2FJR


Conserved Protein Domain Family
Phage_CI_repr

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pfam07022: Phage_CI_repr 
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Bacteriophage CI repressor helix-turn-helix domain
This family consists of several phage CI repressor proteins and related bacterial sequences. The CI repressor is known to function as a transcriptional switch, determining whether transcription is lytic or lysogenic.
Statistics
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PSSM-Id: 311152
Aligned: 12 rows
Threshold Bit Score: 68.5099
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2FJR_A         9 DVLDRICEAYGFSQKIQLANHFDIASSSLS-------------------------------------------------- 38  Escherichia vir...
Q7MJL1         8 DVLSRLTKALGTSSDSELAQELGVAKQTIS-------------------------------------------------- 37  Vibrio vulnific...
Q8A2V9         9 GIVKRAKQALNFKKDSELASYLGVSRATLS-------------------------------------------------- 38  Bacteroides the...
Q9XJF9        16 AFTSKLKVITKCKDFFELGALLNIPKATFS-------------------------------------------------- 45  Vibrio virus K139
WP_010265817  12 ARIRSQMDRIGINAR-ELADRASVGKSFVYd------------------------------------------------- 41  Anaplasma margi...
Q6K1G0        16 GVLERLMSAYGVKMQKDLADLLGIAKHSVSgwvqrdaipgnvivrccldtgadinwlvngelananyeragcklkgkely 95  Salmonella viru...
AAA23390      20 AAIERLVEAYGFTTRQALADHLEVSKSTLA-------------------------------------------------- 49 
WP_001047327   9 GAIERMVEAYGFKTRQALCDHLGISKSTLA-------------------------------------------------- 38  Enterobacteriaceae
Q4AAY3        14 DAINRLIKAYNFSSRQQLCEHLEVSKSTMA-------------------------------------------------- 43  Salmonella ente...
Q7NAA6        18 QAIERLVSAYGFKSRQALSDHLGVSKSTMA-------------------------------------------------- 47  Photorhabdus la...
P79673         6 EVINRIVKAYGFANRKLLAEHLGMPHSTFG-------------------------------------------------- 35  Haemophilus pha...
Q66BK0        23 AAVERMMQAYGFKVQRELATYLGAGTGTIS-------------------------------------------------- 52  Yersinia pseudo...
2FJR_A        39 ---------------------------------------NRYTRGAIS-YDFAAHCALETGANLQWLLTGEGEAF 73  Escherichia virus 186
Q7MJL1        38 ---------------------------------------TWKKRNKVP-LEQIVEISVEHNLSIDDILFGDKLSY 72  Vibrio vulnificus YJ016
Q8A2V9        39 ---------------------------------------NWCARNR---IDFHLLLNKMRDVDLNWLLVGKGTPR 71  Bacteroides thetaiot...
Q9XJF9        46 ---------------------------------------TWNTHDRTS-HELMVRLHLALGIPIEELALKPEDLK 80  Vibrio virus K139
WP_010265817  42 ---------------------------------------ILSGKSSNPtSKKLMAIAEVLQVPLAYLVGSDDGLY 77  Anaplasma marginale
Q6K1G0        96 deimtnggktvlrrildaygftmqkelgdllgissgtisTWVRRDFFP-GDVVVTCALDTDTSLEWLATGKGQMR 169 Salmonella virus PsP3
AAA23390      50 ---------------------------------------NRYLRDTFP-ADWIIQCALETGTSLKWLTTGQGLKQ 84 
WP_001047327  39 ---------------------------------------TRYMRDSFP-AEWVIQCALETGTSLNWLTTGHGSKQ 73  Enterobacteriaceae
Q4AAY3        44 ---------------------------------------NRYLRDSFP-AEWVIQCALETGISLLWLATGQGDMY 78  Salmonella enterica ...
Q7NAA6        48 ---------------------------------------NRYLRDSFP-ADWVIQCNLETNASLLWLSTGQGEMF 82  Photorhabdus laumond...
P79673        36 ---------------------------------------TWASRGFFP-AELVIRCVKETGARLDYVAYGNEPIF 70  Haemophilus phage S2
Q66BK0        53 ---------------------------------------TWIKRDYFP-GKEIVLCALETGVSLHWLATGEGEPQ 87  Yersinia pseudotuber...
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