Conserved Protein Domain Family
STKc_CDK12

?
cd07864: STKc_CDK12 
Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an RS domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
?
PSSM-Id: 270847
Aligned: 8 rows
Threshold Bit Score: 576.754
Created: 24-Sep-2008
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Feature 1:active site [active site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                       ####    #            # #                #             #           
AAI29249      272 WGKRCVdKFDIIGIIGEGTYGQVYKAKDKdTGELVALKKVRLDNEKEGFPITAIREIKILRQLnHRSVVNMKEIVTDKqd 351  zebrafish
XP_789337     490 WGERCVdVFEIINQIGEGTYGQVYKARDKdTGELVALKKVRTDNEKEGFPITAVREIKILRQLnHDSVIRLHEIVTDKqd 569  purple urchin
NP_730643     796 WGERCVdVFEMIAQIGEGTYGQVYKARDHhTNDMVALKKVRLEHEKEGFPITAVREIKILRQLnHRNIVNLHEIVTDKqd 875  fruit fly
NP_001128283  702 WGKRCVdKFDIIGIIGEGTYGQVYKAKDKdTGELVALKKVRLDNEKEGFPITAIREIKILRQLiHKSVVNMKEIVTDKqd 781  western clawe...
P46551        303 WYKTNLtHYTMLDQIGEGTYGQVYKAVNNlTGEQVALKRVRLENEKEGFPITAIREIKILRQLhHKNIVRLMDIVIDDi- 381  nematode
XP_002131391  664 WGSMCVdEYAFISITGEGTFGQVYKARDKhTDEICALKKVRLDNEREGFPITAVREIKILRQLqHRNIVCLKDVLTDKsd 743  Ciona intesti...
Q9NYV4        719 WGKRCVdKFDIIGIIGEGTYGQVYKAKDKdTGELVALKKVRLDNEKEGFPITAIREIKILRQLiHRSVVNMKEIVTDKqd 798  human
XP_425866     719 WGKRCVdKFDIIGIIGEGTYGQVYKAKDKdTGELVALKKVRLDNEKEGFPITAIREIKILRQLiHRSVVNMKEIVTDKqd 798  chicken
Feature 1                        ####  # ##                                     # # ## #          
AAI29249      352 aLDFKKDKG-AFYLVFEYMDHDLMGLLESG-LVSFSHEHVQSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNsGQIKLA 429  zebrafish
XP_789337     570 aLDFKKDKG-AFYLVFEYMDHDLMGLLESG-LVNFSEEHVRSFMKQLLDGLNYCHKRNFLHRDIKCSNILLNNkGHIKLA 647  purple urchin
NP_730643     876 aVEFRKDKG-SFYLVFEYMDHDLMGLLESG-MVDFNEENNASIMKQLLDGLNYCHKKNFLHRDIKCSNILMNNrGKVKLA 953  fruit fly
NP_001128283  782 aLDFKKDKG-AFYLVFEYMDHDLMGLLESG-LVQFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNsGQIKLA 859  western clawe...
P46551        382 sMDELKRTRaNFYLVFEYVDHDLIGLLESKeLVDFNKDQICSLFKQLLEGLAYIHNTGFLHRDIKCSNILVNNkGELKIA 461  nematode
XP_002131391  744 aTDFRKEKEcAFYLVFEYMDHDLMGLLESG-MVHFNENHIKSFMKQLLDGLNHCHKKGFLHRDIKCSNILLNNkGEIKLA 822  Ciona intesti...
Q9NYV4        799 aLDFKKDKG-AFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNsGQIKLA 876  human
XP_425866     799 aLDFKKDKG-AFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNsGQIKLA 876  chicken
Feature 1         #  #             # #### #                                     ##                
AAI29249      430 DFGLARLYNSEEs-RPYTNKVITLWYRPPELLLGEErYSPAIDVWSCGCILGELFTkKPIFQANqELLQLELISRLCGSP 508  zebrafish
XP_789337     648 DFGLARLYHADDktRPYTNKVITLWYRPPELLLGEErYGPAVDVWSCGCILGELFTqRPIFQANqELAQLELISRICGTP 727  purple urchin
NP_730643     954 DFGLARLYNADDreRPYTNKVITLWYRPPELLLGEErYGPSIDVWSCGCILGELFVkRPLFQANaEMAQLETISKICGSP 1033 fruit fly
NP_001128283  860 DFGLARLYSSEEs-RPYTNKVITLWYRPPELLLGEErYTPAIDVWSCGCILGELFTkKPIFQANqELAQLELISRLCGSP 938  western clawe...
P46551        462 DLGLARLWEKES--RLYTNRVITLWYRPPELLLGDErYGPAIDVWSTGCMLGELFTrKPLFNGNnEFGQLELISKVCGSP 539  nematode
XP_002131391  823 DFGLARFFNKDEq-RPYTNRVITLWYRPPELLLGEEmYTPSIDIWSCGCILAELFTkKPLFQADrELAQLECISRVCGSP 901  Ciona intesti...
Q9NYV4        877 DFGLARLYNSEEs-RPYTNKVITLWYRPPELLLGEErYTPAIDVWSCGCILGELFTkKPIFQANlELAQLELISRLCGSP 955  human
XP_425866     877 DFGLARLYSSEEs-RPYTNKVITLWYRPPELLLGEErYTPAIDVWSCGCILGELFTkKPIFQANlELAQLELISRLCGSP 955  chicken
Feature 1                                                                           
AAI29249      509 CPAAWPDVIRLPYFNTMRPKKQYRRRLREEFSFL-PTPALDLLDHMLTLDPSRRCTAEQALASQFL 573  zebrafish
XP_789337     728 TPAVWPDVIRLPLFNTMKPKKMYNRRLREEFSLL-PKDALDLLDGMLTLDPDKRTTAEDALNCGWL 792  purple urchin
NP_730643    1034 VPAVWPNVIKLPLFHTLKQKKTHRRRLREDFEFM-PAPALDLLDKMLDLDPDKRITAEDALRSPWL 1098 fruit fly
NP_001128283  939 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFV-PTPALDLLDHMLTLDPSKRCTAEQTLQSDFL 1003 western clawed frog
P46551        540 NVDNWPELTELVGWNTFRMKRTYQRRIREEFEHImPREAVDLLDKMLTLNPEKRISAKEALNHPWI 605  nematode
XP_002131391  902 CPAVWPDVIKLPHFHTMKPKRQHRRKLREDFSYL-PTLAIDLLDQMLTLDPSKRFTAEEALNCPWL 966  Ciona intestinalis
Q9NYV4        956 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFI-PSAALDLLDHMLTLDPSKRCTAEQTLQSDFL 1020 human
XP_425866     956 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFI-PSSALDLLDHMLTLDPGKRCTAEQALQSDFL 1020 chicken

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap