Conserved Protein Domain Family
AppB

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COG1294: AppB (this model, PSSM-Id:224213 is obsolete and has been replaced by 440905)
Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]
Statistics
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PSSM-Id: 224213
Aligned: 46 rows
Threshold Bit Score: 202.47
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15890882   6 LIDYEILRVIWWLLLGVLLIGFAVTGGFDLGTGALL---PFVAKTDIERRVVINSIGPVWEGNQVWLILGGGAIFAAWPP 82  Agrobacterium tumef...
15613440   1 ----MNEVYIAIIIIWSFLFIYSIAGSIDFGAGFWAm-fYLKRQETKAASIANRYLSPSWEVTNVFLVLLVIALVGFFPG 75  Bacillus halodurans
15616536   1 ----MGLELIGITVLWLFLFLYVIVGSIDYGAGVFNahsILTNKQHILSKVIQRYLSPVWEVTNVFFVFFVVGIIGFFPD 76  Bacillus halodurans
16080124   1 -MEISTDALIAISIIWGFVFIYAVMATMDFGAGFWSm-iYLNKEHMKATDIANRFLSPTWEVTNVFIVAIVVALFSFFPG 78  Bacillus subtilis
15791472   4 GLELEGLQIYWWLILSLLGGLLVFMFFVQGGQTLIDel----sKDELEKTMLVNSLGRKWELGFTTLVLFGGAAFAAFPL 79  Campylobacter jejuni
16120024  10 TYLVDSLPEVWFGAVVFALGMYIVLDGFDFGIGMLYat----rtDEHERETFLAAFGPVWDANEVWIVAFGTMLLAAFPR 85  Halobacterium sp. N...
16120338  10 TYLVDSLPEVWFGAVVFALGMYIVLDGFDFGIGMLYat----rtDEHERETFLAAFGPVWDANEVWIVAFGTMLLAAFPR 85  Halobacterium sp. N...
10803587  10 TYLVDSLPEVWFGAVVFALGMYIVLDGFDFGIGMLYat----rtDEHERETFLAAFGPVWDANEVWIVAFGTMLLAAFPR 85  Halobacterium sp. N...
10803716  10 TYLVDSLPEVWFGAVVFALGMYIVLDGFDFGIGMLYat----rtDEHERETFLAAFGPVWDANEVWIVAFGTMLLAAFPR 85  Halobacterium sp. N...
16329778   5 EPLQHFLPQVWFFILGLFLFLYVLLDGFDLGVGILSlt----asSEERRSILMTSLGNVWDANETWLVLMGGSLFGAFPL 80  Synechocystis sp. P...
15890882  83 LYAVSFSGFYLAMFATLFALILRPVGFKYRSKRESPAWRSGWDWALFVGGFVPALIFGVAIG-NVLQGVPFHFNDDlr-- 159 Agrobacterium tumef...
15613440  76 AAASLGTLMIVPFCLVLFLLIIRSAFMVYSY--SVQKYSNMLIVISGITGLLIPALLISILP--AAIGGFIETVGD---- 147 Bacillus halodurans
15616536  77 SAFYFGSILLIPASVSIILLALRGSYYAFES--YGAKGHKGYAFMYGATGIFIPASLSVVLT--ISEGGFVSFENG---- 148 Bacillus halodurans
16080124  79 ATFVLGTVLLIPGSMILLLLAIRSGFLVFSN--TAKER-KTLRYISGISGFIIPAILILVLP--VTHGGFIEKTDG---- 149 Bacillus subtilis
15791472  80 FYSTSFGGAYWAWLCILFCFILQAVAYEYRKKENNVYGSKTYEIFLKINGYLGVFLIGVAVS-SFFSGSEFILNEHnfvs 158 Campylobacter jejuni
16120024  86 VYSRLLADNYLLALGFVVALVFRGLGPELREQREDERWKRYTDYAFVGGSVFAPLLLGMLAGrWLFAGATLP-------- 157 Halobacterium sp. N...
16120338  86 VYSRLLADNYLLALGFVVALVFRGLGPELREQREDERWKRYTDYAFVGGSVFAPLLLGMLAGrWLFAGATLP-------- 157 Halobacterium sp. N...
10803587  86 VYSRLLADNYLLALGFVVALVFRGLGPELREQREDERWKRYTDYAFVGGSVFAPLLLGMLAGrWLFAGATLP-------- 157 Halobacterium sp. N...
10803716  86 VYSRLLADNYLLALGFVVALVFRGLGPELREQREDERWKRYTDYAFVGGSVFAPLLLGMLAGrWLFAGATLP-------- 157 Halobacterium sp. N...
16329778  81 AYATILNALYLPAVIMVVGLILRAVSFEFR---ENANRKLVWNIAFGVGSFLAALGQGFALG-SVFEGITVDAQGH---- 152 Synechocystis sp. P...
15890882 160 ifYDGTTLFELLNPYALLCGLVSVSMLVMHGAAWLVLK-TEGPVAARARSFGSIAALATTVLFALGGVFLWLGVDGYr-- 236 Agrobacterium tumef...
