Conserved Protein Domain Family
YIF1

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pfam03878: YIF1 (this model, PSSM-Id:397797 is obsolete and has been replaced by 461081)
YIF1
YIF1 (Yip1 interacting factor) is an integral membrane protein that is required for membrane fusion of ER derived vesicles. It also plays a role in the biogenesis of ER derived COPII transport vesicles.
Statistics
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PSSM-Id: 397797
Aligned: 106 rows
Threshold Bit Score: 173.509
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EHY57539      73 ND----P-AAQMGF-------QVGQTAMKA--GQEYMEQ--NLNRYIS--VSALKHYFNVSNSYVVRKLLLVLFPWRH-- 132 Exophiala derma...
XP_656389     29 NNiatnP-LASAGL-------SVAQNYLNQ--GDQLLKS--QLGGIFS--FDAWRYYFNVNTSFVLKKILMIIMPYPFl- 93  Entamoeba histo...
CDS41232      89 VN----QfAQNVAM-------QYGSEAIGQ--GRQLVQE--KVGKYFS--LSKLKHYFAVDNAYVAGKLGILLFPFFH-- 149 Echinococcus mu...
XP_001942801 131 SN----PlLAGVTV-------RYGQKILGQ-----VVDE--NVGKYTSgiSSEIKRYFAVDTRYVISKLGLLLFPFVH-- 190 pea aphid
Q20913        96 SD----P-MLNAAK-------QFGGQFAEQ--QKE------KLTKYLG--TFNLKYYFAVDNAYVGKKLGILFFPFFH-- 151 Caenorhabditis ...
XP_015787835  40 NQ----QlGNHMAQifqdqvsQYSDNLVSK--SKTWVGN--N-----------LKYYFAVDTGYVLKKILLIFFPFTH-- 98  two-spotted spi...
Q54XV4       133 SQisdnP-LTQAGLty---glNYGQTLFSG--GKQYVDS--NFGKYFS--FSTLKSYFNVNNSYVFNKIKLLIFPYTQ-- 200 Dictyostelium d...
EFA81589      87 SNfssnP-LAQASLsy---giNYGQTLFNG--GKQYVDS--NLGKYIS--FSSLKGYFNVNTSYVFNKIKLILFPFRQ-- 154 Heterostelium a...
XP_004361058  90 SSissnP-LAQVGF-------SYGQSLFND--GKQYVDS--NIGKYFS--FSSLKSYFNVNTSYVFNKIKLIIFPFPQ-- 153 Cavenderia fasc...
EFC49411      92 QN----P-TADFMI-------NMGVNQLYGsvGEKTNEVtsRYWQWFDg----LKCYFNVTNSYVSRKLLLVLFPFKKfd 155 Naegleria gruberi
EHY57539     133 KPWTRQQARMTTsSTaadgtmsqqtysfNYLPPRDDLNSPDMYIPIMALITYILLSTVLAGIRGSFHPELLGSITSTAIA 212 Exophiala derma...
XP_656389     94 GTWERKYVIGEDqSK-------------LYNVPQEDIYAPDLYIPLMGFISYVLAIGFYYGSKGTFTPETLSMTTTLCLI 160 Entamoeba histo...
CDS41232     150 TRWDLQYDAMGV------------------VSPRRDINSPDLYIPAMAFITYVVAAGVSLGVEGRFAPDLLGILSSQSFF 211 Echinococcus mu...
XP_001942801 191 TDWSIMLESTEQsDDr-----------rR-ARPKTDVNAPDLYIPTVAFVTYLLFLGLILGKHGQFSPELLSVQASRVLA 258 pea aphid
Q20913       152 KDWSLKFAGSADp-----------------APAREDVNAPDLYIPLMSFLTYILVSGFVLGTQGRFSPEILGILTSNALI 214 Caenorhabditis ...
XP_015787835  99 KDWSLKYRNDEQ------------------IAPRDDLNAPDLYIPWMAFVTYILVAGYLLGVNDRFSPEQLGIQASSALA 160 two-spotted spi...
Q54XV4       201 KTWKRRIGRTSDvDS--------------YLPPRDDINAPDLYIPLMAFITYFLLYGFQMGMEKKFSPDYLGACITKGIV 266 Dictyostelium d...
EFA81589     155 KLWKRRILKQGDnDH--------------YLPPRDDINAPDLYIPMMAFVTYFLLFGFQMGMKNSFSPDKLGASISKGII 220 Heterostelium a...
