Conserved Protein Domain Family
HicB

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COG1598: HicB (this model, PSSM-Id:224514 is obsolete and has been replaced by 441206)
Predicted nuclease of the RNAse H fold, HicB family [Defense mechanisms]
Statistics
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PSSM-Id: 224514
Aligned: 43 rows
Threshold Bit Score: 35.836
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15965793   1 MRNYIGLIHKD----AESDYGVSFPDFSGVVTAGADLDDARAMAEEALALHIEGLVEDGEAIP---EPSSLEVVMSDAE 72  Sinorhizobium meliloti
16127415   1 MADYIALIHKD----ADSAFGVSFPDLPGCISVGETLEEARANAEEALALHVEGMIEDGETLP---APSALDEVMAAPG 72  Caulobacter crescent...
3183250    7 IMRYPVTLTPA----PEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFEDNELIPlpsPLNSHDHFIEVPL 81  Escherichia coli
3183250    7 IMRYPVTLTPA----PEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFEDNELIPlpsPLNSHDHFIEVPL 81  Escherichia coli
15964372   3 KTVDEALRNAAaa-iADWIDDGEVPEPRSIDELRQDPEVAEQLADGAAFVVVPAIVEDSRPVKaniSMEAGLLAAIDEA 80  Sinorhizobium meliloti
15901615   2 LVTYPALFYYDdtdgTEATYFVHFPDFEYSATQGEGISEALAMGSEWLGITVADLIESDGELPqpsDINSLSLIDNDPF 80  Streptococcus pneumo...
16122069   1 MAIYPAYVHVD----NDGSASGYFPDVKGCIFAINAGEDLFAEASSALDAHFEALVSEGIEIPe--AHDMPYHVYRNPC 73  Yersinia pestis
16123519   1 -MIYPIFIFKT-----VEGFDGYFPDIDGCFFAGNTFADISKNAEEAFAVHIEALMNEGFPLPs--PPKDPHRYIDDPR 71  Yersinia pestis
15801705   7 IMRYPVTLTPA----PEGGYMVSFVDIPEALTQGETVAEAMEAAKDALLTAFDFYFEDNELIPlpsPLNSHDHFIEVPL 81  Escherichia coli O15...
13471996   1 MKQYIGLIHKD----AGSDFGVSFPDFPGVITAGKDLDDARSMAEEALTLHIEGLVEDGEAIP---EPSSLQAVMADAD 72  Mesorhizobium loti
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