15613440 148 --RQYILLNQLFTSPTFYTHIGFGLSTELFLSALLLSDyAREAQIESTFSVYRRNAIVLGPITLAFAVAAIFTLLPE--- 222 Bacillus halodurans
15616536 149 --VPVLDYTALLTSPLTWSIVVLSLVAVLYISSVFLTWyAHKTGDMKATALMRKYAIIWSVPLIVAAGGIIFELRNH--- 223 Bacillus halodurans
16080124 150 --IYNLNMSKIFSSPNAYSFIGFAILSTLFLSSLLLADfSNVAEEQDAYRAYRKSALITGPISLLFAVCIMVTMRNE--- 224 Bacillus subtilis
15791472 159 wqNPLHGLELLLNPFNYLLGLALVFLARLLGAAYFMNNiNDENIKIRAMKKLMINSILFLPFFLGFLAWIFLKDGFSvdt 238 Campylobacter jejuni
16120024 158 ---------------VVLTGVGLVAVSIVTGAAFLAAK-TDSGLASELRSYGVGATVAYLGGVVVLLGTVVATDAGG--- 218 Halobacterium sp. N...
16120338 158 ---------------VVLTGVGLVAVSIVTGAAFLAAK-TDSGLASELRSYGVGATVAYLGGVVVLLGTVVATDAGG--- 218 Halobacterium sp. N...
10803587 158 ---------------VVLTGVGLVAVSIVTGAAFLAAK-TDSGLASELRSYGVGATVAYLGGVVVLLGTVVATDAGG--- 218 Halobacterium sp. N...
10803716 158 ---------------VVLTGVGLVAVSIVTGAAFLAAK-TDSGLASELRSYGVGATVAYLGGVVVLLGTVVATDAGG--- 218 Halobacterium sp. N...
16329778 153 --FAGTMWDWLT-WRSVIVALTLIQGYVLIGSTYLILK-TEGELQKTYFKTAAIATWTTLAGAVFIT-ISTPAFSEE--- 224 Synechocystis sp. P...
15890882 237 --FTSEvvtdgpsnplsktvevaggvwfanYAAHPWMMLAPALGLVFPLFAFILFRARRE---------VLALLSSSLAI 305 Agrobacterium tumef...
15613440 223 --AAWMve---------------------nMVNEWLLFSLSLFAFAIGYSALWWPSK-KGeig----qpRVAVLLIVAQF 274 Bacillus halodurans
15616536 224 --NIDHfe---------------------sIMQLWWMFAISFVLWALTLRLIWLKRH-FGa----------AVWLMIFQF 269 Bacillus halodurans
16080124 225 --ANWLys---------------------gMMNDFSWIIASFITFVIAGIALFLPNKSFGqni---gkpRLALVAIGIQY 278 Bacillus subtilis
15791472 239 ngVVSMsan-------------------lyLYNFLNQMIFAVLLVIGVILVLLGMVQGTKgcskaiftlGLGTVLTVFAL 299 Campylobacter jejuni
16120024 219 --AASA------------------------VLSLPVAAVVALSIVAGLGGSVLARRGRYR----------AWLASALALP 262 Halobacterium sp. N...
16120338 219 --AASA------------------------VLSLPVAAVVALSIVAGLGGSVLARRGRYR----------AWLASALALP 262 Halobacterium sp. N...
10803587 219 --AASA------------------------VLSLPVAAVVALSIVAGLGGSVLARRGRYR----------AWLASALALP 262 Halobacterium sp. N...
10803716 219 --AASA------------------------VLSLPVAAVVALSIVAGLGGSVLARRGRYR----------AWLASALALP 262 Halobacterium sp. N...
16329778 225 --ARAQ------------------------LFTAPLVYIFAAIPLVGLLFIGLLLRSLYLre------eNTPIIWTFLVF 272 Synechocystis sp. P...
15890882 306 FGIIATVGLTMFPFILPSSVDprssLTVWDASSSHMTLFNMLVVTLIFVPMIVAYTSWVYRVLWGKVDEKAIRDD 380 Agrobacterium tumefacien...
15613440 275 GLASFAYGSAHMPYLLYPH------LTIYDAFTNETMFYSLFIGYLIGMALLIPAFILFWWLFMKDKRYLRKDLT 343 Bacillus halodurans
15616536 270 MFAFFGYGISHYPYLLYPH------LTIYDGFTNEAMAISLIVVFILGMLLLLPSLYLLLRLFLFDKKYVKGKRE 338 Bacillus halodurans
16080124 279 FLASYAYGRAHLPYMIYPD------VTVMSGFTEPATFRALFATYIVAFIILFPGFFFFWKMFMRDKRYIRQEE- 346 Bacillus subtilis
15791472 300 LSSIGLGQSAFYPSLSDLQSS----LTLKNASSSYYTLSVMAYVS-LLVPFVLAYIIYVWNAMDKVKITREEIAN 369 Campylobacter jejuni
16120024 263 TLLTLLVAVLLYPTVYPPTG-----LLVREAVVSPLALNLVTVLGFPVLLLVLWYFKFLYGVFSGPIE-GEGYGG 331 Halobacterium sp. NRC-1
16120338 263 TLLTLLVAVLLYPTVYPPTG-----LLVREAVVSPLALNLVTVLGFPVLLLVLWYFKFLYGVFSGPIE-GEGYGG 331 Halobacterium sp. NRC-1
10803587 263 TLLTLLVAVLLYPTVYPPTG-----LLVREAVVSPLALNLVTVLGFPVLLLVLWYFKFLYGVFSGPIE-GEGYGG 331 Halobacterium sp. NRC-1
10803716 263 TLLTLLVAVLLYPTVYPPTG-----LLVREAVVSPLALNLVTVLGFPVLLLVLWYFKFLYGVFSGPIE-GEGYGG 331 Halobacterium sp. NRC-1
16329778 273 SLSFIGLGFIIFPNIIPPS------VTIYEAAAAPSSLVFMLTFIGFLIPILLFYNIYNYLVFRGKIVTD----- 336 Synechocystis sp. PCC 6803
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