6A5O


Conserved Protein Domain Family
RNA_pol_N

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pfam01194: RNA_pol_N (this model, PSSM-Id:395951 is obsolete and has been replaced by 426114)
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RNA polymerases N / 8 kDa subunit
Statistics
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PSSM-Id: 395951
Aligned: 102 rows
Threshold Bit Score: 47.1086
Created: 22-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6A5O_J               1 MIIPVRCFSCGKVVGDKWDAYLRLL---EEGk------------------------QEGDALDELKLK-RYCCRRMVLTH 52  Komagatae...
P42488               1 MLIPVVCFTCGFPIGT----YAAIF---DKArteyiktkmdgtlpqnipldaslqiELKDLITALGIPmRVCCRTHLITT 73  African s...
WGS:AFBI:EDEG_01157  1 MIIPIRCFTCGREIASMYYQFLEMC---KENk------------------------NVGEVLDELDMK-LFCCRRMFIGN 52  Edhazardi...
Q8SRS6               1 MIIPIRCFTCGKEISSKWEPYQELL---KIDk------------------------GKAEALDELGMR-RICCRRMFLGH 52  Encephali...
EOB12178             1 MIIPVRCFTCNKEISSKWESYKFLI---KTEk------------------------TPADALDSLNLK-RICCRRMFLGH 52  Nosema bo...
ELQ76271             1 MLIPVRCFTCNKEISSLYEKYVLLL---KADy------------------------TECEAMDKLGIK-RMCCRRMVLCH 52  Trachiple...
XP_002649902         6 MIIPVRCFSCNKEISSKYEKYLELL---SRGv------------------------SPADALDQLGLT-RICCRRMYLGH 57  Enterocyt...
O55725               1 -mdPIRCFSCNKIMKSPNEKGMVFVrnmKKE-------------------------DREQFFKKFNYT-RLCCKRMYLSA 53  Invertebr...
XP_007605370         1 MIIPVRCFTCNKLIANVYEDYLQLL---RDGm------------------------HPNQALNKIGMA-RICCRRMVLGH 52  Vittaform...
EPR80151             1 MIIPVRCFSCGKEISSKWEEYINFL---KNDk------------------------SECEALDELKMT-RYCCRRMFLGH 52  Spraguea ...
6A5O_J              53 VDLIEKF 59  Komagataella phaffii GS115
P42488              74 LDYRKYy 80  African swine fever virus BA71V
WGS:AFBI:EDEG_01157 53 VEIIDKL 59  Edhazardia aedis USNM 41457
Q8SRS6              53 VDIVDKL 59  Encephalitozoon cuniculi GB-M1
EOB12178            53 VDIIDKL 59  Nosema bombycis CQ1
ELQ76271            53 VDIVDKL 59  Trachipleistophora hominis
XP_002649902        58 VDIGDQL 64  Enterocytozoon bieneusi H348
O55725              54 VNFQDEL 60  Invertebrate iridescent virus 6
XP_007605370        53 VDIADll 59  Vittaforma corneae ATCC 50505
EPR80151            53 VDIIEKL 59  Spraguea lophii 42_110
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