  Trypanos...
Q4QBT9               15 TFLRKARV---TYKRYLDASVPHCALRWCFFAFLAILYVARVVTFGGFYVITYGLCIHLLYLLLLLITP-LSDP--DESE 88  Leishman...
EAX97405             14 IDKQEALM---RFESLLYQIKPYLWQRWCAFGFMMFLFLLRVFTWHAYYYIVYIIGLYLLSCVVEFISP-KRDP--ELYG 87  Trichomo...
EIJ89068              1 ---mKLQH---LIQSYADMSVGMIKQRWCAFLFLFVVFVWRIILTGGYRLVAYCLFLYFLHCFIGFCTPvDS-------- 66  Nematoci...
WGS:AFBI:EDEG_01145   1 ---mnIKT---IIQIYLDKLAPMKKERWVFLILFMILYFLRIIVIQQFFLITYCVSIYLLHGLIEFLTPkEE-------- 66  Edhazard...
EPR78825              1 ---meLTT---LFNHYLDKITPKRLERWIGFTLLEIFFLLRIYILNSHHLVTYIVSVYLLHSLVMFLTPrDE-------- 66  Spraguea...
A0CS82               14 KAIHRVKV---NYQKKIDRYILYKKSRWFFNLLLMLLYAYRIQNIGGFYIVTYIYCVYQLQLLIDYFTPlGL-PpvNLED 89  Parameci...
Q5KPE9              145 dla-adDVEEGApGLPgaGpaktpgglkgllngfsngEEDE-----------------EFRPFIRRLPEFKFWYSATKAN 206 Cryptoco...
XP_001611309         91 lcaaheAAHGGT-ILP---------------------SSEGnrteitlekmrhpdtvyEFRPFLRDMNEFTFWLCLVRAT 148 Babesia ...
Q57XM3               89 e-----------gQLP--Hta---------------aSPDE-----------------EFRPFVPRMQEFVVWCSMMKSV 123 Trypanos...
Q4D9J0               89 d-----------sPLP--Rta---------------aGNDG-----------------EFRPFVPRVQEFVVWKSMFRVV 123 Trypanos...
Q4QBT9               89 g-----------tPLP--Mt----------------hTDSD-----------------EYRPFMPKVQEFVVWKQMFTVL 122 Leishman...
EAX97405             88 e-----------eVLP--S------------------AKDG-----------------DYKPFVRRLPEFQFWCCCMPAS 119 Trichomo...
EIJ89068             67 -------------ELP--Dpfdieeee--tvisspikKSGD-----------------ESKPFIRRLPEFEYWLQSIKAC 112 Nematoci...
WGS:AFBI:EDEG_01145  67 -------------NIP--Dpfdnfed-----dvyeqtTLDD-----------------EYRPFIRRMPEYKFWMFCMQLI 109 Edhazard...
EPR78825             67 -------------SIP--Dpfeefde----yeeyipqTVDD-----------------EFRPFLRRLPEFDFWCRSMGLI 110 Spraguea...
A0CS82               90 eeedddQFQNDFsELP--Ttlsn-----------kneLNDK-----------------EFRPLLRTTSEFKVWQKSVFSV 139 Parameci...
Q5KPE9              207 AIALLCTITRATDVPVYWPILLVYFFTLFGLTMRRQIQHMIKYRYVPFDLGkKARYG 263 Cryptococcus neoformans
XP_001611309        149 YVALFCMLFDALDVPVFWPLLVVYFVGLFALTMREQLENMIKYKYVPFNIG-KRTYG 204 Babesia bovis T2Bo
Q57XM3              124 LVCTFLTLFRILDIPVFWPVLLLYFIFLTIIQVGERIRHMIRHRYVPWSAG-KPKFV 179 Trypanosoma brucei
Q4D9J0              124 SICLFLTLFNFLDIPVFWPILLLYFIVLTVTQMGSRIKHMMKHRYVPWNAG-KPKYV 179 Trypanosoma cruzi
Q4QBT9              123 FVCLFLTMFSFLDIPVFWPILVLYFLALFATQVGGRVRHMIKHGYVPWNAG-KPKFV 178 Leishmania major
EAX97405            120 VLACFFSLMP-FDLPVYAPLLFVYFIVVSVFVFRKRIMHMIKYKYVPWDTG-KQKYQ 174 Trichomonas vaginalis G3
EIJ89068            113 FAGIVMTFFPVFNIPVFTPILIIYFCGLVYLTVIKIRKHMEKYKYNPFFNA-KKIYK 168 Nematocida parisii ERTm3
WGS:AFBI:EDEG_01145 110 GTAFMCTFFDFLDIPVYVPILIFYFIVIAALTAKNMHRHMKKYKYNPFFKA-KDVYV 165 Edhazardia aedis USNM 41457
EPR78825            111 LFAWFTTFFSFFNITVYVPILILYFIFMIFLTAHKMYKHIKKYHYNPFFGD-KEQYG 166 Spraguea lophii 42_110
A0CS82              140 IFAYFCTYIPIWDIPVYWPFLFCYFFVIVGMSIRKYIKHMKKYGYTILDFT-KKK-- 193 Paramecium tetraurelia
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap