2EJ4


Conserved Protein Domain Family
zf_ZIC

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pfam18366: zf_ZIC (this model, PSSM-Id:408166 is obsolete and has been replaced by 436441)
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Zic proteins zinc finger domain
This is the ZF1 (Zinc Finger 1) domain found in Zic family proteins found in Eukaryotes. In humans, there are five members of the Zic family that are involved in human congenital anomalies. One of them, ZIC3, causes X-linked heterotaxy (HTX1), which is a left-right axis disturbance that manifests as variable combinations of heart malformation, altered lung lobation, splenic abnormality and gastrointestinal malrotation. Zic faily proteins contain multiple zinc finger domains (ZFD), which are generally composed of five tandemly repeated C2H2 zinc finger (ZF) motifs. Sequence comparison analysis reveal that this N-terminal ZF (ZF1) domain of the Zic zinc finger domains is unique in that it possesses more amino acid residues (6-38 amino acids) between the two cysteine residues of the C2H2 motif compared to Gli and Glis ZF1s or any of the other ZFs (ZF2-5) in the Gli/Glis/Zic superfamily of proteins. Mutations in cysteine 253 (C253S) or histidine 286 (H286R) in ZIC3 ZF1, which are found in heterotaxy patients, result in extranuclear localization of the mutant ZIC3 protein. Furthermore, mutations in the evolutionarily conserved amino acid residues (C253, W255, C268, H281 and H286) of ZF1 generally impair nuclear localization.
Statistics
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PSSM-Id: 408166
Aligned: 17 rows
Threshold Bit Score: 73.5682
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2EJ4_A         8 QPIKQELSCKWIDEAQlSRPKKSCDRTFSTMHELVTHVTMEHVGGP 53  human
EDO35944      23 QPLSHVVMCEWIEP---GSKGKPCGRQFFRMHDIVAHLSEDHVGGP 65  starlet sea anemone
Q6DJQ6       216 QPIKQELSCKWLEESPmNRPQKTCDRTFSSMHELVTHMTMEHVGGP 261 tropical clawed frog
Q8N9L1       122 QPIKQELICKWLAADG-TATPSLCSKTFSTMHELVTHVTVEHVGGP 166 human
KPP79744     282 QPIKQELICKWLDPED--AAKKLCSKTYGTMHELVTHVTVEHVGGP 325 Asian bonytongue
XP_007237570 216 QNLAHELVCKWRDGQE-GAGKPPCARTFGTMYELVTHVTIEHVGGP 260 Mexican tetra
XP_014782012 244 HPIKQEHTCMWVETDQ-PEPKKPCNKTFPSMHEIVAHITVEHVGGP 288 Octopus bimaculoides
XP_011443175 181 PTIKQERTCLWVDPEQ-SDPKKPCNKVFYTMHEIVNHITIDHVGGP 225 Pacific oyster
KFM62097     177 NPIKHEMTCLWIDSDQ-MSPKKTCGKMFTSMHEIVSHITVEHVGGP 221 Stegodyphus mimosarum
KAE8604286   245 QAIKQELICKWIEEEH--HPKKLCSKTFSTMHELVTHVTVEHVGGP 288 tropical clawed frog
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