XP_004361058 154 KTWKRRIYRVGDvDS--------------YLPPRDDINAPDLYIPLMAFVTYYLLYGFQLGMGREFSPDKLGTAISKGIV 219 Cavenderia fasc...
EFC49411     156 TSYEYNNNNQNQtQE-------------------RHLSDPDLYIPLMGYITYVLLVCFIMGAHKEFKPELLYSIGMKGFI 216 Naegleria gruberi
EHY57539     213 VVIFEIIVLKLAMYML-SISnD-SQLLDLVAYSGYKFVGVIVTLFLSEVltggrGTNNwVGWTLFLYTWYANAFFLLRSL 290 Exophiala derma...
XP_656389    161 LISLEVMILKFLEYMLfNYS-SdFRI--YLSYVSYVFVPVLMCTFVGSL-----QIPY-LTYIALLFFGTSYAFFLYKTF 231 Entamoeba histo...
CDS41232     212 WLILEVCMLTLALYLL-NIQ-SsLGYLDLLAYCGYKFVHMITVVLVALV-----LSAP-GYYFALVWTGLAFAFFQIRSL 283 Echinococcus mu...
XP_001942801 259 WEVIVVLVEIMALYVT-NIQ-SsLRAFDLTAYSGYKYFGIISCIPIGLL-----FGET-AFYLALLYIGIAFMYFLLFSM 330 pea aphid
Q20913       215 WVILENIVIFISKYIL-NIS-QsLSVWHSLAYSTYKFAHMIVCLLLFMV-----GDKT-FYYGALAYSSLALVIFLLRSV 286 Caenorhabditis ...
XP_015787835 161 WLIFEVLATMIILYSF-NLM-SaFGFFHVLSLSGYKFVPMIAALLIALP-----FSSM-GYYISLAYGSLALCYFLIRNI 232 two-spotted spi...
Q54XV4       267 FWAIELLIFKCGFFFS-NSNs--IPFYDMISYSGYKYVLMVIFQIATIL-----LGSY-VSYIIKCVLSVSIAFFMLKTL 337 Dictyostelium d...
EFA81589     221 FWLLEIGFFKLGFFFT-NSYs--IPMYDMIAYSGYKYVLLVLTMVATML-----AGGA-VSLFVRLYTIACIGWFMICTL 291 Heterostelium a...
XP_004361058 220 GWLIEIGIFRLGSFFS-NSYs--IPIYDMIAYSGYKYVLMVITIISSIL-----TGGY-ISFFVKIYLVACLGVFILKTL 290 Cavenderia fasc...
EFC49411     217 TSLLEIAIVKFGFYAL-GVQ-SsLGVLDVAAFSGYKYIGIIITLVLSLL-----FGNY-AYYPSLLILGIMMVTFMIKSL 288 Naegleria gruberi
EHY57539     291 KYVLLPDSSSDptamrggsSYTvaraqKNRRTYFLALYAfLIQMLFMWILS 341 Exophiala dermatitidis NIH/UT8656
XP_656389    232 FGSLASIQT------------------EENKKRIYSICVgVFQIILIFFMM 264 Entamoeba histolytica HM-1:IMSS
CDS41232     284 KLQVLPQADRQa-------SLS------PRRGVYFLVCAaLFQPFIIWWLT 321 Echinococcus multilocularis
XP_001942801 331 RWQLNSIATVAnvgqpvvmVEY-----KRKRTLYFLILAvAIQPITAWYLI 376 pea aphid
Q20913       287 SHFMFDSSGSYg-------SEE-----GRKRKLILVAFVvITQPLIMWWLT 325 Caenorhabditis elegans
XP_015787835 233 HMAIETSPAT----------QG-----GGRQSTIKVIFFcLVQPLLMYHLT 268 two-spotted spider mite
Q54XV4       338 RLVFSSVSGAHdhis-pdyHES-----GKIKNYFVFGFS-VAQALLCFLV- 380 Dictyostelium discoideum AX4
EFA81589     292 RVVLLNDNNMHsdm---hhFEG-----TTKRKYFVFAVA-ILQVVLILLYS 333 Heterostelium album PN500
XP_004361058 291 RVVMVSDNSANshhdmhqqHEG-----SAMRNYFVFGVA-MLQCVILFFFN 335 Cavenderia fasciculata
EFC49411     289 RRSSVHSSDNSmrl---rlDTN-----TAKRNYFIFIVA-ILQIPLFFFLT 330 Naegleria gruberi
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