Conserved Protein Domain Family
YokD

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COG2746: YokD (this model, PSSM-Id:225351 is obsolete and has been replaced by 442043)
Aminoglycoside N3'-acetyltransferase [Defense mechanisms]
Statistics
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PSSM-Id: 225351
Aligned: 11 rows
Threshold Bit Score: 262.329
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
15805626   9 EDTAIAHADAPRTRASLAADLRSLGVQAGDVLLVHSSLSRLGWVAGG--AVAVIQALQD----VLTPQGTLVMPthSsdl 82  Deinococcus radiodu...
16079222   1 MKKIVESTTFPRTKQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGG--AVAVIQALID----VVTEEGTIVMPsqSvel 74  Bacillus subtilis
15895465   1 MNFLYEFSNKKISSEDFKLAFKKLGIKEGDVVFLHSDITVFGKLILTd-RKKFFNDILSsvkdVVGKKGVVIMP--T--- 74  Clostridium acetobu...
15792619   1 MKYFLEHNGKKYSDKDLIDAFYQLGIKRGDILCVHTELMKFGKALLT--KNDFLKTLLEcffkVLGKEGTLLMP--T--- 73  Campylobacter jejuni
15792620   2 KGAKADIFLKENSSCFGKDSVYEILTREGGKFMLLGLNYGHALTHYAeeRNTSFCRYFKefkgFVIDELGQKRE------ 75  Campylobacter jejuni
15792621   1 MKYLLEFENKKYSTYDFIETFYKLGLQKGDTLCVHTELFNFGFPLLS--RNEFLQTILDcffeVIGKEGTLIMP--T--- 73  Campylobacter jejuni
15807028   1 -----------MTAADLDRGLDSLGLDGTQNVIVHASLRSFGQLEGG--ARTVVDELERrtstLVAPAFTYATL------ 61  Deinococcus radiodu...
15966041   1 -----MTQQNEWRASEIVDQLIALGVKPGGVLLVHCSFRSVRPVEGG--PPGVIAALRA----AIGPEGTLVMP------ 63  Sinorhizobium meliloti
17229020   3 EAKVIVNTSSPRTRQSLATDLFNAGLNSSMTVIVHSSLSSLGWVCGG--SVAVVQALMD----VITPAGNLIMPthSgdl 76  Nostoc sp. PCC 7120
16800887   3 EKMAIWRTKKPATKQKIVSDLKKAGIKEGDTVIFHASMSKAHWICGG--PVAVIYALQE----TVGINGNIVMPaqTgql 76  Listeria innocua
13475254 644 asttgksGKGAEFRDELEQLIEYIENKAPSTVVLHSSLVALRNMTPKeiTTILLEGIER-----VSASSTVILPa----- 713 Mesorhizobium loti
15805626  83 tdpagwlsppvpeawWEVIRAELPAFDPALTP---TRGMGRIPELFRTWPGVRRSDHPHSSFAAWGRHAEFVTAGHALAF 159 Deinococcus radiodu...
16079222  75 sdpkewgnppvpeewWDIIRESMPAYNSNYTPt--TRGMGQIVELFRSYPEVKRSNHPNYSFVAWGKHKNKILNQHPLEF 152 Bacillus subtilis
15895465  75 ---------------FSYSFCNGEVFDVKKTK----GTVGALNEFFRKSEDTVRTVQPIFSCSVWGERKNEFLNISLDSF 135 Clostridium acetobu...
15792619  74 ---------------FTYSFCKNEVYDKVHSK----GKVGVLNEFFRTSGGGRLGELATLFFPLL--------------- 119 Campylobacter jejuni
15792620  76 ------------------KRINYYVRDLEKAY---VCSLDKINEIVRQTRYYKSIKFAGDFLESYDAKEYVKAIGNALKQ 134 Campylobacter jejuni
15792621  74 ---------------FTYSFCKNEVYDKINSK----TKMGALNEYFRKQTGVKRTNDPIFSFAIKGAKEELFLKDTTSCF 134 Campylobacter jejuni
15807028  62 -----------------LSRPSSPVRASFNRDsrvSRDIGRVPQEMVERAAARRSFHPALSFVALGQEAERVTAAQTLDS 124 Deinococcus radiodu...
