Conserved Protein Domain Family
Herpes_UL33

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pfam03581: Herpes_UL33 (this model, PSSM-Id:281567 is obsolete and has been replaced by 427377)
Herpesvirus UL33-like protein
This is a family of Herpesvirus proteins including UL33 and UL51. The proteins in this family are involved in packaging viral DNA.
Statistics
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PSSM-Id: 281567
Aligned: 10 rows
Threshold Bit Score: 88.1729
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9E6N6        45 IWFEYLI-PDEIDLIFPTTDGKLNYLSFTKRLASAIRYGRIKTAvsnnsssnsygstehvCDHGTSLCGRSERFASVINR 123 Marek's disease...
F5HGI9        76 LQFEPML-PRVYDLLLPSLDARLNFVNAGQKYAAFLKYVHGDCAt---------------CSHGEILREKTQLLTAIVSK 139 Human herpesvir...
Q69561        27 VVFYPML-PRLYEMMLPSLEARLNFLSVGYRHVAFARYVHGDVD----------------CVHREVMAQKMVLLTSILSK 89  Human herpesvir...
O36418         7 LDFPSIL-PEDIQVIAPTSYAKLSLLSHCQHLKLFIGQQGSKGV----------------CAHSRVLEEKLEAVKEVISK 69  Alcelaphine her...
YP_007474185  46 LSFSPMIhPNLAPLIAPSAYARLNLLNHCIFLEAFKEENSGQGLg---------------GVQREVLFLKRDIIKQVIAR 110 Epstein-Barr virus
Q66670        16 IDFQSML-PPDIKIIAPTTYTRLNLLNYCQFLELFMQLRASGCR----------------CEHGEILESKIRAVRQVISK 78  Equid herpesvir...
F5H9W4         3 yASDQLL-PRDMQILFPTIYCRLNAINYCQYLKTFLVQRAQPAA----------------CDHTLVLESKVDTVRQVLRK 65  Human herpesvir...
P89456        45 VWFEDMT-PAELEVIFPTTDAKLNYLSRTQRLASLLTYAGPIKApdgpaap---htqdtaCVHGELLARKRERFAAVINR 120 Human herpesvir...
Q6UDJ8        45 VWFFNVT-PPEMELALPTTDAKLNYLAHTANLASAVRYdcagd------------tdggrCVHARLLERRRERFAKILNK 111 Psittacid herpe...
P09281        75 VWFENLI-PPEIEAILPTTDAQLNYISFTSRLASVLKHKEsndsek--------sayvvpCEHSASVTRRRERFAGVMAK 145 Human herpesvir...
Q9E6N6       124 FLDLHQILK 132 Marek's disease herpesvirus type 1 strain MD5
F5HGI9       140 LMDINGILE 148 Human herpesvirus 5 strain Merlin
Q69561        90 LLNVNGILE 98  Human herpesvirus 6 (strain Uganda-1102)
O36418        70 IIETDKILE 78  Alcelaphine herpesvirus 1 strain C500
YP_007474185 111 IVAADSTLD 119 Epstein-Barr virus
Q66670        79 IVETDTVFN 87  Equid herpesvirus type 2 strain 86/87
F5H9W4        66 IVSTDAVFS 74  Human herpesvirus 8 strain GK18
P89456       121 FLDLHQILR 129 Human herpesvirus 2 strain HG52
Q6UDJ8       112 FLDLHQILG 120 Psittacid herpesvirus 1 Amazon parrot/1997
P09281       146 FLDLHEILK 154 Human herpesvirus 3 strain Dumas
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