15966041  64 ----------------SWSGLDDEPFDPAATPa--TPDLGIVADTFWRLENVTRSDHP-FAFAATGPLAARITSDSLPLP 124 Sinorhizobium meliloti
17229020  77 sdpaiwqqppvprewWTIIRETMPAFDPKVTP---TRGMGQIVETFRTWENVRRSSHPQLSFAAWGKDAENIISHHSLDY 153 Nostoc sp. PCC 7120
16800887  77 sdpakwenppvpeswWKIIRAETPPFDPLVTP---TRSMGVIAETFRAMPDVARSFHPYHSFCAWGKDKEEILAHQPLSK 153 Listeria innocua
13475254 714 ---------------FTPSYCTTQRFHWTETR----SEAGVLADLVMRELPAGRTKHPAYSMVVTGLRAQELCEADWWKC 774 Mesorhizobium loti
15805626 160 s-lGEGSPLARIYDLNGRVLLLGT--ERNTNLHLAEVRA-------GVRPTVAVSGPVMV----DGERQWLTFDEPDYD- 224 Deinococcus radiodu...
16079222 153 g-lGEQSPLGKLYIRESYVLLLGAdfDSSTCFHLAEYRI-------PYQKIINRGAPIIV----EGKRVWKEYKELEFR- 219 Bacillus subtilis
15895465 136 ---GQDSIFDKLFKSNGKLLFLGAdfHSCTYLHYIEQSFgipyrylKIFKGKIKDGENE-----YLSECKFYVRYLDKNv 207 Clostridium acetobu...
15792619     --------------------------------------------------------------------------------     Campylobacter jejuni
15792620 135 ---DKFAIYEKLLL------------------------------------------------------------------ 145 Campylobacter jejuni
15792621 135 ---GENCVYEVLTKENGKYMTFGG--QGHTLTHYAEEQFnvfyryhKIFSGILIDENNIS----YNKTISYYVRKLDISs 205 Campylobacter jejuni
15807028 125 ----PYQPIGALYDLDGYALLMGVdfGSNTTVHYGEHLAgmplltrWVPLDGQVSPTAFPncsaDFANLEPYVRGREVQv 200 Deinococcus radiodu...
15966041 125 p-hAPASPIGRIHELDGQVLLLGVehDSDTTLHLAELIA-------KVPYGVPRHCTVLD----NGKPIRVDYRENDHC- 191 Sinorhizobium meliloti
17229020 154 s-lGEKSPLARLYDLNAWVLLLGVgyENCTSFHLAEYRV-------GQAQEVRKGAPILE----AGRRVWKWFMDIDID- 220 Nostoc sp. PCC 7120
16800887 154 s-lGDDSPLGKLYQLSAKIILFGVdnNNNTSLHLAEERS-------NVFPLIENQAAFLK----QGEIVWEKYQEIDYN- 220 Listeria innocua
13475254 775 spfGDDSIFGLISQLGGFVMRLGT--PVVTHVHRCELLAqvpymktTDIEGVVDFGTGP-----LDASSPVYVRDVMGRp 847 Mesorhizobium loti
15805626 225 AEAFAPVKAA---FEAAGGVVRGTVGSAQARLMSQRELVDFAVNVWRVVrvPPHSSPS 279 Deinococcus radiodurans
16079222 220 EELFQEVGQA---FEAEHNMKVGKVGSANCRLFSLTEAVDFAEKWFINN--DSKNIKK 272 Bacillus subtilis
15895465 208 VLETERLKKH---LLEEKIMSETLVGDGSILSVDARKLYDEVFKMLKKD--IFYLLRE 260 Clostridium acetobutylicum
15792619     ----------------------------------------------------------     Campylobacter jejuni
15792620     ----------------------------------------------------------     Campylobacter jejuni
15792621 206 EPNLINIINI---VNNTKNFKKNNFAGDHINIYNAKEYIEILWKKLDIN--QTILIEN 258 Campylobacter jejuni
15807028 201 GPATLRLYRV---RDLVDETVRLLSHNPEALLCQIRGCRCQQVRELVREngLRPRHHQ 255 Deinococcus radiodurans
15966041 192 CQNFNLADAW---LRREGLQREGQVGHAHARLIRSRDIVRIASDRLARDplVFLHPIE 246 Sinorhizobium meliloti
17229020 221 NSCFLEMGEA---FEQTKRVQLSTVGSAQTKLFNMRNAVDFAVSWLRDH--PTYQEEV 273 Nostoc sp. PCC 7120
16800887 221 SEAFIALGRT---YEKERDFHPTTVIGAPTKIYNMRDLVDFGTDYFQTK--NH----- 268 Listeria innocua
13475254 848 EYRFLARDVArddYELKDVIRDFALGGTYARLVDVKDMESILVRAMRNEpyGFLREEG 905 Mesorhizobium loti
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